RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 AMTP48728 403 aa16.18■□□□□ 0.18
TSPAN4-203ENST00000397397 Q8N8P6 123 aa16.18■□□□□ 0.18
TSPAN4-203ENST00000397397 LINC00476Q8WZB0 136 aa16.18■□□□□ 0.18
TSPAN4-203ENST00000397397 LY6G6CO95867 125 aa16.17■□□□□ 0.18
TSPAN4-203ENST00000397397 IFI27P40305 119 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-203ENST00000397397 IQCJQ1A5X6 159 aa16.17■□□□□ 0.18
TSPAN4-203ENST00000397397 UPK3BQ9BT76 320 aa16.17■□□□□ 0.18
TSPAN4-203ENST00000397397 IGLV2-18A0A075B6J9 118 aa16.16■□□□□ 0.18
TSPAN4-203ENST00000397397 WFDC10BQ8IUB3 73 aa16.16■□□□□ 0.18
TSPAN4-203ENST00000397397 PRSS3P2Q8NHM4 247 aa16.16■□□□□ 0.18
TSPAN4-203ENST00000397397 C18orf32Q8TCD1 76 aa16.16■□□□□ 0.18
TSPAN4-203ENST00000397397 NXT2Q9NPJ8 142 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-203ENST00000397397 TCAPO15273 167 aa16.15■□□□□ 0.18
TSPAN4-203ENST00000397397 CHCHD5Q9BSY4 110 aa16.15■□□□□ 0.18
TSPAN4-203ENST00000397397 TMEM243Q9BU79 118 aa16.15■□□□□ 0.18
TSPAN4-203ENST00000397397 DNAH1Q9P2D7 4330 aa16.14■□□□□ 0.17
TSPAN4-203ENST00000397397 VPS13DQ5THJ4 4388 aa16.14■□□□□ 0.17
TSPAN4-203ENST00000397397 CHCHD7Q9BUK0 85 aa16.12■□□□□ 0.17
TSPAN4-203ENST00000397397 Q9H8V8 135 aa16.12■□□□□ 0.17
TSPAN4-203ENST00000397397 SIVA1O15304 175 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 HYDINQ4G0P3 5121 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 TMEM262E9PQX1 116 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 UBE2L6O14933 153 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 ESDP10768 282 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 GAGE6Q13070 117 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 FA2HQ7L5A8 372 aa16.11■□□□□ 0.17
TSPAN4-203ENST00000397397 NIT1Q86X76 327 aa16.1■□□□□ 0.17
TSPAN4-203ENST00000397397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-203ENST00000397397 IGKV2-29A2NJV5 120 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-203ENST00000397397 K7EMI3 77 aa16.08■□□□□ 0.16
TSPAN4-203ENST00000397397 LAGE3Q14657 143 aa16.08■□□□□ 0.16
TSPAN4-203ENST00000397397 IGHV3-30P01768 117 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 IGHV3-33P01772 117 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 DNAH10OSP0CZ25 163 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 IGHV3-30-3P0DP02 117 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 IGHV3-30-5P0DP03 117 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 PKIAP61925 76 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 ORMDL2Q53FV1 153 aa16.07■□□□□ 0.16
TSPAN4-203ENST00000397397 A0A087WX48 190 aa16.06■□□□□ 0.16
TSPAN4-203ENST00000397397 RAB5BP61020 215 aa16.06■□□□□ 0.16
TSPAN4-203ENST00000397397 Q0VG73 95 aa16.06■□□□□ 0.16
TSPAN4-203ENST00000397397 BAGE3Q86Y29 109 aa16.06■□□□□ 0.16
TSPAN4-203ENST00000397397 Q8N3U1 123 aa16.06■□□□□ 0.16
TSPAN4-203ENST00000397397 LINC01546A6NGU7 62 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 C1orf196B1AJZ1 125 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 H7C423 109 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 LINC00614P0C842 121 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 LINC01556Q5JQF7 62 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 RNASEKQ6P5S7 137 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 C20orf203Q8NBC4 194 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 TMEM18Q96B42 140 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 URB1-AS1Q96HZ7 61 aa16.05■□□□□ 0.16
TSPAN4-203ENST00000397397 MPV17L2Q567V2 206 aa16.04■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BKO60814 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BJP06899 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BOP23527 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BBP33778 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BDP58876 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BCP62807 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST2H2BEQ16778 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 AMMECR1LQ6DCA0 310 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BHQ93079 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BNQ99877 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 HIST1H2BMQ99879 126 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 AP5S1Q9NUS5 200 aa16.03■□□□□ 0.16
TSPAN4-203ENST00000397397 FGF6P10767 208 aa16.02■□□□□ 0.16
TSPAN4-203ENST00000397397 RPL39P62891 51 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-203ENST00000397397 RBX1P62877 108 aa16.02■□□□□ 0.15
TSPAN4-203ENST00000397397 BTF3P20290 206 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-203ENST00000397397 Q8N976 141 aa16.01■□□□□ 0.15
TSPAN4-203ENST00000397397 DNAH6Q9C0G6 4158 aa16.01■□□□□ 0.15
TSPAN4-203ENST00000397397 TRAV9-2A0A087WT02 112 aa16■□□□□ 0.15
TSPAN4-203ENST00000397397 G0S2P27469 103 aa16■□□□□ 0.15
TSPAN4-203ENST00000397397 SMAGPQ0VAQ4 97 aa16■□□□□ 0.15
TSPAN4-203ENST00000397397 CHCHD1Q96BP2 118 aaKnown RBP16■□□□□ 0.15
TSPAN4-203ENST00000397397 CYSLTR1Q9Y271 337 aa16■□□□□ 0.15
TSPAN4-203ENST00000397397 NBDYA0A0U1RRE5 68 aa15.99■□□□□ 0.15
TSPAN4-203ENST00000397397 A0A1B0GUV1 79 aa15.99■□□□□ 0.15
TSPAN4-203ENST00000397397 C2orf66Q6UXQ4 117 aa15.99■□□□□ 0.15
TSPAN4-203ENST00000397397 MRPL52Q86TS9 123 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-203ENST00000397397 TMEM101Q96IK0 257 aa15.99■□□□□ 0.15
TSPAN4-203ENST00000397397 IGLV4-60A0A075B6I1 120 aa15.98■□□□□ 0.15
TSPAN4-203ENST00000397397 M0R2N4 97 aa15.98■□□□□ 0.15
TSPAN4-203ENST00000397397 ZNF25P17030 456 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-203ENST00000397397 TTC32Q5I0X7 151 aa15.98■□□□□ 0.15
TSPAN4-203ENST00000397397 UBE2D4Q9Y2X8 147 aa15.98■□□□□ 0.15
TSPAN4-203ENST00000397397 SERF1AO75920 110 aa15.97■□□□□ 0.15
TSPAN4-203ENST00000397397 ANGP03950 147 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-203ENST00000397397 DGAT2L7PQ6IED9 249 aa15.97■□□□□ 0.15
TSPAN4-203ENST00000397397 C10orf126Q8N4M7 172 aa15.97■□□□□ 0.15
TSPAN4-203ENST00000397397 OR5A1Q8NGJ0 315 aa15.97■□□□□ 0.15
TSPAN4-203ENST00000397397 KLK12Q9UKR0 248 aa15.97■□□□□ 0.15
TSPAN4-203ENST00000397397 K7EP13 123 aa15.96■□□□□ 0.15
TSPAN4-203ENST00000397397 TIMM21Q9BVV7 248 aa15.96■□□□□ 0.15
TSPAN4-203ENST00000397397 KRTAP1-5Q9BYS1 174 aa15.96■□□□□ 0.15
TSPAN4-203ENST00000397397 PMCHL1Q16048 86 aa15.95■□□□□ 0.14
TSPAN4-203ENST00000397397 TOMM6Q96B49 74 aa15.95■□□□□ 0.14
TSPAN4-203ENST00000397397 SPANXA1Q9NS26 97 aa15.95■□□□□ 0.14
TSPAN4-203ENST00000397397 HSBP1O75506 76 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms