RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
PDLIM7-202ENST00000355841 TSTD3H0UI37 97 aa12.22□□□□□ -0.45
PDLIM7-202ENST00000355841 LELP1Q5T871 98 aa12.22□□□□□ -0.45
PDLIM7-202ENST00000355841 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
PDLIM7-202ENST00000355841 CDPF1Q6NVV7 123 aa12.21□□□□□ -0.45
PDLIM7-202ENST00000355841 SIVA1O15304 175 aa12.2□□□□□ -0.46
PDLIM7-202ENST00000355841 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-202ENST00000355841 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-202ENST00000355841 TRAPPC1Q9Y5R8 145 aa12.2□□□□□ -0.46
PDLIM7-202ENST00000355841 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 DNAH6Q9C0G6 4158 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 D6R8Y8 96 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 CKS2P33552 79 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 Q8N3U1 123 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 NRACQ8N912 160 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 KRTAP1-5Q9BYS1 174 aa12.19□□□□□ -0.46
PDLIM7-202ENST00000355841 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
PDLIM7-202ENST00000355841 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
PDLIM7-202ENST00000355841 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
PDLIM7-202ENST00000355841 NBDYA0A0U1RRE5 68 aa12.17□□□□□ -0.46
PDLIM7-202ENST00000355841 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
PDLIM7-202ENST00000355841 DDTP30046 118 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 COX19Q49B96 90 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 IGHV3-30P01768 117 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 IGHV3-33P01772 117 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 IGHV3-30-3P0DP02 117 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 IGHV3-30-5P0DP03 117 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 Q6ZR54 194 aa12.16□□□□□ -0.46
PDLIM7-202ENST00000355841 IQCJQ1A5X6 159 aa12.15□□□□□ -0.46
PDLIM7-202ENST00000355841 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.46
PDLIM7-202ENST00000355841 TNFRSF6BO95407 300 aa12.14□□□□□ -0.47
PDLIM7-202ENST00000355841 NPYP01303 97 aa12.14□□□□□ -0.47
PDLIM7-202ENST00000355841 DNAH10OSP0CZ25 163 aa12.14□□□□□ -0.47
PDLIM7-202ENST00000355841 ESDP10768 282 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 COTL1Q14019 142 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 CHCHD5Q9BSY4 110 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 MT-ND6P03923 174 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 PMCHP20382 165 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 SUMO2P61956 95 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 PRELID3AQ96N28 172 aa12.13□□□□□ -0.47
PDLIM7-202ENST00000355841 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 I3L3M4 83 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 PPP1R17O96001 155 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 PPBPP02775 128 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 LBHQ53QV2 105 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 NIT1Q86X76 327 aa12.12□□□□□ -0.47
PDLIM7-202ENST00000355841 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
PDLIM7-202ENST00000355841 APCSP02743 223 aa12.11□□□□□ -0.47
PDLIM7-202ENST00000355841 GAGE6Q13070 117 aa12.11□□□□□ -0.47
PDLIM7-202ENST00000355841 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
PDLIM7-202ENST00000355841 GNB1LQ9BYB4 327 aa12.11□□□□□ -0.47
PDLIM7-202ENST00000355841 TRBV27A0A0K0K1C4 114 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 TSHBP01222 138 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 AMTP48728 403 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 TTC32Q5I0X7 151 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 MRPL18Q9H0U6 180 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 Q0VG73 95 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 TMEM243Q9BU79 118 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 PRO1933Q9H354 126 aa12.1□□□□□ -0.47
PDLIM7-202ENST00000355841 VCYO14598 125 aa12.09□□□□□ -0.47
PDLIM7-202ENST00000355841 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
PDLIM7-202ENST00000355841 ZNF664Q8N3J9 261 aa12.09□□□□□ -0.47
PDLIM7-202ENST00000355841 C20orf78Q9BR46 151 aa12.09□□□□□ -0.47
PDLIM7-202ENST00000355841 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
PDLIM7-202ENST00000355841 A0A087WX48 190 aa12.08□□□□□ -0.48
PDLIM7-202ENST00000355841 Q8N976 141 aa12.08□□□□□ -0.48
PDLIM7-202ENST00000355841 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
PDLIM7-202ENST00000355841 C1orf134Q5TEV5 83 aa12.07□□□□□ -0.48
PDLIM7-202ENST00000355841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 FCER1GP30273 86 aa12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
PDLIM7-202ENST00000355841 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 UBE2L6O14933 153 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 TCAPO15273 167 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 RBX1P62877 108 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 KIR2DL4Q99706 377 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 C2orf88Q9BSF0 95 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 KLK12Q9UKR0 248 aa12.05□□□□□ -0.48
PDLIM7-202ENST00000355841 RTL8CO15255 209 aa12.04□□□□□ -0.48
PDLIM7-202ENST00000355841 Q9HAA7 133 aa12.04□□□□□ -0.48
PDLIM7-202ENST00000355841 LAMTOR2Q9Y2Q5 125 aa12.04□□□□□ -0.48
PDLIM7-202ENST00000355841 IBA57-AS1B1ANH7 110 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 RPL32P62910 135 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms