RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 LOC107984640A0A0U1RRK4 108 aa1.59□□□□□ -2.16
HIF1A-201ENST00000323441 GAGE12HA6NDE8 117 aa1.59□□□□□ -2.16
HIF1A-201ENST00000323441 FOXI1Q12951 378 aa1.59□□□□□ -2.16
HIF1A-201ENST00000323441 PRNTQ86SH4 94 aa1.59□□□□□ -2.16
HIF1A-201ENST00000323441 KRTAP13-1Q8IUC0 172 aa1.59□□□□□ -2.16
HIF1A-201ENST00000323441 AQP10Q96PS8 301 aa1.59□□□□□ -2.16
HIF1A-201ENST00000323441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 ARMS2P0C7Q2 107 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 MEF2BQ02080 365 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 FAM74A4Q5TZK3 123 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 HYLS1Q96M11 299 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 DERL1Q9BUN8 251 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 FLVCR2Q9UPI3 526 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 PHLDA3Q9Y5J5 127 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 B4DEV8 164 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 H3BVH4 76 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 EIF3GO75821 320 aaKnown RBP eCLIP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 TLX1NBP0CAT3 122 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 TPT1P13693 172 aaKnown RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 NUP35Q8NFH5 326 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 CARD19Q96LW7 228 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 NAA50Q9GZZ1 169 aaKnown RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 LSM5Q9Y4Y9 91 aaKnown RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 V9GYH0 126 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 IGHV1-58A0A0C4DH39 117 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 H3BMQ9 156 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 H7C423 109 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 M0R2T5 61 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 NUPR1O60356 82 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 FGF6P10767 208 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 TMBIM6P55061 237 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 RPS29P62273 56 aaKnown RBP1.58□□□□□ -2.16
HIF1A-201ENST00000323441 GAGE6Q13070 117 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 ZNF674Q2M3X9 581 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 CLPSL2Q6UWE3 100 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 LINC00337Q8N6G1 96 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 EPDR1Q9UM22 224 aa1.58□□□□□ -2.16
HIF1A-201ENST00000323441 IGLV4-60A0A075B6I1 120 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 SNAI2O43623 268 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 ATP6V1G2O95670 118 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 GNG5P63218 68 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 ISOC2Q96AB3 205 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 KIR2DL4Q99706 377 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 TMEM243Q9BU79 118 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 ZFP30Q9Y2G7 519 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 F8WDY8 70 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 OR5AL1P0C617 328 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 STAG3L2P0CL84 134 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 STAG3L3P0CL85 134 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 BTCP35070 178 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 RAB32Q13637 225 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 PYDC2Q56P42 97 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 THAP6Q8TBB0 222 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 FAM210AQ96ND0 272 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 NKX6-2Q9C056 277 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-201ENST00000323441 ARL2-SNX15V9GYD0 113 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 A0A1B0GVG6 124 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 A0A1W2PRE2 83 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 CRIP1P50238 77 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 NHLH2Q02577 135 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 ZNF56Q15929 161 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 SPAG11AQ6PDA7 123 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 TCEAL7Q9BRU2 100 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 TMEM167BQ9NRX6 74 aa1.57□□□□□ -2.16
HIF1A-201ENST00000323441 A0A1W2PPV4 95 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 M0QY20 66 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 M0R381 172 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 RPL18AQ02543 176 aaKnown RBP1.56□□□□□ -2.16
HIF1A-201ENST00000323441 SYCNQ0VAF6 134 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 HIGD2BQ4VC39 106 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 Q86TA4 180 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 CHCHD10Q8WYQ3 142 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-201ENST00000323441 HIST1H2BAQ96A08 127 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 C2orf48Q96LS8 159 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 ZNF471Q9BX82 626 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-201ENST00000323441 IGLV4-69A0A075B6H9 119 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 CENPXA8MT69 81 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 CCL25O15444 150 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 SH2D1AO60880 128 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 APOMO95445 188 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 NCR2O95944 276 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 ESDP10768 282 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 ZNF25P17030 456 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-201ENST00000323441 SULT1A2P50226 295 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 SGK494Q96LW2 274 aa1.56□□□□□ -2.16
HIF1A-201ENST00000323441 UBE2L6O14933 153 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 ARL14EPLP0DKL9 152 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 GCHFRP30047 84 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 CAMPP49913 170 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 OR5A1Q8NGJ0 315 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 ANAPC16Q96DE5 110 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 FMC1Q96HJ9 113 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 CXorf1O96002 111 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 LTAP01374 205 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 MBP02144 154 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 RPL12P30050 165 aaKnown RBP1.55□□□□□ -2.16
HIF1A-201ENST00000323441 CDC34P49427 236 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-201ENST00000323441 CD164L2Q6UWJ8 174 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 SCGB1C1Q8TD33 95 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms