RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RPL32P62910 135 aaKnown RBP19.94■□□□□ 0.78
USP42-202ENST00000404008 NIT1Q86X76 327 aa19.94■□□□□ 0.78
USP42-202ENST00000404008 KRTAP1-5Q9BYS1 174 aa19.94■□□□□ 0.78
USP42-202ENST00000404008 MRPL18Q9H0U6 180 aaKnown RBP19.94■□□□□ 0.78
USP42-202ENST00000404008 TSHBP01222 138 aa19.93■□□□□ 0.78
USP42-202ENST00000404008 KIAA1644Q3SXP7 199 aa19.93■□□□□ 0.78
USP42-202ENST00000404008 TTC32Q5I0X7 151 aa19.93■□□□□ 0.78
USP42-202ENST00000404008 CHCHD5Q9BSY4 110 aa19.93■□□□□ 0.78
USP42-202ENST00000404008 AMTP48728 403 aa19.92■□□□□ 0.78
USP42-202ENST00000404008 Q8N3U1 123 aa19.91■□□□□ 0.78
USP42-202ENST00000404008 SMIM2Q9BVW6 85 aa19.91■□□□□ 0.78
USP42-202ENST00000404008 K7EP13 123 aa19.9■□□□□ 0.78
USP42-202ENST00000404008 TMEM243Q9BU79 118 aa19.9■□□□□ 0.78
USP42-202ENST00000404008 TRAV9-2A0A087WT02 112 aa19.89■□□□□ 0.77
USP42-202ENST00000404008 IGHV3-30P01768 117 aa19.89■□□□□ 0.77
USP42-202ENST00000404008 IGHV3-33P01772 117 aa19.89■□□□□ 0.77
USP42-202ENST00000404008 IGHV3-30-3P0DP02 117 aa19.89■□□□□ 0.77
USP42-202ENST00000404008 IGHV3-30-5P0DP03 117 aa19.89■□□□□ 0.77
USP42-202ENST00000404008 TRAPPC1Q9Y5R8 145 aa19.89■□□□□ 0.77
USP42-202ENST00000404008 PRSS47A8MTI9 375 aa19.88■□□□□ 0.77
USP42-202ENST00000404008 ATP6V1G1O75348 118 aa19.88■□□□□ 0.77
USP42-202ENST00000404008 FABP9Q0Z7S8 132 aa19.88■□□□□ 0.77
USP42-202ENST00000404008 KIR2DL4Q99706 377 aa19.88■□□□□ 0.77
USP42-202ENST00000404008 DNAH2Q9P225 4427 aa19.88■□□□□ 0.77
USP42-202ENST00000404008 CHCHD7Q9BUK0 85 aa19.87■□□□□ 0.77
USP42-202ENST00000404008 MAP1LC3AQ9H492 121 aa19.87■□□□□ 0.77
USP42-202ENST00000404008 A0A087WX48 190 aa19.86■□□□□ 0.77
USP42-202ENST00000404008 TMEM262E9PQX1 116 aa19.86■□□□□ 0.77
USP42-202ENST00000404008 SCO1O75880 301 aa19.86■□□□□ 0.77
USP42-202ENST00000404008 PKIAP61925 76 aa19.86■□□□□ 0.77
USP42-202ENST00000404008 GAGE6Q13070 117 aa19.86■□□□□ 0.77
USP42-202ENST00000404008 S100A1P23297 94 aa19.85■□□□□ 0.77
USP42-202ENST00000404008 FCER1GP30273 86 aa19.85■□□□□ 0.77
USP42-202ENST00000404008 C10orf126Q8N4M7 172 aa19.85■□□□□ 0.77
USP42-202ENST00000404008 ALKBH7Q9BT30 221 aaPredicted RBP19.85■□□□□ 0.77
USP42-202ENST00000404008 FRAS1Q86XX4 4008 aa19.85■□□□□ 0.77
USP42-202ENST00000404008 MPV17L2Q567V2 206 aa19.84■□□□□ 0.77
USP42-202ENST00000404008 LOC389332A0A1B0GUA5 103 aa19.83■□□□□ 0.77
USP42-202ENST00000404008 ESDP10768 282 aa19.83■□□□□ 0.77
USP42-202ENST00000404008 UBE2L6O14933 153 aa19.83■□□□□ 0.76
USP42-202ENST00000404008 TCAPO15273 167 aa19.82■□□□□ 0.76
USP42-202ENST00000404008 COLCA2A8K830 154 aa19.81■□□□□ 0.76
USP42-202ENST00000404008 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.8■□□□□ 0.76
USP42-202ENST00000404008 IGKV2-29A2NJV5 120 aaPredicted RBP19.8■□□□□ 0.76
USP42-202ENST00000404008 IBA57-AS1B1ANH7 110 aa19.8■□□□□ 0.76
USP42-202ENST00000404008 H7C423 109 aa19.8■□□□□ 0.76
USP42-202ENST00000404008 RBX1P62877 108 aa19.8■□□□□ 0.76
USP42-202ENST00000404008 Q8N8P6 123 aa19.8■□□□□ 0.76
USP42-202ENST00000404008 Q8N976 141 aa19.8■□□□□ 0.76
USP42-202ENST00000404008 BTF3P20290 206 aaKnown RBP19.78■□□□□ 0.76
USP42-202ENST00000404008 C1orf134Q5TEV5 83 aa19.78■□□□□ 0.76
USP42-202ENST00000404008 C6orf223Q8N319 242 aa19.78■□□□□ 0.76
USP42-202ENST00000404008 A0A1B0GUV1 79 aa19.77■□□□□ 0.76
USP42-202ENST00000404008 LAGE3Q14657 143 aa19.77■□□□□ 0.76
USP42-202ENST00000404008 NXT2Q9NPJ8 142 aaKnown RBP19.76■□□□□ 0.75
USP42-202ENST00000404008 KLK12Q9UKR0 248 aa19.76■□□□□ 0.75
USP42-202ENST00000404008 RAB5AP20339 215 aa19.75■□□□□ 0.75
USP42-202ENST00000404008 IFI27P40305 119 aaPredicted RBP19.75■□□□□ 0.75
USP42-202ENST00000404008 FGF6P10767 208 aa19.74■□□□□ 0.75
USP42-202ENST00000404008 DNAH10Q8IVF4 4471 aa19.74■□□□□ 0.75
USP42-202ENST00000404008 ANGP03950 147 aaKnown RBP19.73■□□□□ 0.75
USP42-202ENST00000404008 C20orf203Q8NBC4 194 aa19.73■□□□□ 0.75
USP42-202ENST00000404008 IGLV4-60A0A075B6I1 120 aa19.72■□□□□ 0.75
USP42-202ENST00000404008 AMMECR1LQ6DCA0 310 aa19.72■□□□□ 0.75
USP42-202ENST00000404008 K7EMI3 77 aa19.71■□□□□ 0.75
USP42-202ENST00000404008 RTL8CO15255 209 aa19.7■□□□□ 0.74
USP42-202ENST00000404008 ZNF25P17030 456 aaPredicted RBP19.7■□□□□ 0.74
USP42-202ENST00000404008 RNASEKQ6P5S7 137 aaKnown RBP19.7■□□□□ 0.74
USP42-202ENST00000404008 MRPL52Q86TS9 123 aaKnown RBP19.7■□□□□ 0.74
USP42-202ENST00000404008 PRSS3P2Q8NHM4 247 aa19.7■□□□□ 0.74
USP42-202ENST00000404008 TRGC2P03986 189 aa19.7■□□□□ 0.74
USP42-202ENST00000404008 NFE4Q86UQ8 179 aa19.7■□□□□ 0.74
USP42-202ENST00000404008 C18orf32Q8TCD1 76 aa19.7■□□□□ 0.74
USP42-202ENST00000404008 Q9HAA7 133 aa19.7■□□□□ 0.74
USP42-202ENST00000404008 TRAV8-3A0A0A6YYJ7 113 aa19.69■□□□□ 0.74
USP42-202ENST00000404008 UBE2WQ96B02 151 aa19.69■□□□□ 0.74
USP42-202ENST00000404008 TMEM18Q96B42 140 aa19.69■□□□□ 0.74
USP42-202ENST00000404008 ORMDL2Q53FV1 153 aa19.68■□□□□ 0.74
USP42-202ENST00000404008 ENHOQ6UWT2 76 aa19.68■□□□□ 0.74
USP42-202ENST00000404008 Q6ZRN7 208 aaPredicted RBP19.68■□□□□ 0.74
USP42-202ENST00000404008 LINC00269Q8N2A0 174 aa19.68■□□□□ 0.74
USP42-202ENST00000404008 PRR34Q9NV39 138 aa19.68■□□□□ 0.74
USP42-202ENST00000404008 UBE2D4Q9Y2X8 147 aa19.68■□□□□ 0.74
USP42-202ENST00000404008 RPL39P62891 51 aaKnown RBP19.67■□□□□ 0.74
USP42-202ENST00000404008 DNAH17Q9UFH2 4485 aa19.66■□□□□ 0.74
USP42-202ENST00000404008 LINC01546A6NGU7 62 aa19.66■□□□□ 0.74
USP42-202ENST00000404008 TMEM101Q96IK0 257 aa19.66■□□□□ 0.74
USP42-202ENST00000404008 CRPP02741 224 aa19.65■□□□□ 0.74
USP42-202ENST00000404008 SMAGPQ0VAQ4 97 aa19.65■□□□□ 0.74
USP42-202ENST00000404008 Q0VG73 95 aa19.65■□□□□ 0.74
USP42-202ENST00000404008 OR5A1Q8NGJ0 315 aa19.65■□□□□ 0.74
USP42-202ENST00000404008 CLPSL2Q6UWE3 100 aa19.64■□□□□ 0.73
USP42-202ENST00000404008 TIMM21Q9BVV7 248 aa19.64■□□□□ 0.73
USP42-202ENST00000404008 CSDC2Q9Y534 153 aaKnown RBP19.64■□□□□ 0.73
USP42-202ENST00000404008 FAT2Q9NYQ8 4349 aa19.64■□□□□ 0.73
USP42-202ENST00000404008 REG3AQ06141 175 aa19.63■□□□□ 0.73
USP42-202ENST00000404008 FA2HQ7L5A8 372 aa19.62■□□□□ 0.73
USP42-202ENST00000404008 MIAQ16674 131 aa19.61■□□□□ 0.73
USP42-202ENST00000404008 DGAT2L7PQ6IED9 249 aa19.61■□□□□ 0.73
USP42-202ENST00000404008 CDC42SE2Q9NRR3 84 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms