RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 C20orf197Q8N268 126 aa14.9□□□□□ -0.02
SHANK1-203ENST00000391813 CCL24O00175 119 aa14.89□□□□□ -0.03
SHANK1-203ENST00000391813 A0A0J9YX75 114 aa14.89□□□□□ -0.03
SHANK1-203ENST00000391813 FAM236DA0A1B0GTK5 79 aa14.89□□□□□ -0.03
SHANK1-203ENST00000391813 FAM236CP0DP71 79 aa14.89□□□□□ -0.03
SHANK1-203ENST00000391813 INSL3P51460 131 aa14.89□□□□□ -0.03
SHANK1-203ENST00000391813 MP68P56378 58 aa14.88□□□□□ -0.03
SHANK1-203ENST00000391813 C16orf74Q96GX8 76 aa14.88□□□□□ -0.03
SHANK1-203ENST00000391813 URB1-AS1Q96HZ7 61 aa14.88□□□□□ -0.03
SHANK1-203ENST00000391813 ODF3Q96PU9 254 aa14.88□□□□□ -0.03
SHANK1-203ENST00000391813 MYO18BQ8IUG5 2567 aa14.88□□□□□ -0.03
SHANK1-203ENST00000391813 C9orf66Q5T8R8 295 aa14.87□□□□□ -0.03
SHANK1-203ENST00000391813 TMEM89A2RUT3 159 aa14.87□□□□□ -0.03
SHANK1-203ENST00000391813 BRK1Q8WUW1 75 aa14.87□□□□□ -0.03
SHANK1-203ENST00000391813 TRAV23DV6A0A075B6W5 121 aa14.87□□□□□ -0.03
SHANK1-203ENST00000391813 SDIM1Q6ZPB5 146 aa14.86□□□□□ -0.03
SHANK1-203ENST00000391813 ZFP36P26651 326 aaKnown RBP14.86□□□□□ -0.03
SHANK1-203ENST00000391813 SIRPDQ9H106 197 aa14.86□□□□□ -0.03
SHANK1-203ENST00000391813 CCDC179H3BU77 68 aa14.86□□□□□ -0.03
SHANK1-203ENST00000391813 IGLV4-3A0A075B6K6 122 aa14.86□□□□□ -0.03
SHANK1-203ENST00000391813 LMO4P61968 165 aa14.86□□□□□ -0.03
SHANK1-203ENST00000391813 SERP2Q8N6R1 65 aa14.86□□□□□ -0.03
SHANK1-203ENST00000391813 DEFB1P60022 68 aa14.85□□□□□ -0.03
SHANK1-203ENST00000391813 BLCAPP62952 87 aa14.85□□□□□ -0.03
SHANK1-203ENST00000391813 UPK3BQ9BT76 320 aa14.85□□□□□ -0.03
SHANK1-203ENST00000391813 NRACQ8N912 160 aa14.85□□□□□ -0.03
SHANK1-203ENST00000391813 TIMM17BO60830 172 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 LINC00308Q8TCZ7 52 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 NAV3Q8IVL0 2385 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 FAM240AA0A1B0GVK7 77 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 CLPSL1A2RUU4 121 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 COX7CP15954 63 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 ZMAT4Q9H898 229 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 TRBV27A0A0K0K1C4 114 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 LST1O00453 97 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 TNFRSF13BO14836 293 aaPredicted RBP14.84□□□□□ -0.03
SHANK1-203ENST00000391813 UNQ9165/PRO28630Q6UXU0 137 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 CCDC140Q96MF4 163 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 CNFNQ9BYD5 112 aa14.84□□□□□ -0.03
SHANK1-203ENST00000391813 HHLA3Q9XRX5 114 aa14.83□□□□□ -0.03
SHANK1-203ENST00000391813 TNRC6BQ9UPQ9 1833 aaKnown RBP14.83□□□□□ -0.04
SHANK1-203ENST00000391813 TRBV6-5A0A0K0K1A5 114 aa14.83□□□□□ -0.04
SHANK1-203ENST00000391813 A0A096LPF7 62 aa14.82□□□□□ -0.04
SHANK1-203ENST00000391813 PSCAO43653 123 aa14.82□□□□□ -0.04
SHANK1-203ENST00000391813 CEMP1Q6PRD7 247 aaPredicted RBP14.82□□□□□ -0.04
SHANK1-203ENST00000391813 CDKN2A-AS1Q9UH64 79 aa14.82□□□□□ -0.04
SHANK1-203ENST00000391813 APRG1Q8IVJ8 170 aa14.82□□□□□ -0.04
SHANK1-203ENST00000391813 TRBV12-3P01733 135 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 HIGD2BQ4VC39 106 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 WFDC9Q8NEX5 89 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 PIEZO2Q9H5I5 2752 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 NDUFA1O15239 70 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 RPL18AQ02543 176 aaKnown RBP14.81□□□□□ -0.04
SHANK1-203ENST00000391813 PYGO1Q9Y3Y4 419 aa14.81□□□□□ -0.04
SHANK1-203ENST00000391813 DIRC1Q969H9 104 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 IGHV4OR15-8A0A075B7B6 117 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 A0A087WW49 117 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 GYPEP15421 78 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 RMI2Q96E14 147 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 IGHV4-4A0A075B6R2 117 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 TIRAPP58753 221 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 Q6ZQT7 251 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 ZFAND2AQ8N6M9 145 aa14.8□□□□□ -0.04
SHANK1-203ENST00000391813 HCFC1P51610 2035 aa14.79□□□□□ -0.04
SHANK1-203ENST00000391813 PRR14LQ5THK1 2151 aa14.79□□□□□ -0.04
SHANK1-203ENST00000391813 PLA2G2AP14555 144 aa14.79□□□□□ -0.04
SHANK1-203ENST00000391813 ODF3BA8MYP8 253 aa14.78□□□□□ -0.04
SHANK1-203ENST00000391813 DEFB105AQ8NG35 78 aa14.78□□□□□ -0.04
SHANK1-203ENST00000391813 ETDCA0A1B0GVM5 59 aa14.78□□□□□ -0.04
SHANK1-203ENST00000391813 CAMK2N2Q96S95 79 aa14.78□□□□□ -0.04
SHANK1-203ENST00000391813 CEP295Q9C0D2 2601 aa14.77□□□□□ -0.04
SHANK1-203ENST00000391813 M0QY20 66 aa14.77□□□□□ -0.04
SHANK1-203ENST00000391813 FAM222AQ5U5X8 452 aa14.77□□□□□ -0.04
SHANK1-203ENST00000391813 SLURP1P55000 103 aa14.77□□□□□ -0.04
SHANK1-203ENST00000391813 USP17L23D6RBM5 183 aa14.77□□□□□ -0.05
SHANK1-203ENST00000391813 UBE2D1P51668 147 aa14.77□□□□□ -0.05
SHANK1-203ENST00000391813 ZFAND3Q9H8U3 227 aa14.77□□□□□ -0.05
SHANK1-203ENST00000391813 NDUFC2-KCTD14E9PQ53 114 aa14.76□□□□□ -0.05
SHANK1-203ENST00000391813 NDUFC1O43677 76 aa14.76□□□□□ -0.05
SHANK1-203ENST00000391813 ATP5EP56381 51 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-203ENST00000391813 IGHV4-31P0DP07 118 aa14.76□□□□□ -0.05
SHANK1-203ENST00000391813 WFDC11Q8NEX6 87 aa14.76□□□□□ -0.05
SHANK1-203ENST00000391813 SMAD5-AS1Q9Y6J3 95 aa14.76□□□□□ -0.05
SHANK1-203ENST00000391813 DSCAMO60469 2012 aa14.75□□□□□ -0.05
SHANK1-203ENST00000391813 DEFB136Q30KP8 78 aa14.75□□□□□ -0.05
SHANK1-203ENST00000391813 CHD8Q9HCK8 2581 aa14.75□□□□□ -0.05
SHANK1-203ENST00000391813 TMEM263Q8WUH6 116 aaKnown RBP14.75□□□□□ -0.05
SHANK1-203ENST00000391813 COL5A1P20908 1838 aaPredicted RBP14.75□□□□□ -0.05
SHANK1-203ENST00000391813 A6NDX4 124 aa14.74□□□□□ -0.05
SHANK1-203ENST00000391813 HIVEP3Q5T1R4 2406 aa14.74□□□□□ -0.05
SHANK1-203ENST00000391813 IBA57-AS1B1ANH7 110 aa14.74□□□□□ -0.05
SHANK1-203ENST00000391813 C11orf71Q6IPW1 123 aa14.74□□□□□ -0.05
SHANK1-203ENST00000391813 IGLV10-54A0A075B6I4 117 aa14.73□□□□□ -0.05
SHANK1-203ENST00000391813 POLR2KP53803 58 aaKnown RBP14.73□□□□□ -0.05
SHANK1-203ENST00000391813 NCR3O14931 201 aa14.73□□□□□ -0.05
SHANK1-203ENST00000391813 EBI3Q14213 229 aa14.73□□□□□ -0.05
SHANK1-203ENST00000391813 KIAA1549Q9HCM3 1950 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 UBE2D3P61077 147 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 UBE2D2P62837 147 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms