RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 TMEM101Q96IK0 257 aa13.88□□□□□ -0.19
SMARCC2-203ENST00000394023 ODF3Q96PU9 254 aa13.88□□□□□ -0.19
SMARCC2-203ENST00000394023 TIMM17AQ99595 171 aa13.88□□□□□ -0.19
SMARCC2-203ENST00000394023 TSSC4Q9Y5U2 329 aaPredicted RBP13.88□□□□□ -0.19
SMARCC2-203ENST00000394023 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
SMARCC2-203ENST00000394023 BSNQ9UPA5 3926 aa13.88□□□□□ -0.19
SMARCC2-203ENST00000394023 TAL2Q16559 108 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 CHCHD5Q9BSY4 110 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 CELSR1Q9NYQ6 3014 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 LRRC75A-AS1Q8N1F1 130 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 TMEM238C9JI98 176 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 C9orf85Q96MD7 179 aa13.87□□□□□ -0.19
SMARCC2-203ENST00000394023 ERG28Q9UKR5 140 aa13.86□□□□□ -0.19
SMARCC2-203ENST00000394023 ZMAT4Q9H898 229 aa13.85□□□□□ -0.19
SMARCC2-203ENST00000394023 MUC4Q99102 2169 aa13.85□□□□□ -0.19
SMARCC2-203ENST00000394023 HELZ2Q9BYK8 2649 aaKnown RBP13.85□□□□□ -0.19
SMARCC2-203ENST00000394023 TRAV8-3A0A0A6YYJ7 113 aa13.84□□□□□ -0.19
SMARCC2-203ENST00000394023 TRBV27A0A0K0K1C4 114 aa13.84□□□□□ -0.19
SMARCC2-203ENST00000394023 HTN3P15516 51 aa13.84□□□□□ -0.19
SMARCC2-203ENST00000394023 NDUFA12Q9UI09 145 aa13.84□□□□□ -0.19
SMARCC2-203ENST00000394023 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
SMARCC2-203ENST00000394023 SH2D6Q7Z4S9 175 aa13.84□□□□□ -0.19
SMARCC2-203ENST00000394023 COX6CP09669 75 aa13.83□□□□□ -0.2
SMARCC2-203ENST00000394023 FLNBO75369 2602 aaKnown RBP13.83□□□□□ -0.2
SMARCC2-203ENST00000394023 WFDC2Q14508 124 aa13.82□□□□□ -0.2
SMARCC2-203ENST00000394023 SMAGPQ0VAQ4 97 aa13.82□□□□□ -0.2
SMARCC2-203ENST00000394023 FAM19A4Q96LR4 140 aa13.82□□□□□ -0.2
SMARCC2-203ENST00000394023 Q6ZTI0 123 aa13.81□□□□□ -0.2
SMARCC2-203ENST00000394023 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
SMARCC2-203ENST00000394023 CHD6Q8TD26 2715 aa13.81□□□□□ -0.2
SMARCC2-203ENST00000394023 TM2D2Q9BX73 214 aa13.81□□□□□ -0.2
SMARCC2-203ENST00000394023 TEX48A0A1B0GUV7 120 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 TSHBP01222 138 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 PRSS47A8MTI9 375 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 ZNF580Q9UK33 172 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 IGIPA6NJ69 53 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 CIDEAO60543 219 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 LINC00315P59091 139 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 C1QTNF4Q9BXJ3 329 aa13.8□□□□□ -0.2
SMARCC2-203ENST00000394023 IGLV4-3A0A075B6K6 122 aa13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 A4D1N5 150 aa13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 RBMY1A1P0DJD3 496 aaKnown RBP13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 RBMY1CP0DJD4 496 aa13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 RBMY1FQ15415 496 aaKnown RBP13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 SMR3AQ99954 134 aa13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 C11orf68Q9H3H3 251 aaKnown RBP13.79□□□□□ -0.2
SMARCC2-203ENST00000394023 A0A096LPF7 62 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 GAGE6Q13070 117 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 CFAP126Q5VTH2 177 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 PRO1854Q9UHT4 67 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 TRBV6-5A0A0K0K1A5 114 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 Q6ZUT4 128 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 DAND5Q8N907 189 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 LINC01006Q8NI28 216 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 LEPROTO15243 131 aa13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 CMC4P56277 68 aaPredicted RBP13.78□□□□□ -0.2
SMARCC2-203ENST00000394023 PRIMA1Q86XR5 153 aa13.77□□□□□ -0.2
SMARCC2-203ENST00000394023 MUSTN1Q8IVN3 82 aa13.77□□□□□ -0.21
SMARCC2-203ENST00000394023 RBMY1BA6NDE4 496 aaKnown RBP13.77□□□□□ -0.21
SMARCC2-203ENST00000394023 RBMY1EA6NEQ0 496 aaKnown RBP13.77□□□□□ -0.21
SMARCC2-203ENST00000394023 RBMY1DP0C7P1 496 aaKnown RBP13.77□□□□□ -0.21
SMARCC2-203ENST00000394023 TMEM86BQ8N661 226 aa13.77□□□□□ -0.21
SMARCC2-203ENST00000394023 LINC00467Q9BRT7 94 aa13.77□□□□□ -0.21
SMARCC2-203ENST00000394023 A8MZ25 164 aa13.76□□□□□ -0.21
SMARCC2-203ENST00000394023 ODF3L2Q3SX64 289 aa13.76□□□□□ -0.21
SMARCC2-203ENST00000394023 CELSR2Q9HCU4 2923 aa13.76□□□□□ -0.21
SMARCC2-203ENST00000394023 NXPH4O95158 308 aa13.76□□□□□ -0.21
SMARCC2-203ENST00000394023 ZNF22P17026 224 aaPredicted RBP13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 Q9UF83 564 aa13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 A0A0J9YY99 117 aa13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 LINC01546A6NGU7 62 aa13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 C9JAW5 83 aa13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 IGHV3-30-3P0DP02 117 aa13.75□□□□□ -0.21
SMARCC2-203ENST00000394023 TRBV7-3A0A075B6L6 115 aa13.74□□□□□ -0.21
SMARCC2-203ENST00000394023 RNF152Q8N8N0 203 aa13.74□□□□□ -0.21
SMARCC2-203ENST00000394023 A0A096LNT2 108 aa13.74□□□□□ -0.21
SMARCC2-203ENST00000394023 SPANXA1Q9NS26 97 aa13.74□□□□□ -0.21
SMARCC2-203ENST00000394023 F8W1H4 67 aa13.73□□□□□ -0.21
SMARCC2-203ENST00000394023 IGLV4-69A0A075B6H9 119 aa13.73□□□□□ -0.21
SMARCC2-203ENST00000394023 Q6ZSN1 163 aa13.73□□□□□ -0.21
SMARCC2-203ENST00000394023 ESM1Q9NQ30 184 aa13.73□□□□□ -0.21
SMARCC2-203ENST00000394023 TMEM243Q9BU79 118 aa13.73□□□□□ -0.21
SMARCC2-203ENST00000394023 TRAV25A0A0B4J276 109 aa13.73□□□□□ -0.21
SMARCC2-203ENST00000394023 RPL32P62910 135 aaKnown RBP13.72□□□□□ -0.21
SMARCC2-203ENST00000394023 K7EQD1 137 aa13.72□□□□□ -0.21
SMARCC2-203ENST00000394023 RBX1P62877 108 aa13.71□□□□□ -0.21
SMARCC2-203ENST00000394023 TSPEAR-AS2P59090 65 aa13.71□□□□□ -0.21
SMARCC2-203ENST00000394023 OR13C6PQ8NH95 151 aa13.71□□□□□ -0.22
SMARCC2-203ENST00000394023 MORN3Q6PF18 240 aaPredicted RBP13.7□□□□□ -0.22
SMARCC2-203ENST00000394023 Q9H8V8 135 aa13.7□□□□□ -0.22
SMARCC2-203ENST00000394023 DEFB4AO15263 64 aa13.7□□□□□ -0.22
SMARCC2-203ENST00000394023 LINC00158P58513 81 aa13.7□□□□□ -0.22
SMARCC2-203ENST00000394023 CLPSL2Q6UWE3 100 aa13.69□□□□□ -0.22
SMARCC2-203ENST00000394023 DNAJC30Q96LL9 226 aa13.69□□□□□ -0.22
SMARCC2-203ENST00000394023 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
SMARCC2-203ENST00000394023 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
SMARCC2-203ENST00000394023 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms