RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 TMEM243Q9BU79 118 aa12.76□□□□□ -0.37
PPP1CB-206ENST00000427786 EIF5A2Q9GZV4 153 aaKnown RBP12.76□□□□□ -0.37
PPP1CB-206ENST00000427786 IGLV4-60A0A075B6I1 120 aa12.75□□□□□ -0.37
PPP1CB-206ENST00000427786 A8MWL6 223 aa12.75□□□□□ -0.37
PPP1CB-206ENST00000427786 INAFM2P0DMQ5 153 aa12.75□□□□□ -0.37
PPP1CB-206ENST00000427786 GFRA4Q9GZZ7 299 aa12.75□□□□□ -0.37
PPP1CB-206ENST00000427786 USP17L23D6RBM5 183 aa12.74□□□□□ -0.37
PPP1CB-206ENST00000427786 HLA-DQA1P01909 254 aa12.74□□□□□ -0.37
PPP1CB-206ENST00000427786 C14orf177Q52M58 125 aa12.74□□□□□ -0.37
PPP1CB-206ENST00000427786 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
PPP1CB-206ENST00000427786 REG3AQ06141 175 aa12.73□□□□□ -0.37
PPP1CB-206ENST00000427786 COTL1Q14019 142 aa12.73□□□□□ -0.37
PPP1CB-206ENST00000427786 DEFB104AQ8WTQ1 72 aa12.73□□□□□ -0.37
PPP1CB-206ENST00000427786 FAM229AH3BQW9 127 aa12.72□□□□□ -0.37
PPP1CB-206ENST00000427786 SCXQ7RTU7 201 aa12.72□□□□□ -0.37
PPP1CB-206ENST00000427786 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
PPP1CB-206ENST00000427786 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
PPP1CB-206ENST00000427786 PRSS1P07477 247 aa12.71□□□□□ -0.37
PPP1CB-206ENST00000427786 AMTP48728 403 aa12.71□□□□□ -0.37
PPP1CB-206ENST00000427786 TSKUQ8WUA8 353 aa12.71□□□□□ -0.37
PPP1CB-206ENST00000427786 FAM231BA6NCW3 169 aa12.7□□□□□ -0.38
PPP1CB-206ENST00000427786 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
PPP1CB-206ENST00000427786 SMIM15Q7Z3B0 74 aa12.7□□□□□ -0.38
PPP1CB-206ENST00000427786 TRAV8-4A0A0B4J246 113 aa12.69□□□□□ -0.38
PPP1CB-206ENST00000427786 TEX261Q6UWH6 196 aa12.69□□□□□ -0.38
PPP1CB-206ENST00000427786 V9GYV3 84 aa12.69□□□□□ -0.38
PPP1CB-206ENST00000427786 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 TRBV6-5A0A0K0K1A5 114 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 C9JQL5 133 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 NCR2O95944 276 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 ISOC2Q96AB3 205 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 CHAC1Q9BUX1 264 aa12.68□□□□□ -0.38
PPP1CB-206ENST00000427786 A0A1B0GUT8 65 aa12.67□□□□□ -0.38
PPP1CB-206ENST00000427786 SDHAF1A6NFY7 115 aa12.67□□□□□ -0.38
PPP1CB-206ENST00000427786 LINC00528Q8N1L1 170 aa12.67□□□□□ -0.38
PPP1CB-206ENST00000427786 RNF185Q96GF1 192 aa12.67□□□□□ -0.38
PPP1CB-206ENST00000427786 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
PPP1CB-206ENST00000427786 UBE2L6O14933 153 aa12.66□□□□□ -0.38
PPP1CB-206ENST00000427786 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
PPP1CB-206ENST00000427786 RPL23P62829 140 aaKnown RBP12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 SRSF3P84103 164 aaKnown RBP12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 C9orf163Q8N9P6 203 aa12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 CIRBP-AS1Q8TBR5 109 aa12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 BORCS7Q96B45 105 aa12.65□□□□□ -0.38
PPP1CB-206ENST00000427786 APCSP02743 223 aa12.64□□□□□ -0.39
PPP1CB-206ENST00000427786 KRTAP10-4P60372 401 aaPredicted RBP12.64□□□□□ -0.39
PPP1CB-206ENST00000427786 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 IGKV2-29A2NJV5 120 aaPredicted RBP12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 H7C423 109 aa12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 RAB4AP20338 218 aa12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 RPS10P46783 165 aaKnown RBP12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 CLRN3Q8NCR9 226 aa12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 NUP35Q8NFH5 326 aa12.63□□□□□ -0.39
PPP1CB-206ENST00000427786 DMBT1Q9UGM3 2413 aaPredicted RBP12.62□□□□□ -0.39
PPP1CB-206ENST00000427786 TSHBP01222 138 aa12.62□□□□□ -0.39
PPP1CB-206ENST00000427786 ESDP10768 282 aa12.62□□□□□ -0.39
PPP1CB-206ENST00000427786 CNBPP62633 177 aaKnown RBP12.62□□□□□ -0.39
PPP1CB-206ENST00000427786 AMN1Q8IY45 258 aa12.62□□□□□ -0.39
PPP1CB-206ENST00000427786 I3L3M4 83 aa12.61□□□□□ -0.39
PPP1CB-206ENST00000427786 PLA2G1BP04054 148 aaKnown RBP12.61□□□□□ -0.39
PPP1CB-206ENST00000427786 FGF6P10767 208 aa12.61□□□□□ -0.39
PPP1CB-206ENST00000427786 POLR2KP53803 58 aaKnown RBP12.61□□□□□ -0.39
PPP1CB-206ENST00000427786 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
PPP1CB-206ENST00000427786 NAT8Q9UHE5 227 aa12.61□□□□□ -0.39
PPP1CB-206ENST00000427786 PKHD1L1Q86WI1 4243 aa12.6□□□□□ -0.39
PPP1CB-206ENST00000427786 SMDT1Q9H4I9 107 aa12.6□□□□□ -0.39
PPP1CB-206ENST00000427786 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 SLPIP03973 132 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 ZNF25P17030 456 aaPredicted RBP12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 RIGQ13278 110 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 ADIRFQ15847 76 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 SDIM1Q6ZPB5 146 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 C15orf56Q8N910 161 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 TMEM242Q9NWH2 141 aa12.59□□□□□ -0.39
PPP1CB-206ENST00000427786 PANO1I0J062 215 aa12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 PMCHP20382 165 aa12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 PEA15Q15121 130 aa12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 NRACQ8N912 160 aa12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 NAT8BQ9UHF3 227 aa12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.58□□□□□ -0.4
PPP1CB-206ENST00000427786 hDV102S1A0JD36 115 aa12.57□□□□□ -0.4
PPP1CB-206ENST00000427786 GAGE12HA6NDE8 117 aa12.57□□□□□ -0.4
PPP1CB-206ENST00000427786 RNASEKQ6P5S7 137 aaKnown RBP12.57□□□□□ -0.4
PPP1CB-206ENST00000427786 FAT3Q8TDW7 4589 aa12.57□□□□□ -0.4
PPP1CB-206ENST00000427786 LRP1Q07954 4544 aaKnown RBP12.56□□□□□ -0.4
PPP1CB-206ENST00000427786 SMKR1H3BMG3 65 aa12.56□□□□□ -0.4
PPP1CB-206ENST00000427786 CIRBPQ14011 172 aaKnown RBP12.56□□□□□ -0.4
PPP1CB-206ENST00000427786 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
PPP1CB-206ENST00000427786 MRPL52Q86TS9 123 aaKnown RBP12.55□□□□□ -0.4
PPP1CB-206ENST00000427786 OR5A1Q8NGJ0 315 aa12.55□□□□□ -0.4
PPP1CB-206ENST00000427786 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
PPP1CB-206ENST00000427786 FOXI1Q12951 378 aa12.53□□□□□ -0.4
PPP1CB-206ENST00000427786 FAM104BQ5XKR9 115 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms