RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PF4P02776 101 aa6.89□□□□□ -1.31
TOP1-201ENST00000361337 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
TOP1-201ENST00000361337 CRIP2P52943 208 aaPredicted RBP6.89□□□□□ -1.31
TOP1-201ENST00000361337 NOTCH1P46531 2555 aa6.89□□□□□ -1.31
TOP1-201ENST00000361337 TRBV7-3A0A075B6L6 115 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 INAFM1C9JVW0 142 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 TRACP01848 142 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 PRR9Q5T870 116 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 CFAP126Q5VTH2 177 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
TOP1-201ENST00000361337 LY6G5BQ8NDX9 201 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 HERVK_113P63121 156 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 LINC01620Q4KN68 170 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 HRCT1Q6UXD1 115 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 CLPSL1A2RUU4 121 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 BUB3O43684 328 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 IGHV4-31P0DP07 118 aa6.88□□□□□ -1.31
TOP1-201ENST00000361337 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 J3KT08 172 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 DUSP14O95147 198 aaKnown RBP6.87□□□□□ -1.31
TOP1-201ENST00000361337 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
TOP1-201ENST00000361337 FHL3Q13643 280 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 VPREB3Q9UKI3 123 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 J3QQQ9 107 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
TOP1-201ENST00000361337 TAL2Q16559 108 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
TOP1-201ENST00000361337 CSMD2Q7Z408 3487 aa6.86□□□□□ -1.31
TOP1-201ENST00000361337 PRB2P02812 416 aaPredicted RBP6.86□□□□□ -1.31
TOP1-201ENST00000361337 A0A1B0GX51 115 aa6.86□□□□□ -1.31
TOP1-201ENST00000361337 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
TOP1-201ENST00000361337 FAM110AQ9BQ89 295 aa6.86□□□□□ -1.31
TOP1-201ENST00000361337 FBN2P35556 2912 aa6.86□□□□□ -1.31
TOP1-201ENST00000361337 ODF3BA8MYP8 253 aa6.86□□□□□ -1.31
TOP1-201ENST00000361337 NDUFA11Q86Y39 141 aa6.86□□□□□ -1.31
TOP1-201ENST00000361337 CD28P10747 220 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 CCDC140Q96MF4 163 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 F6UB75 175 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 RNF152Q8N8N0 203 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 TMEM190Q8WZ59 177 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 RHODO00212 210 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 C5orf56Q8N8D9 126 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 DSCR8Q96T75 97 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 RHPN1-AS1Q9BWJ2 59 aa6.85□□□□□ -1.31
TOP1-201ENST00000361337 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
TOP1-201ENST00000361337 F5H768 121 aa6.84□□□□□ -1.31
TOP1-201ENST00000361337 ZNF876PQ49A33 203 aa6.84□□□□□ -1.31
TOP1-201ENST00000361337 Q8N6K4 173 aa6.84□□□□□ -1.31
TOP1-201ENST00000361337 RASL10AQ92737 203 aa6.84□□□□□ -1.31
TOP1-201ENST00000361337 C11orf86A6NJI1 115 aa6.84□□□□□ -1.31
TOP1-201ENST00000361337 C20orf173Q96LM9 149 aa6.84□□□□□ -1.31
TOP1-201ENST00000361337 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
TOP1-201ENST00000361337 NEXN-AS1Q8NBZ9 246 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
TOP1-201ENST00000361337 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
TOP1-201ENST00000361337 SLURP1P55000 103 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 RHOHQ15669 191 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 UNQ9165/PRO28630Q6UXU0 137 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 FAM110DQ8TAY7 271 aaPredicted RBP6.83□□□□□ -1.32
TOP1-201ENST00000361337 BAALCQ8WXS3 180 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 SMIM9A6NGZ8 99 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 KNCNA6PVL3 124 aa6.83□□□□□ -1.32
TOP1-201ENST00000361337 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
TOP1-201ENST00000361337 TIMM21Q9BVV7 248 aa6.82□□□□□ -1.32
TOP1-201ENST00000361337 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 C18orf65Q6ZTR6 163 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 ATP6V0E2Q8NHE4 81 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 A0A0J9YXV3 536 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 CRYGDP07320 174 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 DPH3P1Q9H4G8 78 aa6.81□□□□□ -1.32
TOP1-201ENST00000361337 CSDC2Q9Y534 153 aaKnown RBP6.81□□□□□ -1.32
TOP1-201ENST00000361337 GNRH2O43555 120 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 LY6G6DO95868 133 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 Q6ZSV7 163 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 TSHBP01222 138 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 JPT2Q9H910 190 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 HIVEP1P15822 2718 aa6.8□□□□□ -1.32
TOP1-201ENST00000361337 TRAV12-2A0A075B6T6 113 aa6.79□□□□□ -1.32
TOP1-201ENST00000361337 DNAJC9-AS1A6NH13 148 aa6.79□□□□□ -1.32
TOP1-201ENST00000361337 RPL35AP18077 110 aaKnown RBP6.79□□□□□ -1.32
TOP1-201ENST00000361337 RBM3P98179 157 aaKnown RBP6.79□□□□□ -1.32
TOP1-201ENST00000361337 C9orf47Q6ZRZ4 202 aa6.79□□□□□ -1.32
TOP1-201ENST00000361337 ZFAND2AQ8N6M9 145 aa6.79□□□□□ -1.32
TOP1-201ENST00000361337 Q9HAA7 133 aa6.79□□□□□ -1.32
TOP1-201ENST00000361337 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
TOP1-201ENST00000361337 J3QLI3 93 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms