RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
NDUFA3-208ENST00000422029 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
NDUFA3-208ENST00000422029 PRR34Q9NV39 138 aa7.27□□□□□ -1.25
NDUFA3-208ENST00000422029 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 PDE6DO43924 150 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 SLPIP03973 132 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 CEBPGP53567 150 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 BLOC1S1P78537 153 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 IQCJQ1A5X6 159 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
NDUFA3-208ENST00000422029 C9JQL5 133 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 P01737 135 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 NTF3P20783 257 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 FOXA3P55318 350 aaPredicted RBP7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 TMEM97Q5BJF2 176 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 DGAT2L7PQ6IED9 249 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 OCC1Q8TAD7 63 aa7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 RNASE7Q9H1E1 156 aaKnown RBP7.25□□□□□ -1.25
NDUFA3-208ENST00000422029 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 H7C1H1 209 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 OXTP01178 125 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 AMTP48728 403 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 RPS20P60866 119 aaKnown RBP7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 PKIAP61925 76 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 CACNG7P62955 275 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 SRSF3P84103 164 aaKnown RBP7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 TWIST1Q15672 202 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 NUDT10Q8NFP7 164 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 LRP1Q07954 4544 aaKnown RBP7.24□□□□□ -1.25
NDUFA3-208ENST00000422029 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
NDUFA3-208ENST00000422029 SERTAD4-AS1Q5TG53 156 aa7.23□□□□□ -1.25
NDUFA3-208ENST00000422029 TEX261Q6UWH6 196 aa7.23□□□□□ -1.25
NDUFA3-208ENST00000422029 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
NDUFA3-208ENST00000422029 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
NDUFA3-208ENST00000422029 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
NDUFA3-208ENST00000422029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 IGKV2-29A2NJV5 120 aaPredicted RBP7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 UBE2L6O14933 153 aa7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 SRP19P09132 144 aaKnown RBP7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 GATD1Q8NB37 220 aa7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 FAM210AQ96ND0 272 aa7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 DPH3P1Q9H4G8 78 aa7.22□□□□□ -1.25
NDUFA3-208ENST00000422029 A0A087WYN8 130 aa7.21□□□□□ -1.26
NDUFA3-208ENST00000422029 F2Z2F3 143 aa7.21□□□□□ -1.26
NDUFA3-208ENST00000422029 TRGC1P0CF51 173 aa7.21□□□□□ -1.26
NDUFA3-208ENST00000422029 COTL1Q14019 142 aa7.21□□□□□ -1.26
NDUFA3-208ENST00000422029 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
NDUFA3-208ENST00000422029 IGHV3-64A0A075B6Q5 118 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 IGKV2-24A0A0C4DH68 120 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 XKRY2A2RUG3 117 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 TMEM250H0YL14 139 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 GAS8-AS1O95177 125 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 TAGLN2P37802 199 aaKnown RBP7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 COX6A2Q02221 97 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 RNASEKQ6P5S7 137 aaKnown RBP7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 C15orf56Q8N910 161 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 GTSF1Q8WW33 167 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 LINC00526Q96FQ7 95 aa7.2□□□□□ -1.26
NDUFA3-208ENST00000422029 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 A0A1B0GUV1 79 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 AMMECR1LQ6DCA0 310 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 SMIM7Q9BQ49 75 aa7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 RPP21Q9H633 154 aaKnown RBP7.19□□□□□ -1.26
NDUFA3-208ENST00000422029 PHOX2AO14813 284 aa7.18□□□□□ -1.26
NDUFA3-208ENST00000422029 CTRLP40313 264 aa7.18□□□□□ -1.26
NDUFA3-208ENST00000422029 CNBPP62633 177 aaKnown RBP7.18□□□□□ -1.26
NDUFA3-208ENST00000422029 MAJINQ3KP22 176 aa7.18□□□□□ -1.26
NDUFA3-208ENST00000422029 WDR73Q6P4I2 378 aa7.18□□□□□ -1.26
NDUFA3-208ENST00000422029 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
NDUFA3-208ENST00000422029 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.17□□□□□ -1.26
NDUFA3-208ENST00000422029 ZNF727A8MUV8 499 aa7.17□□□□□ -1.26
NDUFA3-208ENST00000422029 LINC01551Q86U37 167 aa7.17□□□□□ -1.26
NDUFA3-208ENST00000422029 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
NDUFA3-208ENST00000422029 GATCO43716 136 aaKnown RBP7.16□□□□□ -1.26
NDUFA3-208ENST00000422029 FGF6P10767 208 aa7.16□□□□□ -1.26
NDUFA3-208ENST00000422029 XCL1P47992 114 aa7.16□□□□□ -1.26
NDUFA3-208ENST00000422029 CIRBPQ14011 172 aaKnown RBP7.16□□□□□ -1.26
NDUFA3-208ENST00000422029 BIN3Q9NQY0 253 aa7.16□□□□□ -1.26
NDUFA3-208ENST00000422029 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.26
NDUFA3-208ENST00000422029 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
NDUFA3-208ENST00000422029 APCSP02743 223 aa7.15□□□□□ -1.26
NDUFA3-208ENST00000422029 PMCHP20382 165 aa7.15□□□□□ -1.26
NDUFA3-208ENST00000422029 IFITM2Q01629 132 aa7.15□□□□□ -1.26
NDUFA3-208ENST00000422029 FAM231BA6NCW3 169 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 RPS10P46783 165 aaKnown RBP7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 RPL23P62829 140 aaKnown RBP7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 STPG4Q8N801 248 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 TMEM242Q9NWH2 141 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
NDUFA3-208ENST00000422029 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms