RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 VWCEQ96DN2 955 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 ALPK3Q96L96 1907 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 MSRB1Q9NZV6 116 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 MUC7Q8TAX7 377 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 UBE2D2P62837 147 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 NRACQ8N912 160 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 COL4A1P02462 1669 aa8.85□□□□□ -0.99
PTCH1-209ENST00000437951 IGHV3-33P01772 117 aa8.84□□□□□ -0.99
PTCH1-209ENST00000437951 GPR179Q6PRD1 2367 aa8.84□□□□□ -0.99
PTCH1-209ENST00000437951 TTTY13Q9BZ97 58 aa8.84□□□□□ -0.99
PTCH1-209ENST00000437951 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
PTCH1-209ENST00000437951 BDP1A6H8Y1 2624 aa8.84□□□□□ -0.99
PTCH1-209ENST00000437951 IGKV1-17P01599 117 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 U3KQK5 164 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 ZFAND2AQ8N6M9 145 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 LST1O00453 97 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 MRPS12O15235 138 aaKnown RBP8.83□□□□□ -1
PTCH1-209ENST00000437951 Q6ZSR3 168 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 SNURFQ9Y675 71 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 LY6HO94772 140 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 CTSGP08311 255 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 LOXL1Q08397 574 aaPredicted RBP8.83□□□□□ -1
PTCH1-209ENST00000437951 ACACBO00763 2458 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 IGFL3Q6UXB1 125 aa8.83□□□□□ -1
PTCH1-209ENST00000437951 ZFYVE26Q68DK2 2539 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 PATE2Q6UY27 113 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 GPHB5Q86YW7 130 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 DHRS4-AS1Q9P1J3 65 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 LRRK2Q5S007 2527 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 PTPRBP23467 1997 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 KRTAP27-1Q3LI81 207 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
PTCH1-209ENST00000437951 CACNA1AO00555 2505 aa8.81□□□□□ -1
PTCH1-209ENST00000437951 PLA2G2EQ9NZK7 142 aa8.81□□□□□ -1
PTCH1-209ENST00000437951 WFDC10AQ9H1F0 79 aa8.81□□□□□ -1
PTCH1-209ENST00000437951 F8W735 103 aaPredicted RBP8.81□□□□□ -1
PTCH1-209ENST00000437951 IGHV3-30P01768 117 aa8.81□□□□□ -1
PTCH1-209ENST00000437951 CCKP06307 115 aa8.81□□□□□ -1
PTCH1-209ENST00000437951 IGHV3-30-5P0DP03 117 aa8.81□□□□□ -1
PTCH1-209ENST00000437951 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
PTCH1-209ENST00000437951 COX17Q14061 63 aa8.8□□□□□ -1
PTCH1-209ENST00000437951 IGHV7-81A0A0B4J1V7 117 aa8.8□□□□□ -1
PTCH1-209ENST00000437951 COL4A5P29400 1685 aa8.8□□□□□ -1
PTCH1-209ENST00000437951 PRO0628Q9UI54 55 aa8.8□□□□□ -1
PTCH1-209ENST00000437951 UBE2D4Q9Y2X8 147 aa8.8□□□□□ -1
PTCH1-209ENST00000437951 ZNF524Q96C55 264 aa8.79□□□□□ -1
PTCH1-209ENST00000437951 RSPO1Q2MKA7 263 aaPredicted RBP8.79□□□□□ -1
PTCH1-209ENST00000437951 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
PTCH1-209ENST00000437951 WT1P19544 449 aaPredicted RBP8.79□□□□□ -1
PTCH1-209ENST00000437951 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
PTCH1-209ENST00000437951 DIAPH2-AS1Q14236 149 aa8.79□□□□□ -1
PTCH1-209ENST00000437951 PTPRSQ13332 1948 aa8.79□□□□□ -1
PTCH1-209ENST00000437951 A0A0J9YX75 114 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 YPEL4Q96NS1 127 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
PTCH1-209ENST00000437951 XGP55808 180 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
PTCH1-209ENST00000437951 PRO0255Q9UI72 69 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 TTC28Q96AY4 2481 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 PYGO1Q9Y3Y4 419 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
PTCH1-209ENST00000437951 DEFB113Q30KQ7 82 aa8.78□□□□□ -1
PTCH1-209ENST00000437951 C11orf1Q9H5F2 150 aa8.77□□□□□ -1
PTCH1-209ENST00000437951 IGHV4-59P01825 116 aa8.77□□□□□ -1.01
PTCH1-209ENST00000437951 C4orf3Q8WVX3 66 aa8.77□□□□□ -1.01
PTCH1-209ENST00000437951 C9orf85Q96MD7 179 aa8.77□□□□□ -1.01
PTCH1-209ENST00000437951 IGLV2-23P01705 113 aa8.76□□□□□ -1.01
PTCH1-209ENST00000437951 AJUBAQ96IF1 538 aa8.76□□□□□ -1.01
PTCH1-209ENST00000437951 PRYO14603 147 aa8.76□□□□□ -1.01
PTCH1-209ENST00000437951 PRORYQ9H606 182 aa8.76□□□□□ -1.01
PTCH1-209ENST00000437951 APRG1Q8IVJ8 170 aa8.76□□□□□ -1.01
PTCH1-209ENST00000437951 C5orf56Q8N8D9 126 aa8.76□□□□□ -1.01
PTCH1-209ENST00000437951 ZNF22P17026 224 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-209ENST00000437951 C11orf53Q8IXP5 236 aa8.75□□□□□ -1.01
PTCH1-209ENST00000437951 NRGNQ92686 78 aa8.75□□□□□ -1.01
PTCH1-209ENST00000437951 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-209ENST00000437951 EBI3Q14213 229 aa8.75□□□□□ -1.01
PTCH1-209ENST00000437951 SCXQ7RTU7 201 aa8.75□□□□□ -1.01
PTCH1-209ENST00000437951 KLK12Q9UKR0 248 aa8.75□□□□□ -1.01
PTCH1-209ENST00000437951 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
PTCH1-209ENST00000437951 C2orf91Q6ZV80 131 aa8.74□□□□□ -1.01
PTCH1-209ENST00000437951 REG3AQ06141 175 aa8.74□□□□□ -1.01
PTCH1-209ENST00000437951 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
PTCH1-209ENST00000437951 INSL3P51460 131 aa8.74□□□□□ -1.01
PTCH1-209ENST00000437951 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 NOTCH2Q04721 2471 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 SLURP1P55000 103 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 PROK2Q9HC23 129 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 PRAC2D3DTV9 90 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 CXCL6P80162 114 aa8.73□□□□□ -1.01
PTCH1-209ENST00000437951 ZNF503-AS2A6NEH8 195 aa8.72□□□□□ -1.01
PTCH1-209ENST00000437951 IGLV2-8P01709 118 aa8.72□□□□□ -1.01
PTCH1-209ENST00000437951 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
PTCH1-209ENST00000437951 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
PTCH1-209ENST00000437951 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms