RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 C20orf203Q8NBC4 194 aa11.56□□□□□ -0.56
LSM5-204ENST00000409909 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
LSM5-204ENST00000409909 IGLV4-60A0A075B6I1 120 aa11.55□□□□□ -0.56
LSM5-204ENST00000409909 GFRA4Q9GZZ7 299 aa11.55□□□□□ -0.56
LSM5-204ENST00000409909 MYCBP2O75592 4640 aa11.54□□□□□ -0.56
LSM5-204ENST00000409909 A0A1B0GUV1 79 aa11.54□□□□□ -0.56
LSM5-204ENST00000409909 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
LSM5-204ENST00000409909 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
LSM5-204ENST00000409909 COTL1Q14019 142 aa11.54□□□□□ -0.56
LSM5-204ENST00000409909 SMIM15Q7Z3B0 74 aa11.54□□□□□ -0.56
LSM5-204ENST00000409909 C9JQL5 133 aa11.53□□□□□ -0.56
LSM5-204ENST00000409909 INAFM2P0DMQ5 153 aa11.53□□□□□ -0.56
LSM5-204ENST00000409909 REG3AQ06141 175 aa11.53□□□□□ -0.56
LSM5-204ENST00000409909 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
LSM5-204ENST00000409909 OSTCQ9NRP0 149 aa11.53□□□□□ -0.56
LSM5-204ENST00000409909 HIGD1CA8MV81 97 aa11.52□□□□□ -0.57
LSM5-204ENST00000409909 FAM229AH3BQW9 127 aa11.52□□□□□ -0.57
LSM5-204ENST00000409909 AMTP48728 403 aa11.52□□□□□ -0.57
LSM5-204ENST00000409909 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
LSM5-204ENST00000409909 HERC1Q15751 4861 aa11.51□□□□□ -0.57
LSM5-204ENST00000409909 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
LSM5-204ENST00000409909 GAS8-AS1O95177 125 aa11.51□□□□□ -0.57
LSM5-204ENST00000409909 PRSS1P07477 247 aa11.51□□□□□ -0.57
LSM5-204ENST00000409909 SRSF3P84103 164 aaKnown RBP11.51□□□□□ -0.57
LSM5-204ENST00000409909 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
LSM5-204ENST00000409909 V9GYV3 84 aa11.51□□□□□ -0.57
LSM5-204ENST00000409909 FLG2Q5D862 2391 aaPredicted RBP11.5□□□□□ -0.57
LSM5-204ENST00000409909 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
LSM5-204ENST00000409909 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
LSM5-204ENST00000409909 TMEM241Q24JQ0 296 aa11.5□□□□□ -0.57
LSM5-204ENST00000409909 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
LSM5-204ENST00000409909 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
LSM5-204ENST00000409909 UBE2L6O14933 153 aa11.49□□□□□ -0.57
LSM5-204ENST00000409909 BORCS7Q96B45 105 aa11.49□□□□□ -0.57
LSM5-204ENST00000409909 TRAV8-4A0A0B4J246 113 aa11.48□□□□□ -0.57
LSM5-204ENST00000409909 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
LSM5-204ENST00000409909 FAM74A3Q4VXF1 159 aa11.48□□□□□ -0.57
LSM5-204ENST00000409909 SCXQ7RTU7 201 aa11.48□□□□□ -0.57
LSM5-204ENST00000409909 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
LSM5-204ENST00000409909 TMEM191AQ9H0A3 160 aa11.48□□□□□ -0.57
LSM5-204ENST00000409909 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
LSM5-204ENST00000409909 NCR2O95944 276 aa11.47□□□□□ -0.57
LSM5-204ENST00000409909 NUP35Q8NFH5 326 aa11.47□□□□□ -0.57
LSM5-204ENST00000409909 CHAC1Q9BUX1 264 aa11.47□□□□□ -0.57
LSM5-204ENST00000409909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
LSM5-204ENST00000409909 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
LSM5-204ENST00000409909 RAB4AP20338 218 aa11.46□□□□□ -0.57
LSM5-204ENST00000409909 DMBT1Q9UGM3 2413 aaPredicted RBP11.45□□□□□ -0.58
LSM5-204ENST00000409909 I3L3M4 83 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 APCSP02743 223 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
LSM5-204ENST00000409909 PEA15Q15121 130 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 ADIRFQ15847 76 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 DGAT2L7PQ6IED9 249 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 LINC00528Q8N1L1 170 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 NAT8Q9UHE5 227 aa11.45□□□□□ -0.58
LSM5-204ENST00000409909 PMCHP20382 165 aa11.44□□□□□ -0.58
LSM5-204ENST00000409909 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
LSM5-204ENST00000409909 H7C423 109 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 TSHBP01222 138 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 FGF6P10767 208 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
LSM5-204ENST00000409909 RIGQ13278 110 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 C9orf163Q8N9P6 203 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 CLRN3Q8NCR9 226 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 NAT8BQ9UHF3 227 aa11.43□□□□□ -0.58
LSM5-204ENST00000409909 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
LSM5-204ENST00000409909 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
LSM5-204ENST00000409909 RNASEKQ6P5S7 137 aaKnown RBP11.42□□□□□ -0.58
LSM5-204ENST00000409909 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
LSM5-204ENST00000409909 SMIM27A0A1W2PRY6 76 aa11.41□□□□□ -0.58
LSM5-204ENST00000409909 ESDP10768 282 aa11.41□□□□□ -0.58
LSM5-204ENST00000409909 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
LSM5-204ENST00000409909 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.58
LSM5-204ENST00000409909 hDV102S1A0JD36 115 aa11.4□□□□□ -0.58
LSM5-204ENST00000409909 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.58
LSM5-204ENST00000409909 SLPIP03973 132 aa11.4□□□□□ -0.58
LSM5-204ENST00000409909 PLA2G1BP04054 148 aaKnown RBP11.4□□□□□ -0.58
LSM5-204ENST00000409909 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
LSM5-204ENST00000409909 SDIM1Q6ZPB5 146 aa11.39□□□□□ -0.59
LSM5-204ENST00000409909 NRACQ8N912 160 aa11.39□□□□□ -0.59
LSM5-204ENST00000409909 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
LSM5-204ENST00000409909 PANO1I0J062 215 aa11.38□□□□□ -0.59
LSM5-204ENST00000409909 ZNF25P17030 456 aaPredicted RBP11.38□□□□□ -0.59
LSM5-204ENST00000409909 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
LSM5-204ENST00000409909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.38□□□□□ -0.59
LSM5-204ENST00000409909 CAMPP49913 170 aa11.37□□□□□ -0.59
LSM5-204ENST00000409909 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
LSM5-204ENST00000409909 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
LSM5-204ENST00000409909 VCYO14598 125 aa11.36□□□□□ -0.59
LSM5-204ENST00000409909 MRPL51Q4U2R6 128 aaKnown RBP11.36□□□□□ -0.59
LSM5-204ENST00000409909 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
LSM5-204ENST00000409909 MRPL52Q86TS9 123 aaKnown RBP11.35□□□□□ -0.59
LSM5-204ENST00000409909 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
LSM5-204ENST00000409909 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
LSM5-204ENST00000409909 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms