RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 GAS8-AS1O95177 125 aa12.27□□□□□ -0.45
SNX9-201ENST00000392185 HERVK_113P63121 156 aa12.27□□□□□ -0.45
SNX9-201ENST00000392185 AMTNQ6UX39 209 aa12.27□□□□□ -0.45
SNX9-201ENST00000392185 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
SNX9-201ENST00000392185 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
SNX9-201ENST00000392185 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
SNX9-201ENST00000392185 LEPROTO15243 131 aa12.26□□□□□ -0.45
SNX9-201ENST00000392185 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
SNX9-201ENST00000392185 BAALCQ8WXS3 180 aa12.26□□□□□ -0.45
SNX9-201ENST00000392185 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
SNX9-201ENST00000392185 CST9LQ9H4G1 147 aa12.26□□□□□ -0.45
SNX9-201ENST00000392185 ODF1Q14990 250 aa12.25□□□□□ -0.45
SNX9-201ENST00000392185 C20orf203Q8NBC4 194 aa12.25□□□□□ -0.45
SNX9-201ENST00000392185 C11orf86A6NJI1 115 aa12.25□□□□□ -0.45
SNX9-201ENST00000392185 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
SNX9-201ENST00000392185 Q9H8V8 135 aa12.25□□□□□ -0.45
SNX9-201ENST00000392185 FAM222AQ5U5X8 452 aa12.24□□□□□ -0.45
SNX9-201ENST00000392185 CRIP2P52943 208 aaPredicted RBP12.24□□□□□ -0.45
SNX9-201ENST00000392185 DAZ2Q13117 558 aaKnown RBP12.24□□□□□ -0.45
SNX9-201ENST00000392185 DAZ4Q86SG3 579 aaKnown RBP12.24□□□□□ -0.45
SNX9-201ENST00000392185 DAZ3Q9NR90 486 aaKnown RBP12.24□□□□□ -0.45
SNX9-201ENST00000392185 IGHV3-30P01768 117 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 IGHV3-33P01772 117 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 IGHV3-30-3P0DP02 117 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 IGHV3-30-5P0DP03 117 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 RNF185Q96GF1 192 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 UBE2V1Q13404 147 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
SNX9-201ENST00000392185 KLLNB2CW77 178 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 TP73-AS1Q9UF72 201 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 SLC25A20O43772 301 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 FAM110AQ9BQ89 295 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 IGSF10Q6WRI0 2623 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 IGKV2D-24A0A075B6R9 120 aa12.22□□□□□ -0.45
SNX9-201ENST00000392185 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.45
SNX9-201ENST00000392185 ODF3L2Q3SX64 289 aa12.21□□□□□ -0.45
SNX9-201ENST00000392185 PRO0255Q9UI72 69 aa12.21□□□□□ -0.46
SNX9-201ENST00000392185 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.46
SNX9-201ENST00000392185 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
SNX9-201ENST00000392185 OXLD1Q5BKU9 147 aa12.2□□□□□ -0.46
SNX9-201ENST00000392185 MRPL52Q86TS9 123 aaKnown RBP12.2□□□□□ -0.46
SNX9-201ENST00000392185 CEND1Q8N111 149 aa12.2□□□□□ -0.46
SNX9-201ENST00000392185 TIMM17AQ99595 171 aa12.2□□□□□ -0.46
SNX9-201ENST00000392185 C9JAW5 83 aa12.19□□□□□ -0.46
SNX9-201ENST00000392185 Q6ZUT4 128 aa12.19□□□□□ -0.46
SNX9-201ENST00000392185 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
SNX9-201ENST00000392185 DAND5Q8N907 189 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 ATXN8Q156A1 80 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 MUC4Q99102 2169 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 TRAV26-1A0A087WT03 109 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 M0QY20 66 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 CHD6Q8TD26 2715 aa12.18□□□□□ -0.46
SNX9-201ENST00000392185 PRB2P02812 416 aaPredicted RBP12.17□□□□□ -0.46
SNX9-201ENST00000392185 KLK12Q9UKR0 248 aa12.17□□□□□ -0.46
SNX9-201ENST00000392185 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
SNX9-201ENST00000392185 NPSP0C0P6 89 aa12.17□□□□□ -0.46
SNX9-201ENST00000392185 FLNCQ14315 2725 aa12.17□□□□□ -0.46
SNX9-201ENST00000392185 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
SNX9-201ENST00000392185 C9orf118A6NHY6 69 aa12.16□□□□□ -0.46
SNX9-201ENST00000392185 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
SNX9-201ENST00000392185 PRO1854Q9UHT4 67 aa12.16□□□□□ -0.46
SNX9-201ENST00000392185 C12orf74Q32Q52 190 aa12.16□□□□□ -0.46
SNX9-201ENST00000392185 C2orf82Q6UX34 121 aa12.16□□□□□ -0.46
SNX9-201ENST00000392185 SLC25A29Q8N8R3 303 aa12.15□□□□□ -0.46
SNX9-201ENST00000392185 TRAV12-1A0A0B4J245 112 aa12.15□□□□□ -0.46
SNX9-201ENST00000392185 SPTBN5Q9NRC6 3674 aaKnown RBP12.15□□□□□ -0.46
SNX9-201ENST00000392185 ATMQ13315 3056 aa12.15□□□□□ -0.46
SNX9-201ENST00000392185 SIVA1O15304 175 aa12.15□□□□□ -0.47
SNX9-201ENST00000392185 FXYD2P54710 66 aa12.15□□□□□ -0.47
SNX9-201ENST00000392185 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.47
SNX9-201ENST00000392185 LINC00467Q9BRT7 94 aa12.14□□□□□ -0.47
SNX9-201ENST00000392185 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
SNX9-201ENST00000392185 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
SNX9-201ENST00000392185 ETDBQ3ZM63 59 aa12.14□□□□□ -0.47
SNX9-201ENST00000392185 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
SNX9-201ENST00000392185 H3BMG7 143 aa12.13□□□□□ -0.47
SNX9-201ENST00000392185 CRYGDP07320 174 aa12.13□□□□□ -0.47
SNX9-201ENST00000392185 SHISA2Q6UWI4 295 aa12.13□□□□□ -0.47
SNX9-201ENST00000392185 LINC00310P59036 64 aa12.13□□□□□ -0.47
SNX9-201ENST00000392185 NRACQ8N912 160 aa12.13□□□□□ -0.47
SNX9-201ENST00000392185 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
SNX9-201ENST00000392185 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
SNX9-201ENST00000392185 BOD1L2Q8IYS8 172 aa12.12□□□□□ -0.47
SNX9-201ENST00000392185 E9PLD3 99 aa12.12□□□□□ -0.47
SNX9-201ENST00000392185 Q8N976 141 aa12.12□□□□□ -0.47
SNX9-201ENST00000392185 A4D1N5 150 aa12.11□□□□□ -0.47
SNX9-201ENST00000392185 TAL2Q16559 108 aa12.11□□□□□ -0.47
SNX9-201ENST00000392185 CCL25O15444 150 aa12.11□□□□□ -0.47
SNX9-201ENST00000392185 CCL18P55774 89 aa12.11□□□□□ -0.47
SNX9-201ENST00000392185 COX7A2LO14548 114 aa12.1□□□□□ -0.47
SNX9-201ENST00000392185 MUSTN1Q8IVN3 82 aa12.1□□□□□ -0.47
SNX9-201ENST00000392185 U3KQK5 164 aa12.1□□□□□ -0.47
SNX9-201ENST00000392185 ADGRG4Q8IZF6 3080 aa12.1□□□□□ -0.47
SNX9-201ENST00000392185 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
SNX9-201ENST00000392185 TEX48A0A1B0GUV7 120 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 A0A1W2PPM0 123 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 IGLL5B9A064 214 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 SOCS3O14543 225 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms