RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 LINC00587B1AMM8 73 aa15.32■□□□□ 0.04
HOXA4-201ENST00000360046 I3L3M4 83 aa15.32■□□□□ 0.04
HOXA4-201ENST00000360046 ESDP10768 282 aa15.32■□□□□ 0.04
HOXA4-201ENST00000360046 FCER1GP30273 86 aa15.31■□□□□ 0.04
HOXA4-201ENST00000360046 UBE2D3P61077 147 aa15.31■□□□□ 0.04
HOXA4-201ENST00000360046 PKIAP61925 76 aa15.31■□□□□ 0.04
HOXA4-201ENST00000360046 UBE2D2P62837 147 aa15.31■□□□□ 0.04
HOXA4-201ENST00000360046 PMCHL1Q16048 86 aa15.31■□□□□ 0.04
HOXA4-201ENST00000360046 FAM19A2Q8N3H0 131 aa15.31■□□□□ 0.04
HOXA4-201ENST00000360046 LAGE3Q14657 143 aa15.3■□□□□ 0.04
HOXA4-201ENST00000360046 TRAV10A0A0B4J240 114 aa15.29■□□□□ 0.04
HOXA4-201ENST00000360046 LINC01546A6NGU7 62 aa15.29■□□□□ 0.04
HOXA4-201ENST00000360046 TSTD3H0UI37 97 aa15.29■□□□□ 0.04
HOXA4-201ENST00000360046 DAZ4Q86SG3 579 aaKnown RBP15.29■□□□□ 0.04
HOXA4-201ENST00000360046 DAZ3Q9NR90 486 aaKnown RBP15.29■□□□□ 0.04
HOXA4-201ENST00000360046 IGHV1-24A0A0C4DH33 117 aa15.29■□□□□ 0.04
HOXA4-201ENST00000360046 TSHBP01222 138 aa15.29■□□□□ 0.04
HOXA4-201ENST00000360046 AMTP48728 403 aa15.29■□□□□ 0.04
HOXA4-201ENST00000360046 K7EMI3 77 aa15.28■□□□□ 0.04
HOXA4-201ENST00000360046 LINC00694P0DN24 101 aa15.28■□□□□ 0.04
HOXA4-201ENST00000360046 ORMDL2Q53FV1 153 aa15.28■□□□□ 0.04
HOXA4-201ENST00000360046 NUDT3O95989 172 aa15.27■□□□□ 0.04
HOXA4-201ENST00000360046 COTL1Q14019 142 aa15.27■□□□□ 0.04
HOXA4-201ENST00000360046 A0A096LPF7 62 aa15.26■□□□□ 0.03
HOXA4-201ENST00000360046 ICOSQ9Y6W8 199 aa15.26■□□□□ 0.03
HOXA4-201ENST00000360046 ATP6V0E2Q8NHE4 81 aa15.26■□□□□ 0.03
HOXA4-201ENST00000360046 BTF3P20290 206 aaKnown RBP15.25■□□□□ 0.03
HOXA4-201ENST00000360046 HBDP02042 147 aa15.24■□□□□ 0.03
HOXA4-201ENST00000360046 MRPL23Q16540 153 aaKnown RBP15.24■□□□□ 0.03
HOXA4-201ENST00000360046 A0A096LNJ9 63 aa15.23■□□□□ 0.03
HOXA4-201ENST00000360046 H3BNG1 76 aa15.23■□□□□ 0.03
HOXA4-201ENST00000360046 CDPF1Q6NVV7 123 aa15.23■□□□□ 0.03
HOXA4-201ENST00000360046 TGP01266 2768 aa15.22■□□□□ 0.03
HOXA4-201ENST00000360046 C2orf66Q6UXQ4 117 aa15.2■□□□□ 0.02
HOXA4-201ENST00000360046 NTM-AS1Q6ZSK4 140 aa15.2■□□□□ 0.02
HOXA4-201ENST00000360046 SH2D6Q7Z4S9 175 aa15.2■□□□□ 0.02
HOXA4-201ENST00000360046 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
HOXA4-201ENST00000360046 LEPROTL1O95214 131 aa15.19■□□□□ 0.02
HOXA4-201ENST00000360046 G0S2P27469 103 aa15.19■□□□□ 0.02
HOXA4-201ENST00000360046 CYSLTR1Q9Y271 337 aa15.19■□□□□ 0.02
HOXA4-201ENST00000360046 DDTP30046 118 aa15.18■□□□□ 0.02
HOXA4-201ENST00000360046 RPL39P62891 51 aaKnown RBP15.18■□□□□ 0.02
HOXA4-201ENST00000360046 CHCHD7Q9BUK0 85 aa15.18■□□□□ 0.02
HOXA4-201ENST00000360046 SCGB1D1O95968 90 aa15.17■□□□□ 0.02
HOXA4-201ENST00000360046 TMEM97Q5BJF2 176 aa15.17■□□□□ 0.02
HOXA4-201ENST00000360046 C20orf203Q8NBC4 194 aa15.17■□□□□ 0.02
HOXA4-201ENST00000360046 TRBV25-1A0A075B6N4 114 aa15.17■□□□□ 0.02
HOXA4-201ENST00000360046 TOMM6Q96B49 74 aa15.17■□□□□ 0.02
HOXA4-201ENST00000360046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.16■□□□□ 0.02
HOXA4-201ENST00000360046 TRBV6-8A0A0A6YYG3 113 aa15.16■□□□□ 0.02
HOXA4-201ENST00000360046 IGKV2-29A2NJV5 120 aaPredicted RBP15.16■□□□□ 0.02
HOXA4-201ENST00000360046 IGLL5B9A064 214 aa15.16■□□□□ 0.02
HOXA4-201ENST00000360046 LINC00173Q6ZV60 143 aa15.15■□□□□ 0.02
HOXA4-201ENST00000360046 HSPB8Q9UJY1 196 aa15.15■□□□□ 0.02
HOXA4-201ENST00000360046 ZNF664Q8N3J9 261 aa15.14■□□□□ 0.01
HOXA4-201ENST00000360046 TMEM243Q9BU79 118 aa15.14■□□□□ 0.01
HOXA4-201ENST00000360046 C15orf53Q8NAA6 179 aa15.14■□□□□ 0.01
HOXA4-201ENST00000360046 SCGB3A1Q96QR1 104 aa15.14■□□□□ 0.01
HOXA4-201ENST00000360046 DNAH7Q8WXX0 4024 aa15.13■□□□□ 0.01
HOXA4-201ENST00000360046 UBE2L6O14933 153 aa15.13■□□□□ 0.01
HOXA4-201ENST00000360046 CHCHD5Q9BSY4 110 aa15.12■□□□□ 0.01
HOXA4-201ENST00000360046 LINC01549A6NIU2 74 aa15.12■□□□□ 0.01
HOXA4-201ENST00000360046 LBHQ53QV2 105 aaPredicted RBP15.12■□□□□ 0.01
HOXA4-201ENST00000360046 CEMP1Q6PRD7 247 aaPredicted RBP15.12■□□□□ 0.01
HOXA4-201ENST00000360046 PRO1933Q9H354 126 aa15.12■□□□□ 0.01
HOXA4-201ENST00000360046 LYPD5Q6UWN5 251 aa15.11■□□□□ 0.01
HOXA4-201ENST00000360046 ATP5LO75964 103 aa15.1■□□□□ 0.01
HOXA4-201ENST00000360046 KRTDAPP60985 99 aa15.1■□□□□ 0.01
HOXA4-201ENST00000360046 ERASQ7Z444 233 aa15.1■□□□□ 0.01
HOXA4-201ENST00000360046 IFI27L1Q96BM0 104 aa15.1■□□□□ 0.01
HOXA4-201ENST00000360046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.09■□□□□ 0.01
HOXA4-201ENST00000360046 CSMD3Q7Z407 3707 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 NUPR2A6NF83 97 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 H0Y8G0 127 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 GAGE6Q13070 117 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 ZFAND6Q6FIF0 208 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 C14orf144Q96I85 54 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 MAP1LC3CQ9BXW4 147 aa15.09■□□□□ 0.01
HOXA4-201ENST00000360046 IGIPA6NJ69 53 aa15.08■□□□□ 0
HOXA4-201ENST00000360046 LELP1Q5T871 98 aa15.08■□□□□ 0
HOXA4-201ENST00000360046 WWC2-AS2Q96NR7 200 aa15.08■□□□□ 0
HOXA4-201ENST00000360046 UBE2D4Q9Y2X8 147 aa15.08■□□□□ 0
HOXA4-201ENST00000360046 C3orf79P0CE67 100 aa15.07■□□□□ 0
HOXA4-201ENST00000360046 FGF6P10767 208 aa15.07■□□□□ 0
HOXA4-201ENST00000360046 AMMECR1LQ6DCA0 310 aa15.07■□□□□ 0
HOXA4-201ENST00000360046 TEX43Q6ZNM6 134 aa15.07■□□□□ 0
HOXA4-201ENST00000360046 TIMM17AQ99595 171 aa15.07■□□□□ 0
HOXA4-201ENST00000360046 KLK5Q9Y337 293 aaPredicted RBP15.07■□□□□ 0
HOXA4-201ENST00000360046 TIRAPP58753 221 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 ESRGQ1W209 222 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 Q6ZN92 141 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 TMEM141Q96I45 108 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 SPANXA1Q9NS26 97 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 H7C423 109 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 SMAGPQ0VAQ4 97 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 DGAT2L7PQ6IED9 249 aa15.06■□□□□ 0
HOXA4-201ENST00000360046 TMEM262E9PQX1 116 aa15.05■□□□□ -0
HOXA4-201ENST00000360046 PRSS1P07477 247 aa15.05■□□□□ -0
HOXA4-201ENST00000360046 MUC7Q8TAX7 377 aa15.05■□□□□ -0
HOXA4-201ENST00000360046 OPRPNQ99935 248 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms