RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 TMEM170BQ5T4T1 132 aa11.8□□□□□ -0.52
NLE1-202ENST00000442241 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
NLE1-202ENST00000442241 PPP1R17O96001 155 aa11.8□□□□□ -0.52
NLE1-202ENST00000442241 VCX2Q9H322 139 aa11.8□□□□□ -0.52
NLE1-202ENST00000442241 RNASE13Q5GAN3 156 aaKnown RBP11.79□□□□□ -0.52
NLE1-202ENST00000442241 LYRM7Q5U5X0 104 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
NLE1-202ENST00000442241 SCGB1D4Q6XE38 83 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 TSPEAR-AS2P59090 65 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 SRSF9Q13242 221 aaKnown RBP eCLIP11.79□□□□□ -0.52
NLE1-202ENST00000442241 ITPR2Q14571 2701 aa11.79□□□□□ -0.52
NLE1-202ENST00000442241 TCL1BO95988 128 aa11.78□□□□□ -0.52
NLE1-202ENST00000442241 RNF183Q96D59 192 aa11.78□□□□□ -0.52
NLE1-202ENST00000442241 ODF3Q96PU9 254 aa11.78□□□□□ -0.52
NLE1-202ENST00000442241 TRBV20-1A0A075B6N2 111 aa11.77□□□□□ -0.52
NLE1-202ENST00000442241 IGHV3OR16-12A0A075B7B8 117 aa11.77□□□□□ -0.52
NLE1-202ENST00000442241 TRBV27A0A0K0K1C4 114 aa11.77□□□□□ -0.52
NLE1-202ENST00000442241 H3BMM0 161 aa11.77□□□□□ -0.52
NLE1-202ENST00000442241 PMVKQ15126 192 aa11.77□□□□□ -0.52
NLE1-202ENST00000442241 Q6ZSN1 163 aa11.77□□□□□ -0.52
NLE1-202ENST00000442241 DYNLRB2Q8TF09 96 aa11.77□□□□□ -0.53
NLE1-202ENST00000442241 A0A0J9YY99 117 aa11.76□□□□□ -0.53
NLE1-202ENST00000442241 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
NLE1-202ENST00000442241 MAP6D1Q9H9H5 199 aa11.75□□□□□ -0.53
NLE1-202ENST00000442241 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 A8MWV9 139 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 Q6ZSV7 163 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 TRPT1Q86TN4 253 aaKnown RBP11.74□□□□□ -0.53
NLE1-202ENST00000442241 RNF152Q8N8N0 203 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 XCL2Q9UBD3 114 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 CFC1BP0CG36 223 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 CFC1P0CG37 223 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 LINC01587Q99440 93 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 TRGV11A0A075B6L2 103 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 IGHV3-30P01768 117 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 IGHV3-30-5P0DP03 117 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
NLE1-202ENST00000442241 CITED1Q99966 193 aa11.73□□□□□ -0.53
NLE1-202ENST00000442241 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
NLE1-202ENST00000442241 C2CD3Q4AC94 2353 aa11.73□□□□□ -0.53
NLE1-202ENST00000442241 TRBV6-5A0A0K0K1A5 114 aa11.73□□□□□ -0.53
NLE1-202ENST00000442241 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 DNAJC9-AS1A6NH13 148 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 CD28P10747 220 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 C4orf3Q8WVX3 66 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 ANAPC13Q9BS18 74 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 PDZD2O15018 2839 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 TMEM262E9PQX1 116 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 I3L3M4 83 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
NLE1-202ENST00000442241 DEFB114Q30KQ6 69 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 TIMM17AQ99595 171 aa11.72□□□□□ -0.53
NLE1-202ENST00000442241 M0QXV9 152 aa11.71□□□□□ -0.53
NLE1-202ENST00000442241 ZFAND6Q6FIF0 208 aa11.71□□□□□ -0.53
NLE1-202ENST00000442241 TMEM141Q96I45 108 aa11.71□□□□□ -0.53
NLE1-202ENST00000442241 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
NLE1-202ENST00000442241 PEMTQ9UBM1 199 aa11.71□□□□□ -0.53
NLE1-202ENST00000442241 ADARB2-AS1A8MUL3 147 aa11.71□□□□□ -0.54
NLE1-202ENST00000442241 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.54
NLE1-202ENST00000442241 Q8N2B8 174 aa11.71□□□□□ -0.54
NLE1-202ENST00000442241 C20orf203Q8NBC4 194 aa11.71□□□□□ -0.54
NLE1-202ENST00000442241 HERVK_113P61574 105 aa11.7□□□□□ -0.54
NLE1-202ENST00000442241 ANK3Q12955 4377 aaKnown RBP11.7□□□□□ -0.54
NLE1-202ENST00000442241 AMELXQ99217 191 aa11.7□□□□□ -0.54
NLE1-202ENST00000442241 PRO1854Q9UHT4 67 aa11.7□□□□□ -0.54
NLE1-202ENST00000442241 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
NLE1-202ENST00000442241 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
NLE1-202ENST00000442241 IGLV4-3A0A075B6K6 122 aa11.69□□□□□ -0.54
NLE1-202ENST00000442241 NHLRC4P0CG21 123 aaPredicted RBP11.69□□□□□ -0.54
NLE1-202ENST00000442241 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
NLE1-202ENST00000442241 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
NLE1-202ENST00000442241 GAGE5Q13069 117 aa11.68□□□□□ -0.54
NLE1-202ENST00000442241 GAGE6Q13070 117 aa11.68□□□□□ -0.54
NLE1-202ENST00000442241 TNFRSF18Q9Y5U5 241 aa11.68□□□□□ -0.54
NLE1-202ENST00000442241 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
NLE1-202ENST00000442241 SPXQ9BT56 116 aa11.68□□□□□ -0.54
NLE1-202ENST00000442241 J3QQQ9 107 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 M0R2P5 195 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 SLC25A20O43772 301 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 IGHV3-53P01767 116 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 HELZ2Q9BYK8 2649 aaKnown RBP11.67□□□□□ -0.54
NLE1-202ENST00000442241 A8MZ25 164 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
NLE1-202ENST00000442241 SS18L2Q9UHA2 77 aa11.67□□□□□ -0.54
NLE1-202ENST00000442241 RHODO00212 210 aa11.66□□□□□ -0.54
NLE1-202ENST00000442241 RHOHQ15669 191 aa11.66□□□□□ -0.54
NLE1-202ENST00000442241 LRRC75A-AS1Q8N1F1 130 aa11.66□□□□□ -0.54
NLE1-202ENST00000442241 TRAV8-3A0A0A6YYJ7 113 aa11.66□□□□□ -0.54
NLE1-202ENST00000442241 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
NLE1-202ENST00000442241 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
NLE1-202ENST00000442241 ZNF22P17026 224 aaPredicted RBP11.66□□□□□ -0.54
NLE1-202ENST00000442241 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
NLE1-202ENST00000442241 ZNF415Q09FC8 603 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms