RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 AMTP48728 403 aa10.75□□□□□ -0.69
DDX55-203ENST00000421670 TMEM97Q5BJF2 176 aa10.75□□□□□ -0.69
DDX55-203ENST00000421670 C18orf32Q8TCD1 76 aa10.75□□□□□ -0.69
DDX55-203ENST00000421670 KIR2DL4Q99706 377 aa10.75□□□□□ -0.69
DDX55-203ENST00000421670 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
DDX55-203ENST00000421670 PRSS47A8MTI9 375 aa10.74□□□□□ -0.69
DDX55-203ENST00000421670 TCAPO15273 167 aa10.74□□□□□ -0.69
DDX55-203ENST00000421670 FCER1GP30273 86 aa10.74□□□□□ -0.69
DDX55-203ENST00000421670 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
DDX55-203ENST00000421670 HYDINQ4G0P3 5121 aa10.74□□□□□ -0.69
DDX55-203ENST00000421670 TRAV8-6A0A0B4J262 113 aa10.73□□□□□ -0.69
DDX55-203ENST00000421670 Q8N3U1 123 aa10.73□□□□□ -0.69
DDX55-203ENST00000421670 Q8N8P6 123 aa10.73□□□□□ -0.69
DDX55-203ENST00000421670 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
DDX55-203ENST00000421670 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
DDX55-203ENST00000421670 CHCHD7Q9BUK0 85 aa10.73□□□□□ -0.69
DDX55-203ENST00000421670 DNAH6Q9C0G6 4158 aa10.72□□□□□ -0.69
DDX55-203ENST00000421670 SIVA1O15304 175 aa10.72□□□□□ -0.69
DDX55-203ENST00000421670 PRSS3P2Q8NHM4 247 aa10.72□□□□□ -0.69
DDX55-203ENST00000421670 NXT2Q9NPJ8 142 aaKnown RBP10.72□□□□□ -0.69
DDX55-203ENST00000421670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.71□□□□□ -0.69
DDX55-203ENST00000421670 IGKV2-29A2NJV5 120 aaPredicted RBP10.71□□□□□ -0.69
DDX55-203ENST00000421670 GAGE6Q13070 117 aa10.71□□□□□ -0.69
DDX55-203ENST00000421670 Q9H8V8 135 aa10.71□□□□□ -0.69
DDX55-203ENST00000421670 NIT1Q86X76 327 aa10.7□□□□□ -0.7
DDX55-203ENST00000421670 UBE2L6O14933 153 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 ESDP10768 282 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 MPV17L2Q567V2 206 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 URB1-AS1Q96HZ7 61 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 LCE6AA0A183 80 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 FA2HQ7L5A8 372 aa10.69□□□□□ -0.7
DDX55-203ENST00000421670 DNAH10OSP0CZ25 163 aa10.68□□□□□ -0.7
DDX55-203ENST00000421670 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
DDX55-203ENST00000421670 LAGE3Q14657 143 aa10.68□□□□□ -0.7
DDX55-203ENST00000421670 Q8N976 141 aa10.68□□□□□ -0.7
DDX55-203ENST00000421670 A0A087WX48 190 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BKO60814 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BJP06899 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BOP23527 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BBP33778 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BDP58876 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BCP62807 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST2H2BEQ16778 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 LINC01556Q5JQF7 62 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.67□□□□□ -0.7
DDX55-203ENST00000421670 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
DDX55-203ENST00000421670 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
DDX55-203ENST00000421670 C20orf203Q8NBC4 194 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BHQ93079 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BNQ99877 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 HIST1H2BMQ99879 126 aa10.67□□□□□ -0.7
DDX55-203ENST00000421670 DNAH10Q8IVF4 4471 aa10.66□□□□□ -0.7
DDX55-203ENST00000421670 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
DDX55-203ENST00000421670 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
DDX55-203ENST00000421670 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
DDX55-203ENST00000421670 LINC01546A6NGU7 62 aa10.65□□□□□ -0.7
DDX55-203ENST00000421670 K7EMI3 77 aa10.65□□□□□ -0.7
DDX55-203ENST00000421670 LINC00614P0C842 121 aa10.65□□□□□ -0.7
DDX55-203ENST00000421670 FGF6P10767 208 aa10.65□□□□□ -0.7
DDX55-203ENST00000421670 BAGE3Q86Y29 109 aa10.65□□□□□ -0.7
DDX55-203ENST00000421670 M0R2N4 97 aa10.65□□□□□ -0.71
DDX55-203ENST00000421670 BTF3P20290 206 aaKnown RBP10.65□□□□□ -0.71
DDX55-203ENST00000421670 RBX1P62877 108 aa10.65□□□□□ -0.71
DDX55-203ENST00000421670 Q0VG73 95 aa10.65□□□□□ -0.71
DDX55-203ENST00000421670 AMMECR1LQ6DCA0 310 aa10.65□□□□□ -0.71
DDX55-203ENST00000421670 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
DDX55-203ENST00000421670 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
DDX55-203ENST00000421670 C1orf196B1AJZ1 125 aa10.64□□□□□ -0.71
DDX55-203ENST00000421670 H7C423 109 aa10.64□□□□□ -0.71
DDX55-203ENST00000421670 PKIAP61925 76 aa10.64□□□□□ -0.71
DDX55-203ENST00000421670 PMCHL1Q16048 86 aa10.64□□□□□ -0.71
DDX55-203ENST00000421670 LINC00310P59036 64 aa10.63□□□□□ -0.71
DDX55-203ENST00000421670 RAB5BP61020 215 aa10.63□□□□□ -0.71
DDX55-203ENST00000421670 C2orf66Q6UXQ4 117 aa10.63□□□□□ -0.71
DDX55-203ENST00000421670 TMEM18Q96B42 140 aa10.63□□□□□ -0.71
DDX55-203ENST00000421670 UBE2D4Q9Y2X8 147 aa10.63□□□□□ -0.71
DDX55-203ENST00000421670 RYR2Q92736 4967 aa10.63□□□□□ -0.71
DDX55-203ENST00000421670 SERF1AO75920 110 aa10.62□□□□□ -0.71
DDX55-203ENST00000421670 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
DDX55-203ENST00000421670 KLK12Q9UKR0 248 aa10.62□□□□□ -0.71
DDX55-203ENST00000421670 CYSLTR1Q9Y271 337 aa10.62□□□□□ -0.71
DDX55-203ENST00000421670 A0A096LNJ9 63 aa10.61□□□□□ -0.71
DDX55-203ENST00000421670 A0A1B0GUV1 79 aa10.61□□□□□ -0.71
DDX55-203ENST00000421670 CLPSL2Q6UWE3 100 aa10.61□□□□□ -0.71
DDX55-203ENST00000421670 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
DDX55-203ENST00000421670 FRAS1Q86XX4 4008 aa10.61□□□□□ -0.71
DDX55-203ENST00000421670 ZNF25P17030 456 aaPredicted RBP10.6□□□□□ -0.71
DDX55-203ENST00000421670 TTC32Q5I0X7 151 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 CHCHD1Q96BP2 118 aaKnown RBP10.6□□□□□ -0.71
DDX55-203ENST00000421670 TRAV9-2A0A087WT02 112 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 NUPR1O60356 82 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 RNASE13Q5GAN3 156 aaKnown RBP10.6□□□□□ -0.71
DDX55-203ENST00000421670 Q6ZUT4 128 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms