RNA–Protein interactions for RNA: ENST00000416208.5

SCAP-203, Transcript of SREBF chaperone, humanhuman

TSL 5

Gene SCAP, Length 1,222 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-203ENST00000416208 GATD1Q8NB37 220 aa12.22□□□□□ -0.45
SCAP-203ENST00000416208 RPP21Q9H633 154 aaKnown RBP12.22□□□□□ -0.45
SCAP-203ENST00000416208 REG3AQ06141 175 aa12.21□□□□□ -0.45
SCAP-203ENST00000416208 ALKAL2Q6UX46 152 aa12.21□□□□□ -0.45
SCAP-203ENST00000416208 LYPD6BQ8NI32 183 aa12.21□□□□□ -0.45
SCAP-203ENST00000416208 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
SCAP-203ENST00000416208 hCG_2014768A0A024R1R8 64 aa12.2□□□□□ -0.46
SCAP-203ENST00000416208 TWIST1Q15672 202 aa12.2□□□□□ -0.46
SCAP-203ENST00000416208 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
SCAP-203ENST00000416208 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
SCAP-203ENST00000416208 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
SCAP-203ENST00000416208 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
SCAP-203ENST00000416208 RPL39LQ96EH5 51 aaKnown RBP12.19□□□□□ -0.46
SCAP-203ENST00000416208 SLPIP03973 132 aa12.18□□□□□ -0.46
SCAP-203ENST00000416208 TAGLN2P37802 199 aaKnown RBP12.18□□□□□ -0.46
SCAP-203ENST00000416208 AKAP14Q86UN6 197 aa12.18□□□□□ -0.46
SCAP-203ENST00000416208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.18□□□□□ -0.46
SCAP-203ENST00000416208 KRTAP29-1A8MX34 341 aaPredicted RBP12.17□□□□□ -0.46
SCAP-203ENST00000416208 GAS8-AS1O95177 125 aa12.17□□□□□ -0.46
SCAP-203ENST00000416208 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
SCAP-203ENST00000416208 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
SCAP-203ENST00000416208 TMEM250H0YL14 139 aa12.15□□□□□ -0.46
SCAP-203ENST00000416208 J3QL48 77 aa12.14□□□□□ -0.47
SCAP-203ENST00000416208 AMTP48728 403 aa12.14□□□□□ -0.47
SCAP-203ENST00000416208 HNRNPA3P51991 378 aaKnown RBP12.14□□□□□ -0.47
SCAP-203ENST00000416208 BLOC1S1P78537 153 aa12.14□□□□□ -0.47
SCAP-203ENST00000416208 COTL1Q14019 142 aa12.14□□□□□ -0.47
SCAP-203ENST00000416208 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
SCAP-203ENST00000416208 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
SCAP-203ENST00000416208 GATCO43716 136 aaKnown RBP12.13□□□□□ -0.47
SCAP-203ENST00000416208 TNXBP22105 4242 aa12.13□□□□□ -0.47
SCAP-203ENST00000416208 CNBPP62633 177 aaKnown RBP12.12□□□□□ -0.47
SCAP-203ENST00000416208 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.11□□□□□ -0.47
SCAP-203ENST00000416208 IGKV2-29A2NJV5 120 aaPredicted RBP12.11□□□□□ -0.47
SCAP-203ENST00000416208 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
SCAP-203ENST00000416208 C15orf56Q8N910 161 aa12.11□□□□□ -0.47
SCAP-203ENST00000416208 CLRN3Q8NCR9 226 aa12.11□□□□□ -0.47
SCAP-203ENST00000416208 hDV102S1A0JD36 115 aa12.1□□□□□ -0.47
SCAP-203ENST00000416208 UBE2L6O14933 153 aa12.1□□□□□ -0.47
SCAP-203ENST00000416208 CEBPGP53567 150 aa12.1□□□□□ -0.47
SCAP-203ENST00000416208 A0A1B0GVG6 124 aa12.09□□□□□ -0.47
SCAP-203ENST00000416208 GAGE12HA6NDE8 117 aa12.09□□□□□ -0.47
SCAP-203ENST00000416208 SDHAF1A6NFY7 115 aa12.09□□□□□ -0.47
SCAP-203ENST00000416208 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
SCAP-203ENST00000416208 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
SCAP-203ENST00000416208 IGKV3OR2-268A0A0C4DH90 116 aa12.08□□□□□ -0.48
SCAP-203ENST00000416208 A8MWL6 223 aa12.08□□□□□ -0.48
SCAP-203ENST00000416208 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
SCAP-203ENST00000416208 CT83Q5H943 113 aa12.08□□□□□ -0.48
SCAP-203ENST00000416208 RNF185Q96GF1 192 aa12.08□□□□□ -0.48
SCAP-203ENST00000416208 CHTF8P0CG12 524 aa12.07□□□□□ -0.48
SCAP-203ENST00000416208 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
SCAP-203ENST00000416208 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
SCAP-203ENST00000416208 TRBV6-5A0A0K0K1A5 114 aa12.06□□□□□ -0.48
SCAP-203ENST00000416208 NCR2O95944 276 aa12.06□□□□□ -0.48
SCAP-203ENST00000416208 FGF6P10767 208 aa12.06□□□□□ -0.48
SCAP-203ENST00000416208 RPS10P46783 165 aaKnown RBP12.06□□□□□ -0.48
SCAP-203ENST00000416208 SMIM7Q9BQ49 75 aa12.06□□□□□ -0.48
SCAP-203ENST00000416208 TSHBP01222 138 aa12.05□□□□□ -0.48
SCAP-203ENST00000416208 ESDP10768 282 aa12.05□□□□□ -0.48
SCAP-203ENST00000416208 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
SCAP-203ENST00000416208 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
SCAP-203ENST00000416208 EIF5A2Q9GZV4 153 aaKnown RBP12.05□□□□□ -0.48
SCAP-203ENST00000416208 UBR4Q5T4S7 5183 aa12.05□□□□□ -0.48
SCAP-203ENST00000416208 HIGD1CA8MV81 97 aa12.04□□□□□ -0.48
SCAP-203ENST00000416208 C9JQL5 133 aa12.04□□□□□ -0.48
SCAP-203ENST00000416208 APCSP02743 223 aa12.04□□□□□ -0.48
SCAP-203ENST00000416208 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
SCAP-203ENST00000416208 I3L3M4 83 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
SCAP-203ENST00000416208 RAB4AP20338 218 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 POLR2KP53803 58 aaKnown RBP12.03□□□□□ -0.48
SCAP-203ENST00000416208 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
SCAP-203ENST00000416208 TEX261Q6UWH6 196 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 OSTCQ9NRP0 149 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 TMEM242Q9NWH2 141 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 V9GYV3 84 aa12.03□□□□□ -0.48
SCAP-203ENST00000416208 IGHV3-64A0A075B6Q5 118 aa12.02□□□□□ -0.49
SCAP-203ENST00000416208 A0A1B0GUT8 65 aa12.02□□□□□ -0.49
SCAP-203ENST00000416208 ZNF727A8MUV8 499 aa12.02□□□□□ -0.49
SCAP-203ENST00000416208 H7C423 109 aa12.02□□□□□ -0.49
SCAP-203ENST00000416208 FOXI1Q12951 378 aa12.02□□□□□ -0.49
SCAP-203ENST00000416208 AMMECR1LQ6DCA0 310 aa12.02□□□□□ -0.49
SCAP-203ENST00000416208 A0A087WYN8 130 aa12.01□□□□□ -0.49
SCAP-203ENST00000416208 SMKR1H3BMG3 65 aa12.01□□□□□ -0.49
SCAP-203ENST00000416208 OXTP01178 125 aa12.01□□□□□ -0.49
SCAP-203ENST00000416208 PMCHP20382 165 aa12.01□□□□□ -0.49
SCAP-203ENST00000416208 AMN1Q8IY45 258 aa12.01□□□□□ -0.49
SCAP-203ENST00000416208 SPACA4Q8TDM5 124 aa12.01□□□□□ -0.49
SCAP-203ENST00000416208 NUP35Q8NFH5 326 aa12□□□□□ -0.49
SCAP-203ENST00000416208 ST20Q9HBF5 79 aa12□□□□□ -0.49
SCAP-203ENST00000416208 AP5S1Q9NUS5 200 aa12□□□□□ -0.49
SCAP-203ENST00000416208 SRSF3P84103 164 aaKnown RBP11.99□□□□□ -0.49
SCAP-203ENST00000416208 OR5A1Q8NGJ0 315 aa11.99□□□□□ -0.49
SCAP-203ENST00000416208 PRSS3P2Q8NHM4 247 aa11.99□□□□□ -0.49
SCAP-203ENST00000416208 ISOC2Q96AB3 205 aa11.99□□□□□ -0.49
SCAP-203ENST00000416208 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
SCAP-203ENST00000416208 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms