RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ATRAIDQ6UW56 229 aa12.2□□□□□ -0.46
SSSCA1-201ENST00000309328 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
SSSCA1-201ENST00000309328 H7C423 109 aa12.19□□□□□ -0.46
SSSCA1-201ENST00000309328 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
SSSCA1-201ENST00000309328 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
SSSCA1-201ENST00000309328 NIT1Q86X76 327 aa12.19□□□□□ -0.46
SSSCA1-201ENST00000309328 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
SSSCA1-201ENST00000309328 UBE2L6O14933 153 aa12.18□□□□□ -0.46
SSSCA1-201ENST00000309328 FCER1GP30273 86 aa12.18□□□□□ -0.46
SSSCA1-201ENST00000309328 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
SSSCA1-201ENST00000309328 LAGE3Q14657 143 aa12.18□□□□□ -0.46
SSSCA1-201ENST00000309328 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
SSSCA1-201ENST00000309328 RYR2Q92736 4967 aa12.17□□□□□ -0.46
SSSCA1-201ENST00000309328 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
SSSCA1-201ENST00000309328 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
SSSCA1-201ENST00000309328 NPYP01303 97 aa12.17□□□□□ -0.46
SSSCA1-201ENST00000309328 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
SSSCA1-201ENST00000309328 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
SSSCA1-201ENST00000309328 K7EMI3 77 aa12.16□□□□□ -0.46
SSSCA1-201ENST00000309328 M0R2N4 97 aa12.16□□□□□ -0.46
SSSCA1-201ENST00000309328 YPEL4Q96NS1 127 aa12.16□□□□□ -0.46
SSSCA1-201ENST00000309328 A0A1B0GUV1 79 aa12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 TSHBP01222 138 aa12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 S100A1P23297 94 aa12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 C1orf134Q5TEV5 83 aa12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 TMEM18Q96B42 140 aa12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 MRPL18Q9H0U6 180 aaKnown RBP12.15□□□□□ -0.46
SSSCA1-201ENST00000309328 IBA57-AS1B1ANH7 110 aa12.14□□□□□ -0.47
SSSCA1-201ENST00000309328 CBLN2Q8IUK8 224 aa12.14□□□□□ -0.47
SSSCA1-201ENST00000309328 C6orf223Q8N319 242 aa12.14□□□□□ -0.47
SSSCA1-201ENST00000309328 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
SSSCA1-201ENST00000309328 TRAPPC1Q9Y5R8 145 aa12.14□□□□□ -0.47
SSSCA1-201ENST00000309328 TRAV8-3A0A0A6YYJ7 113 aa12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 IGHV3-30P01768 117 aa12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 IGHV3-30-5P0DP03 117 aa12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 RAB5AP20339 215 aa12.13□□□□□ -0.47
SSSCA1-201ENST00000309328 ESDP10768 282 aa12.12□□□□□ -0.47
SSSCA1-201ENST00000309328 Q0VG73 95 aa12.12□□□□□ -0.47
SSSCA1-201ENST00000309328 G0S2P27469 103 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 GAGE6Q13070 117 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 MPV17L2Q567V2 206 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 AMMECR1LQ6DCA0 310 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 LINC00336Q6ZUF6 198 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 Q8N8P6 123 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 RMI2Q96E14 147 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 HYDINQ4G0P3 5121 aa12.11□□□□□ -0.47
SSSCA1-201ENST00000309328 RBX1P62877 108 aa12.1□□□□□ -0.47
SSSCA1-201ENST00000309328 KIAA1644Q3SXP7 199 aa12.1□□□□□ -0.47
SSSCA1-201ENST00000309328 ALKBH7Q9BT30 221 aaPredicted RBP12.1□□□□□ -0.47
SSSCA1-201ENST00000309328 COX11Q9Y6N1 276 aa12.1□□□□□ -0.47
SSSCA1-201ENST00000309328 RYR3Q15413 4870 aa12.1□□□□□ -0.47
SSSCA1-201ENST00000309328 CRPP02741 224 aa12.09□□□□□ -0.47
SSSCA1-201ENST00000309328 ORMDL2Q53FV1 153 aa12.09□□□□□ -0.47
SSSCA1-201ENST00000309328 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
SSSCA1-201ENST00000309328 TMEM101Q96IK0 257 aa12.09□□□□□ -0.47
SSSCA1-201ENST00000309328 ANGP03950 147 aaKnown RBP12.08□□□□□ -0.48
SSSCA1-201ENST00000309328 TM2D2Q9BX73 214 aa12.08□□□□□ -0.48
SSSCA1-201ENST00000309328 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
SSSCA1-201ENST00000309328 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
SSSCA1-201ENST00000309328 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
SSSCA1-201ENST00000309328 FGF6P10767 208 aa12.07□□□□□ -0.48
SSSCA1-201ENST00000309328 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
SSSCA1-201ENST00000309328 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
SSSCA1-201ENST00000309328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 ATP6V1G1O75348 118 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 MIAQ16674 131 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 RNASEKQ6P5S7 137 aaKnown RBP12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 Q8N976 141 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
SSSCA1-201ENST00000309328 DGAT2L7PQ6IED9 249 aa12.05□□□□□ -0.48
SSSCA1-201ENST00000309328 Q8N3U1 123 aa12.05□□□□□ -0.48
SSSCA1-201ENST00000309328 SPANXA1Q9NS26 97 aa12.05□□□□□ -0.48
SSSCA1-201ENST00000309328 TRAV8-4A0A0B4J246 113 aa12.04□□□□□ -0.48
SSSCA1-201ENST00000309328 COLCA2A8K830 154 aa12.04□□□□□ -0.48
SSSCA1-201ENST00000309328 IFI27P40305 119 aaPredicted RBP12.04□□□□□ -0.48
SSSCA1-201ENST00000309328 RAB5BP61020 215 aa12.04□□□□□ -0.48
SSSCA1-201ENST00000309328 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
SSSCA1-201ENST00000309328 DNAH2Q9P225 4427 aa12.03□□□□□ -0.48
SSSCA1-201ENST00000309328 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
SSSCA1-201ENST00000309328 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 RTL8CO15255 209 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 NPSP0C0P6 89 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 REG3AQ06141 175 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 Q9HAA7 133 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 CYSLTR1Q9Y271 337 aa12.02□□□□□ -0.49
SSSCA1-201ENST00000309328 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
SSSCA1-201ENST00000309328 PSCAO43653 123 aa12.01□□□□□ -0.49
SSSCA1-201ENST00000309328 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms