RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 GFRA4Q9GZZ7 299 aa17.21■□□□□ 0.35
VEGFA-207ENST00000413642 OSTCQ9NRP0 149 aa17.21■□□□□ 0.35
VEGFA-207ENST00000413642 FAT1Q14517 4588 aa17.21■□□□□ 0.35
VEGFA-207ENST00000413642 COTL1Q14019 142 aa17.2■□□□□ 0.34
VEGFA-207ENST00000413642 KRTAP26-1Q6PEX3 210 aa17.2■□□□□ 0.34
VEGFA-207ENST00000413642 TEX261Q6UWH6 196 aa17.2■□□□□ 0.34
VEGFA-207ENST00000413642 TSKUQ8WUA8 353 aa17.2■□□□□ 0.34
VEGFA-207ENST00000413642 HIGD1CA8MV81 97 aa17.19■□□□□ 0.34
VEGFA-207ENST00000413642 GAS8-AS1O95177 125 aa17.19■□□□□ 0.34
VEGFA-207ENST00000413642 AMTP48728 403 aa17.19■□□□□ 0.34
VEGFA-207ENST00000413642 FRZBQ92765 325 aa17.19■□□□□ 0.34
VEGFA-207ENST00000413642 USP17L23D6RBM5 183 aa17.18■□□□□ 0.34
VEGFA-207ENST00000413642 REG3AQ06141 175 aa17.18■□□□□ 0.34
VEGFA-207ENST00000413642 V9GYV3 84 aa17.18■□□□□ 0.34
VEGFA-207ENST00000413642 IGLV10-54A0A075B6I4 117 aa17.17■□□□□ 0.34
VEGFA-207ENST00000413642 TMEM241Q24JQ0 296 aa17.17■□□□□ 0.34
VEGFA-207ENST00000413642 ISOC2Q96AB3 205 aa17.17■□□□□ 0.34
VEGFA-207ENST00000413642 DNAH8Q96JB1 4490 aa17.17■□□□□ 0.34
VEGFA-207ENST00000413642 A0A1B0GUT8 65 aa17.16■□□□□ 0.34
VEGFA-207ENST00000413642 RPL23P62829 140 aaKnown RBP17.16■□□□□ 0.34
VEGFA-207ENST00000413642 Q6ZSA8 131 aa17.16■□□□□ 0.34
VEGFA-207ENST00000413642 BORCS7Q96B45 105 aa17.16■□□□□ 0.34
VEGFA-207ENST00000413642 A0A1B0GUV1 79 aa17.15■□□□□ 0.34
VEGFA-207ENST00000413642 UBE2L6O14933 153 aa17.14■□□□□ 0.33
VEGFA-207ENST00000413642 SDHAF1A6NFY7 115 aa17.13■□□□□ 0.33
VEGFA-207ENST00000413642 PRSS1P07477 247 aa17.13■□□□□ 0.33
VEGFA-207ENST00000413642 FAM74A3Q4VXF1 159 aa17.13■□□□□ 0.33
VEGFA-207ENST00000413642 RNF185Q96GF1 192 aa17.13■□□□□ 0.33
VEGFA-207ENST00000413642 FAM231BA6NCW3 169 aa17.12■□□□□ 0.33
VEGFA-207ENST00000413642 INAFM2P0DMQ5 153 aa17.12■□□□□ 0.33
VEGFA-207ENST00000413642 ADIRFQ15847 76 aa17.12■□□□□ 0.33
VEGFA-207ENST00000413642 C14orf177Q52M58 125 aa17.12■□□□□ 0.33
VEGFA-207ENST00000413642 NUP35Q8NFH5 326 aa17.12■□□□□ 0.33
VEGFA-207ENST00000413642 TMEM191AQ9H0A3 160 aa17.12■□□□□ 0.33
VEGFA-207ENST00000413642 PEA15Q15121 130 aa17.11■□□□□ 0.33
VEGFA-207ENST00000413642 NAT8Q9UHE5 227 aa17.11■□□□□ 0.33
VEGFA-207ENST00000413642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-207ENST00000413642 IGKV2-29A2NJV5 120 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-207ENST00000413642 RAB4AP20338 218 aa17.1■□□□□ 0.33
VEGFA-207ENST00000413642 AMN1Q8IY45 258 aa17.1■□□□□ 0.33
VEGFA-207ENST00000413642 RPS10P46783 165 aaKnown RBP17.09■□□□□ 0.33
VEGFA-207ENST00000413642 TRBV6-5A0A0K0K1A5 114 aa17.08■□□□□ 0.32
VEGFA-207ENST00000413642 FAM229AH3BQW9 127 aa17.08■□□□□ 0.32
VEGFA-207ENST00000413642 SMKR1H3BMG3 65 aa17.07■□□□□ 0.32
VEGFA-207ENST00000413642 NCR2O95944 276 aa17.07■□□□□ 0.32
VEGFA-207ENST00000413642 APCSP02743 223 aa17.07■□□□□ 0.32
VEGFA-207ENST00000413642 PMCHP20382 165 aa17.07■□□□□ 0.32
VEGFA-207ENST00000413642 RIGQ13278 110 aa17.07■□□□□ 0.32
VEGFA-207ENST00000413642 SCXQ7RTU7 201 aa17.07■□□□□ 0.32
VEGFA-207ENST00000413642 TRAV8-4A0A0B4J246 113 aa17.06■□□□□ 0.32
VEGFA-207ENST00000413642 IGKV3OR2-268A0A0C4DH90 116 aa17.06■□□□□ 0.32
VEGFA-207ENST00000413642 I3L3M4 83 aa17.06■□□□□ 0.32
VEGFA-207ENST00000413642 ST20Q9HBF5 79 aa17.06■□□□□ 0.32
VEGFA-207ENST00000413642 AMMECR1LQ6DCA0 310 aa17.05■□□□□ 0.32
VEGFA-207ENST00000413642 RNASEKQ6P5S7 137 aaKnown RBP17.05■□□□□ 0.32
VEGFA-207ENST00000413642 TMEM242Q9NWH2 141 aa17.05■□□□□ 0.32
VEGFA-207ENST00000413642 NAT8BQ9UHF3 227 aa17.05■□□□□ 0.32
VEGFA-207ENST00000413642 TSHBP01222 138 aa17.04■□□□□ 0.32
VEGFA-207ENST00000413642 FGF6P10767 208 aa17.04■□□□□ 0.32
VEGFA-207ENST00000413642 MRAP2Q96G30 205 aa17.03■□□□□ 0.32
VEGFA-207ENST00000413642 SMIM27A0A1W2PRY6 76 aa17.02■□□□□ 0.32
VEGFA-207ENST00000413642 POLR2KP53803 58 aaKnown RBP17.02■□□□□ 0.32
VEGFA-207ENST00000413642 CHAC1Q9BUX1 264 aa17.02■□□□□ 0.32
VEGFA-207ENST00000413642 SMDT1Q9H4I9 107 aa17.02■□□□□ 0.32
VEGFA-207ENST00000413642 GAGE12HA6NDE8 117 aa17.01■□□□□ 0.31
VEGFA-207ENST00000413642 LINC00528Q8N1L1 170 aa17.01■□□□□ 0.31
VEGFA-207ENST00000413642 ESDP10768 282 aa17■□□□□ 0.31
VEGFA-207ENST00000413642 DGAT2L7PQ6IED9 249 aa17■□□□□ 0.31
VEGFA-207ENST00000413642 CIRBP-AS1Q8TBR5 109 aa17■□□□□ 0.31
VEGFA-207ENST00000413642 H7C423 109 aa16.99■□□□□ 0.31
VEGFA-207ENST00000413642 CAMPP49913 170 aa16.99■□□□□ 0.31
VEGFA-207ENST00000413642 VPS13BQ7Z7G8 4022 aa16.99■□□□□ 0.31
VEGFA-207ENST00000413642 hDV102S1A0JD36 115 aa16.98■□□□□ 0.31
VEGFA-207ENST00000413642 NRACQ8N912 160 aa16.98■□□□□ 0.31
VEGFA-207ENST00000413642 C9orf163Q8N9P6 203 aa16.98■□□□□ 0.31
VEGFA-207ENST00000413642 CLRN3Q8NCR9 226 aa16.98■□□□□ 0.31
VEGFA-207ENST00000413642 TRBV27A0A0K0K1C4 114 aa16.97■□□□□ 0.31
VEGFA-207ENST00000413642 MRPL51Q4U2R6 128 aaKnown RBP16.97■□□□□ 0.31
VEGFA-207ENST00000413642 SLPIP03973 132 aa16.96■□□□□ 0.31
VEGFA-207ENST00000413642 FAM104BQ5XKR9 115 aa16.96■□□□□ 0.31
VEGFA-207ENST00000413642 CHCHD10Q8WYQ3 142 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-207ENST00000413642 MRPL54Q6P161 138 aaKnown RBP16.94■□□□□ 0.3
VEGFA-207ENST00000413642 PANO1I0J062 215 aa16.93■□□□□ 0.3
VEGFA-207ENST00000413642 VCYO14598 125 aa16.93■□□□□ 0.3
VEGFA-207ENST00000413642 ZNF25P17030 456 aaPredicted RBP16.93■□□□□ 0.3
VEGFA-207ENST00000413642 C15orf56Q8N910 161 aa16.93■□□□□ 0.3
VEGFA-207ENST00000413642 BTF3L4Q96K17 158 aa16.93■□□□□ 0.3
VEGFA-207ENST00000413642 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.93■□□□□ 0.3
VEGFA-207ENST00000413642 SUMO2P61956 95 aaKnown RBP16.92■□□□□ 0.3
VEGFA-207ENST00000413642 CNBPP62633 177 aaKnown RBP16.92■□□□□ 0.3
VEGFA-207ENST00000413642 SDIM1Q6ZPB5 146 aa16.92■□□□□ 0.3
VEGFA-207ENST00000413642 OR5A1Q8NGJ0 315 aa16.92■□□□□ 0.3
VEGFA-207ENST00000413642 TMEM101Q96IK0 257 aa16.92■□□□□ 0.3
VEGFA-207ENST00000413642 PLA2G1BP04054 148 aaKnown RBP16.91■□□□□ 0.3
VEGFA-207ENST00000413642 SRRM2Q9UQ35 2752 aaKnown RBP16.9■□□□□ 0.3
VEGFA-207ENST00000413642 C7orf77A4D0Y5 90 aa16.89■□□□□ 0.29
VEGFA-207ENST00000413642 FCER1GP30273 86 aa16.89■□□□□ 0.29
VEGFA-207ENST00000413642 HIGD2BQ4VC39 106 aa16.89■□□□□ 0.29
VEGFA-207ENST00000413642 MRPL52Q86TS9 123 aaKnown RBP16.89■□□□□ 0.29
VEGFA-207ENST00000413642 AP5S1Q9NUS5 200 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms