RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 DCANP1Q8TF63 244 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 RNF5Q99942 180 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 PKIGQ9Y2B9 76 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 PRRC2AP48634 2157 aaKnown RBP8.86□□□□□ -0.99
RTN3-203ENST00000341307 PFN2P35080 140 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 PDE6HQ13956 83 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 NPBQ8NG41 125 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 IGKV3D-20A0A0C4DH25 116 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 SAA4P35542 130 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 TMEM86BQ8N661 226 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 C11orf21Q9P2W6 132 aa8.86□□□□□ -0.99
RTN3-203ENST00000341307 IGHV4-61A0A0C4DH41 118 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 I3L2K1 104 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 SUMO2P61956 95 aaKnown RBP8.85□□□□□ -0.99
RTN3-203ENST00000341307 RHOHQ15669 191 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 ABCA2Q9BZC7 2435 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 IGHV7-4-1A0A0J9YVY3 117 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
RTN3-203ENST00000341307 RS1O15537 224 aa8.84□□□□□ -0.99
RTN3-203ENST00000341307 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
RTN3-203ENST00000341307 IGFL4Q6B9Z1 124 aa8.84□□□□□ -0.99
RTN3-203ENST00000341307 K7EIM0 57 aa8.84□□□□□ -0.99
RTN3-203ENST00000341307 Q6ZSV7 163 aa8.84□□□□□ -0.99
RTN3-203ENST00000341307 Q8N6K4 173 aa8.84□□□□□ -0.99
RTN3-203ENST00000341307 RPL39LQ96EH5 51 aaKnown RBP8.84□□□□□ -0.99
RTN3-203ENST00000341307 TRAV8-3A0A0A6YYJ7 113 aa8.83□□□□□ -1
RTN3-203ENST00000341307 IGHV3-23P01764 117 aa8.83□□□□□ -1
RTN3-203ENST00000341307 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
RTN3-203ENST00000341307 MINOS1Q5TGZ0 78 aa8.83□□□□□ -1
RTN3-203ENST00000341307 RNF125Q96EQ8 232 aa8.83□□□□□ -1
RTN3-203ENST00000341307 MINOS1-NBL1R4GNA1 71 aa8.83□□□□□ -1
RTN3-203ENST00000341307 ACANP16112 2415 aa8.83□□□□□ -1
RTN3-203ENST00000341307 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
RTN3-203ENST00000341307 BRD3OSQ6XYD6 125 aa8.83□□□□□ -1
RTN3-203ENST00000341307 SERP2Q8N6R1 65 aa8.83□□□□□ -1
RTN3-203ENST00000341307 PEMTQ9UBM1 199 aa8.83□□□□□ -1
RTN3-203ENST00000341307 TIMM21Q9BVV7 248 aa8.82□□□□□ -1
RTN3-203ENST00000341307 I3L3M4 83 aa8.82□□□□□ -1
RTN3-203ENST00000341307 Q8N9W7 124 aa8.82□□□□□ -1
RTN3-203ENST00000341307 IGHV7-81A0A0B4J1V7 117 aa8.81□□□□□ -1
RTN3-203ENST00000341307 IGIPA6NJ69 53 aa8.81□□□□□ -1
RTN3-203ENST00000341307 COX6CP09669 75 aa8.81□□□□□ -1
RTN3-203ENST00000341307 FANCD2OSQ96PS1 177 aa8.81□□□□□ -1
RTN3-203ENST00000341307 SLC50A1Q9BRV3 221 aa8.81□□□□□ -1
RTN3-203ENST00000341307 IGHV4-4A0A075B6R2 117 aa8.81□□□□□ -1
RTN3-203ENST00000341307 C9orf85Q96MD7 179 aa8.81□□□□□ -1
RTN3-203ENST00000341307 HIVEP1P15822 2718 aa8.8□□□□□ -1
RTN3-203ENST00000341307 TEP1Q99973 2627 aaKnown RBP8.8□□□□□ -1
RTN3-203ENST00000341307 FLNAP21333 2647 aaKnown RBP8.79□□□□□ -1
RTN3-203ENST00000341307 IGLV11-55A0A075B6I3 123 aa8.79□□□□□ -1
RTN3-203ENST00000341307 LEPROTO15243 131 aa8.79□□□□□ -1
RTN3-203ENST00000341307 ECSCRQ19T08 205 aa8.79□□□□□ -1
RTN3-203ENST00000341307 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
RTN3-203ENST00000341307 LITAFQ99732 161 aa8.79□□□□□ -1
RTN3-203ENST00000341307 AVPP01185 164 aa8.79□□□□□ -1
RTN3-203ENST00000341307 ZNF415Q09FC8 603 aa8.79□□□□□ -1
RTN3-203ENST00000341307 FHL2Q14192 279 aa8.79□□□□□ -1
RTN3-203ENST00000341307 TP53TG1Q9Y2A0 90 aa8.79□□□□□ -1
RTN3-203ENST00000341307 IGHV3OR16-8A0A075B7F1 116 aa8.78□□□□□ -1
RTN3-203ENST00000341307 IGHV3-35A0A0C4DH35 117 aa8.78□□□□□ -1
RTN3-203ENST00000341307 A0A0J9YXY3 114 aa8.78□□□□□ -1
RTN3-203ENST00000341307 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
RTN3-203ENST00000341307 EPM2AB3EWF7 344 aa8.78□□□□□ -1
RTN3-203ENST00000341307 PRAC2D3DTV9 90 aa8.78□□□□□ -1
RTN3-203ENST00000341307 F8W735 103 aaPredicted RBP8.78□□□□□ -1
RTN3-203ENST00000341307 IGHV4-38-2P0DP08 117 aa8.78□□□□□ -1
RTN3-203ENST00000341307 FAM236CP0DP71 79 aa8.78□□□□□ -1
RTN3-203ENST00000341307 ZNF876PQ49A33 203 aa8.78□□□□□ -1
RTN3-203ENST00000341307 V9GYY9 64 aa8.78□□□□□ -1
RTN3-203ENST00000341307 G3V318 75 aa8.78□□□□□ -1
RTN3-203ENST00000341307 ATP6V0E1O15342 81 aa8.78□□□□□ -1
RTN3-203ENST00000341307 PRSS2P07478 247 aa8.78□□□□□ -1
RTN3-203ENST00000341307 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 RPL39P62891 51 aaKnown RBP8.77□□□□□ -1.01
RTN3-203ENST00000341307 ZNF580Q9UK33 172 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 SMAD5-AS1Q9Y6J3 95 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 CSPG4Q6UVK1 2322 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 TLN2Q9Y4G6 2542 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 IGHV1-69DA0A0B4J2H0 117 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 A0A0J9YX75 114 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 SDHAF1A6NFY7 115 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 MAPK1IP1LQ8NDC0 245 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
RTN3-203ENST00000341307 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
RTN3-203ENST00000341307 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
RTN3-203ENST00000341307 C16orf95Q9H693 158 aa8.76□□□□□ -1.01
RTN3-203ENST00000341307 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
RTN3-203ENST00000341307 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
RTN3-203ENST00000341307 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
RTN3-203ENST00000341307 IGHV1-69P01742 117 aa8.76□□□□□ -1.01
RTN3-203ENST00000341307 TIRAPP58753 221 aa8.76□□□□□ -1.01
RTN3-203ENST00000341307 WFDC11Q8NEX6 87 aa8.76□□□□□ -1.01
RTN3-203ENST00000341307 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 SYNJ2BPP57105 145 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 MTORP42345 2549 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 CUBNO60494 3623 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms