RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 AMTP48728 403 aa18.58■□□□□ 0.56
HDAC3-201ENST00000305264 WFDC10BQ8IUB3 73 aa18.58■□□□□ 0.56
HDAC3-201ENST00000305264 IGHV1-24A0A0C4DH33 117 aa18.57■□□□□ 0.56
HDAC3-201ENST00000305264 NXT2Q9NPJ8 142 aaKnown RBP18.57■□□□□ 0.56
HDAC3-201ENST00000305264 LGALS9CQ6DKI2 356 aa18.56■□□□□ 0.56
HDAC3-201ENST00000305264 PRSS3P2Q8NHM4 247 aa18.56■□□□□ 0.56
HDAC3-201ENST00000305264 UPK3BQ9BT76 320 aa18.56■□□□□ 0.56
HDAC3-201ENST00000305264 CHCHD7Q9BUK0 85 aa18.56■□□□□ 0.56
HDAC3-201ENST00000305264 LINC00476Q8WZB0 136 aa18.55■□□□□ 0.56
HDAC3-201ENST00000305264 TRAV8-6A0A0B4J262 113 aa18.55■□□□□ 0.56
HDAC3-201ENST00000305264 TMEM243Q9BU79 118 aa18.54■□□□□ 0.56
HDAC3-201ENST00000305264 URB1-AS1Q96HZ7 61 aa18.53■□□□□ 0.56
HDAC3-201ENST00000305264 CHCHD5Q9BSY4 110 aa18.53■□□□□ 0.56
HDAC3-201ENST00000305264 LY6G6CO95867 125 aa18.52■□□□□ 0.56
HDAC3-201ENST00000305264 ESDP10768 282 aa18.52■□□□□ 0.56
HDAC3-201ENST00000305264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.51■□□□□ 0.55
HDAC3-201ENST00000305264 IGKV2-29A2NJV5 120 aaPredicted RBP18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BKO60814 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BJP06899 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BOP23527 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BBP33778 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BDP58876 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BCP62807 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST2H2BEQ16778 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.51■□□□□ 0.55
HDAC3-201ENST00000305264 Q8N3U1 123 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BHQ93079 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BNQ99877 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 HIST1H2BMQ99879 126 aa18.51■□□□□ 0.55
HDAC3-201ENST00000305264 GAGE6Q13070 117 aa18.5■□□□□ 0.55
HDAC3-201ENST00000305264 FA2HQ7L5A8 372 aa18.5■□□□□ 0.55
HDAC3-201ENST00000305264 NIT1Q86X76 327 aa18.5■□□□□ 0.55
HDAC3-201ENST00000305264 SIVA1O15304 175 aa18.49■□□□□ 0.55
HDAC3-201ENST00000305264 LAGE3Q14657 143 aa18.49■□□□□ 0.55
HDAC3-201ENST00000305264 Q9H8V8 135 aa18.49■□□□□ 0.55
HDAC3-201ENST00000305264 LINC01546A6NGU7 62 aa18.48■□□□□ 0.55
HDAC3-201ENST00000305264 Q0VG73 95 aa18.48■□□□□ 0.55
HDAC3-201ENST00000305264 KMT2AQ03164 3969 aa18.48■□□□□ 0.55
HDAC3-201ENST00000305264 C1orf196B1AJZ1 125 aa18.48■□□□□ 0.55
HDAC3-201ENST00000305264 RNASEKQ6P5S7 137 aaKnown RBP18.48■□□□□ 0.55
HDAC3-201ENST00000305264 K7EMI3 77 aa18.47■□□□□ 0.55
HDAC3-201ENST00000305264 UBE2L6O14933 153 aa18.47■□□□□ 0.55
HDAC3-201ENST00000305264 BAGE3Q86Y29 109 aa18.47■□□□□ 0.55
HDAC3-201ENST00000305264 C20orf203Q8NBC4 194 aa18.47■□□□□ 0.55
HDAC3-201ENST00000305264 SACSQ9NZJ4 4579 aa18.47■□□□□ 0.55
HDAC3-201ENST00000305264 TMEM262E9PQX1 116 aa18.46■□□□□ 0.55
HDAC3-201ENST00000305264 LINC00614P0C842 121 aa18.46■□□□□ 0.55
HDAC3-201ENST00000305264 ORMDL2Q53FV1 153 aa18.46■□□□□ 0.55
HDAC3-201ENST00000305264 MPV17L2Q567V2 206 aa18.46■□□□□ 0.55
HDAC3-201ENST00000305264 AP5S1Q9NUS5 200 aa18.46■□□□□ 0.55
HDAC3-201ENST00000305264 RPL39P62891 51 aaKnown RBP18.46■□□□□ 0.55
HDAC3-201ENST00000305264 DNAH10OSP0CZ25 163 aa18.45■□□□□ 0.54
HDAC3-201ENST00000305264 IGHV3-30P01768 117 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 IGHV3-33P01772 117 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 IGHV3-30-3P0DP02 117 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 IGHV3-30-5P0DP03 117 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 LINC00310P59036 64 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 LINC01556Q5JQF7 62 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 Q8N976 141 aa18.44■□□□□ 0.54
HDAC3-201ENST00000305264 RAB5BP61020 215 aa18.43■□□□□ 0.54
HDAC3-201ENST00000305264 KMT2CQ8NEZ4 4911 aaKnown RBP18.43■□□□□ 0.54
HDAC3-201ENST00000305264 A0A087WX48 190 aa18.42■□□□□ 0.54
HDAC3-201ENST00000305264 FGF6P10767 208 aa18.42■□□□□ 0.54
HDAC3-201ENST00000305264 H7C423 109 aa18.42■□□□□ 0.54
HDAC3-201ENST00000305264 SERF1AO75920 110 aa18.41■□□□□ 0.54
HDAC3-201ENST00000305264 BTF3P20290 206 aaKnown RBP18.41■□□□□ 0.54
HDAC3-201ENST00000305264 RBX1P62877 108 aa18.41■□□□□ 0.54
HDAC3-201ENST00000305264 PMCHL1Q16048 86 aa18.41■□□□□ 0.54
HDAC3-201ENST00000305264 C2orf66Q6UXQ4 117 aa18.41■□□□□ 0.54
HDAC3-201ENST00000305264 DNAH6Q9C0G6 4158 aa18.4■□□□□ 0.54
HDAC3-201ENST00000305264 HYDINQ4G0P3 5121 aa18.4■□□□□ 0.54
HDAC3-201ENST00000305264 LCE6AA0A183 80 aa18.4■□□□□ 0.54
HDAC3-201ENST00000305264 CHCHD1Q96BP2 118 aaKnown RBP18.4■□□□□ 0.54
HDAC3-201ENST00000305264 PKIAP61925 76 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 AMMECR1LQ6DCA0 310 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 TMEM18Q96B42 140 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 UBE2D4Q9Y2X8 147 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 IGLV4-60A0A075B6I1 120 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 A0A096LNJ9 63 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 KRTAP1-5Q9BYS1 174 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 CYSLTR1Q9Y271 337 aa18.39■□□□□ 0.53
HDAC3-201ENST00000305264 MRPL52Q86TS9 123 aaKnown RBP18.38■□□□□ 0.53
HDAC3-201ENST00000305264 NUPR1O60356 82 aa18.37■□□□□ 0.53
HDAC3-201ENST00000305264 A0A1B0GUV1 79 aa18.37■□□□□ 0.53
HDAC3-201ENST00000305264 TOMM6Q96B49 74 aa18.35■□□□□ 0.53
HDAC3-201ENST00000305264 NBDYA0A0U1RRE5 68 aa18.35■□□□□ 0.53
HDAC3-201ENST00000305264 ZNF25P17030 456 aaPredicted RBP18.35■□□□□ 0.53
HDAC3-201ENST00000305264 HSBP1O75506 76 aa18.34■□□□□ 0.53
HDAC3-201ENST00000305264 ANGP03950 147 aaKnown RBP18.34■□□□□ 0.53
HDAC3-201ENST00000305264 KLK12Q9UKR0 248 aa18.34■□□□□ 0.53
HDAC3-201ENST00000305264 TIMM21Q9BVV7 248 aa18.33■□□□□ 0.53
HDAC3-201ENST00000305264 M0R2N4 97 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 HBDP02042 147 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 NDUFA6P56556 154 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 FAM19A2Q8N3H0 131 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 OR5A1Q8NGJ0 315 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 TMEM101Q96IK0 257 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 SPANXA1Q9NS26 97 aa18.33■□□□□ 0.52
HDAC3-201ENST00000305264 G0S2P27469 103 aa18.32■□□□□ 0.52
HDAC3-201ENST00000305264 OPRPNQ99935 248 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms