RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 COX19Q49B96 90 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 ZFP2Q6ZN57 461 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 Q6ZVH6 145 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 ZNRF2Q8NHG8 242 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 CHCHD7Q9BUK0 85 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 RHPN1-AS1Q9BWJ2 59 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 DAZ1Q9NQZ3 744 aaKnown RBP1.62□□□□□ -2.15
VPS54-202ENST00000354504 C22orf24Q9Y442 160 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 LOC389332A0A1B0GUA5 103 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 TAX1BP3O14907 124 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 DLEU1O43261 78 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 CD28P10747 220 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 AZU1P20160 251 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 FXYD7P58549 80 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 KRTDAPP60985 99 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 LGALS9BQ3B8N2 356 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 LGALS9CQ6DKI2 356 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 ZNF705AQ6ZN79 300 aaPredicted RBP1.62□□□□□ -2.15
VPS54-202ENST00000354504 LINC01600Q96MT4 127 aa1.62□□□□□ -2.15
VPS54-202ENST00000354504 TRBV7-3A0A075B6L6 115 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 IGHV1OR15-1A0A075B7D0 117 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 A0A1B0GV90 55 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 K7EQM0 130 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 SCGB2A1O75556 95 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 IGLV1-51P01701 117 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 S100A4P26447 101 aaKnown RBP1.61□□□□□ -2.15
VPS54-202ENST00000354504 TSPOP30536 169 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 HILS1P60008 231 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 SCGB2A2Q13296 93 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 BATFQ16520 125 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 NTM-AS1Q6ZSK4 140 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 ATOH7Q8N100 152 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 LINC00469Q8N7U9 141 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 Q8N8P6 123 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 CITED1Q99966 193 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 YAE1D1Q9NRH1 226 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 RNF24Q9Y225 148 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 MRPS16Q9Y3D3 137 aaKnown RBP1.61□□□□□ -2.15
VPS54-202ENST00000354504 SRRM2Q9UQ35 2752 aaKnown RBP1.61□□□□□ -2.15
VPS54-202ENST00000354504 IGHV3OR16-12A0A075B7B8 117 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 IGLV5-45A0A087WSX0 123 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 TRAV12-1A0A0B4J245 112 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 FABP5P3A8MUU1 101 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 LINC01619G3V211 115 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 HSBP1O75506 76 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 SYNJ2BPP57105 145 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 RNASEKQ6P5S7 137 aaKnown RBP1.61□□□□□ -2.15
VPS54-202ENST00000354504 FER1L6-AS1Q8NA97 138 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 LINC00477Q96M19 166 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 METTL26Q96S19 204 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 LAMTOR2Q9Y2Q5 125 aa1.61□□□□□ -2.15
VPS54-202ENST00000354504 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
VPS54-202ENST00000354504 IGLV5-37A0A075B6J1 123 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TRAV9-2A0A087WT02 112 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 A0A087WYN8 130 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 J3QKU1 62 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 ZNF688P0C7X2 276 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 COX8AP10176 69 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 NSUN5P1Q3KNT7 163 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 BVES-AS1Q5T3Y7 98 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 CYB5R2Q6BCY4 276 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TMEM61Q8N0U2 210 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 ZNF738Q8NE65 137 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 OR9G4Q8NGQ1 327 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 BAALCQ8WXS3 180 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 PMCHL2Q9BQD1 86 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 PRO0461Q9UI25 63 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 UFC1Q9Y3C8 167 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TMEM189A5PLL7 270 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 OR4C46A6NHA9 309 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 F5H768 121 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TCF21O43680 179 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 FCER1GP30273 86 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 CFAP126Q5VTH2 177 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TTTY13Q9BZ97 58 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 PAM16Q9Y3D7 125 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 IGLV9-49A0A0B4J1Y8 123 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 F8WDY8 70 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 K7EP13 123 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 RS1O15537 224 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 ZNF876PQ49A33 203 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TMEM78Q5T7P6 136 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 ZC2HC1BQ5TFG8 222 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 FAM74A4Q5TZK3 123 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 KRTAP26-1Q6PEX3 210 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 FOXI2Q6ZQN5 318 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 S100A7AQ86SG5 101 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 NFE4Q86UQ8 179 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 PCP2Q8IVA1 136 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 OR2K2Q8NGT1 345 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 BORCS7Q96B45 105 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 OVOL2Q9BRP0 275 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 WFDC10AQ9H1F0 79 aa1.6□□□□□ -2.15
VPS54-202ENST00000354504 TRAV12-2A0A075B6T6 113 aa1.59□□□□□ -2.15
VPS54-202ENST00000354504 C7orf71A4D174 169 aa1.59□□□□□ -2.15
VPS54-202ENST00000354504 M0R2Z0 102 aa1.59□□□□□ -2.15
VPS54-202ENST00000354504 CCL25O15444 150 aa1.59□□□□□ -2.15
VPS54-202ENST00000354504 CIDEAO60543 219 aa1.59□□□□□ -2.15
VPS54-202ENST00000354504 LY6G6DO95868 133 aa1.59□□□□□ -2.15
VPS54-202ENST00000354504 CD7P09564 240 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms