RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 COLCA2A8K830 154 aa10.91□□□□□ -0.66
SNRPB-201ENST00000381342 TNP2Q05952 138 aa10.91□□□□□ -0.66
SNRPB-201ENST00000381342 IQCJQ1A5X6 159 aa10.91□□□□□ -0.66
SNRPB-201ENST00000381342 NRACQ8N912 160 aa10.91□□□□□ -0.66
SNRPB-201ENST00000381342 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
SNRPB-201ENST00000381342 D6R8Y8 96 aa10.9□□□□□ -0.66
SNRPB-201ENST00000381342 K7EP13 123 aa10.9□□□□□ -0.66
SNRPB-201ENST00000381342 CKS2P33552 79 aa10.9□□□□□ -0.66
SNRPB-201ENST00000381342 AMTP48728 403 aa10.9□□□□□ -0.66
SNRPB-201ENST00000381342 TMEM70Q9BUB7 260 aa10.9□□□□□ -0.66
SNRPB-201ENST00000381342 A0A087WX48 190 aa10.89□□□□□ -0.67
SNRPB-201ENST00000381342 GAGE6Q13070 117 aa10.89□□□□□ -0.67
SNRPB-201ENST00000381342 MPV17L2Q567V2 206 aa10.89□□□□□ -0.67
SNRPB-201ENST00000381342 TMEM243Q9BU79 118 aa10.89□□□□□ -0.67
SNRPB-201ENST00000381342 IBA57-AS1B1ANH7 110 aa10.88□□□□□ -0.67
SNRPB-201ENST00000381342 TMEM262E9PQX1 116 aa10.88□□□□□ -0.67
SNRPB-201ENST00000381342 PMCHP20382 165 aa10.88□□□□□ -0.67
SNRPB-201ENST00000381342 CHCHD7Q9BUK0 85 aa10.88□□□□□ -0.67
SNRPB-201ENST00000381342 Q9HAA7 133 aa10.88□□□□□ -0.67
SNRPB-201ENST00000381342 I3L3M4 83 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 PPP1R17O96001 155 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 TSHBP01222 138 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 APCSP02743 223 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
SNRPB-201ENST00000381342 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
SNRPB-201ENST00000381342 COX19Q49B96 90 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 Q6ZRN7 208 aaPredicted RBP10.87□□□□□ -0.67
SNRPB-201ENST00000381342 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 NFE4Q86UQ8 179 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 HECTD4Q9Y4D8 3996 aa10.87□□□□□ -0.67
SNRPB-201ENST00000381342 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 C16orf90A8MZG2 172 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 EREGO14944 169 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 TNFRSF6BO95407 300 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 NPYP01303 97 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 RAB5AP20339 215 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 LAGE3Q14657 143 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 ORMDL3Q8N138 153 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 Q8N976 141 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 KLK12Q9UKR0 248 aa10.86□□□□□ -0.67
SNRPB-201ENST00000381342 PPBPP02775 128 aa10.85□□□□□ -0.67
SNRPB-201ENST00000381342 PKIAP61925 76 aa10.85□□□□□ -0.67
SNRPB-201ENST00000381342 PRELID3AQ96N28 172 aa10.85□□□□□ -0.67
SNRPB-201ENST00000381342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.84□□□□□ -0.67
SNRPB-201ENST00000381342 IGKV2-29A2NJV5 120 aaPredicted RBP10.84□□□□□ -0.67
SNRPB-201ENST00000381342 UBE2L6O14933 153 aa10.84□□□□□ -0.67
SNRPB-201ENST00000381342 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
SNRPB-201ENST00000381342 RBX1P62877 108 aa10.84□□□□□ -0.67
SNRPB-201ENST00000381342 GNB1LQ9BYB4 327 aa10.84□□□□□ -0.67
SNRPB-201ENST00000381342 VCYO14598 125 aa10.83□□□□□ -0.68
SNRPB-201ENST00000381342 MT-ND6P03923 174 aa10.83□□□□□ -0.68
SNRPB-201ENST00000381342 C20orf78Q9BR46 151 aa10.83□□□□□ -0.68
SNRPB-201ENST00000381342 SMIM2Q9BVW6 85 aa10.83□□□□□ -0.68
SNRPB-201ENST00000381342 PKD1P98161 4303 aa10.83□□□□□ -0.68
SNRPB-201ENST00000381342 PHOX2AO14813 284 aa10.82□□□□□ -0.68
SNRPB-201ENST00000381342 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
SNRPB-201ENST00000381342 FCER1GP30273 86 aa10.82□□□□□ -0.68
SNRPB-201ENST00000381342 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
SNRPB-201ENST00000381342 SPATA12Q7Z6I5 190 aa10.82□□□□□ -0.68
SNRPB-201ENST00000381342 UBE2WQ96B02 151 aa10.82□□□□□ -0.68
SNRPB-201ENST00000381342 IGLV4-60A0A075B6I1 120 aa10.81□□□□□ -0.68
SNRPB-201ENST00000381342 RPL32P62910 135 aaKnown RBP10.81□□□□□ -0.68
SNRPB-201ENST00000381342 KIAA1644Q3SXP7 199 aa10.81□□□□□ -0.68
SNRPB-201ENST00000381342 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
SNRPB-201ENST00000381342 DNAH11Q96DT5 4516 aa10.81□□□□□ -0.68
SNRPB-201ENST00000381342 TRAV8-3A0A0A6YYJ7 113 aa10.8□□□□□ -0.68
SNRPB-201ENST00000381342 CRPP02741 224 aa10.8□□□□□ -0.68
SNRPB-201ENST00000381342 ESDP10768 282 aa10.8□□□□□ -0.68
SNRPB-201ENST00000381342 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
SNRPB-201ENST00000381342 PSCAO43653 123 aa10.79□□□□□ -0.68
SNRPB-201ENST00000381342 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
SNRPB-201ENST00000381342 ENHOQ6UWT2 76 aa10.79□□□□□ -0.68
SNRPB-201ENST00000381342 LINC00269Q8N2A0 174 aa10.79□□□□□ -0.68
SNRPB-201ENST00000381342 LAMTOR2Q9Y2Q5 125 aa10.79□□□□□ -0.68
SNRPB-201ENST00000381342 LOC389332A0A1B0GUA5 103 aa10.78□□□□□ -0.68
SNRPB-201ENST00000381342 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
SNRPB-201ENST00000381342 FGF6P10767 208 aa10.78□□□□□ -0.68
SNRPB-201ENST00000381342 RNASEKQ6P5S7 137 aaKnown RBP10.78□□□□□ -0.68
SNRPB-201ENST00000381342 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
SNRPB-201ENST00000381342 MAP1LC3AQ9H492 121 aa10.78□□□□□ -0.68
SNRPB-201ENST00000381342 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
SNRPB-201ENST00000381342 IGKV2D-24A0A075B6R9 120 aa10.77□□□□□ -0.69
SNRPB-201ENST00000381342 H7C423 109 aa10.77□□□□□ -0.69
SNRPB-201ENST00000381342 TCAPO15273 167 aa10.77□□□□□ -0.69
SNRPB-201ENST00000381342 PRR34Q9NV39 138 aa10.77□□□□□ -0.69
SNRPB-201ENST00000381342 Q0VG73 95 aa10.76□□□□□ -0.69
SNRPB-201ENST00000381342 RMI2Q96E14 147 aa10.76□□□□□ -0.69
SNRPB-201ENST00000381342 PKHD1P08F94 4074 aa10.75□□□□□ -0.69
SNRPB-201ENST00000381342 TRGC2P03986 189 aa10.75□□□□□ -0.69
SNRPB-201ENST00000381342 REG3AQ06141 175 aa10.75□□□□□ -0.69
SNRPB-201ENST00000381342 FABP9Q0Z7S8 132 aa10.75□□□□□ -0.69
SNRPB-201ENST00000381342 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
SNRPB-201ENST00000381342 PGPEP1Q9NXJ5 209 aa10.75□□□□□ -0.69
SNRPB-201ENST00000381342 PRSS47A8MTI9 375 aa10.74□□□□□ -0.69
SNRPB-201ENST00000381342 ZNF25P17030 456 aaPredicted RBP10.74□□□□□ -0.69
SNRPB-201ENST00000381342 MIAQ16674 131 aa10.74□□□□□ -0.69
SNRPB-201ENST00000381342 MRPL52Q86TS9 123 aaKnown RBP10.74□□□□□ -0.69
SNRPB-201ENST00000381342 C1orf43Q9BWL3 253 aa10.74□□□□□ -0.69
SNRPB-201ENST00000381342 A0A087WTM6 91 aa10.73□□□□□ -0.69
SNRPB-201ENST00000381342 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms