RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
PCF11-201ENST00000298281 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
PCF11-201ENST00000298281 THSD7BQ9C0I4 1608 aa9.31□□□□□ -0.92
PCF11-201ENST00000298281 RSPO1Q2MKA7 263 aaPredicted RBP9.31□□□□□ -0.92
PCF11-201ENST00000298281 Q6ZUT4 128 aa9.31□□□□□ -0.92
PCF11-201ENST00000298281 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
PCF11-201ENST00000298281 LTBP1Q14766 1721 aa9.3□□□□□ -0.92
PCF11-201ENST00000298281 ANKHD1Q8IWZ3 2542 aaKnown RBP9.3□□□□□ -0.92
PCF11-201ENST00000298281 ZNF503-AS2A6NEH8 195 aa9.3□□□□□ -0.92
PCF11-201ENST00000298281 DIAPH2-AS1Q14236 149 aa9.3□□□□□ -0.92
PCF11-201ENST00000298281 CTRLP40313 264 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 K7EMT4 169 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 TCL1BO95988 128 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 SPATA12Q7Z6I5 190 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 XAGE1AQ9HD64 81 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 FAM222AQ5U5X8 452 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 FSHBP01225 129 aa9.29□□□□□ -0.92
PCF11-201ENST00000298281 C16orf54Q6UWD8 224 aa9.28□□□□□ -0.92
PCF11-201ENST00000298281 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
PCF11-201ENST00000298281 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
PCF11-201ENST00000298281 IGLV11-55A0A075B6I3 123 aa9.28□□□□□ -0.92
PCF11-201ENST00000298281 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
PCF11-201ENST00000298281 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
PCF11-201ENST00000298281 CTSZQ9UBR2 303 aa9.27□□□□□ -0.92
PCF11-201ENST00000298281 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
PCF11-201ENST00000298281 K7EN84 100 aa9.27□□□□□ -0.93
PCF11-201ENST00000298281 IGFL2Q6UWQ7 119 aa9.27□□□□□ -0.93
PCF11-201ENST00000298281 NFE4Q86UQ8 179 aa9.27□□□□□ -0.93
PCF11-201ENST00000298281 UFSP1Q6NVU6 142 aa9.27□□□□□ -0.93
PCF11-201ENST00000298281 A6NDX4 124 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 I3L2K1 104 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 INSL3P51460 131 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 NRGNQ92686 78 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 LOXL1Q08397 574 aaPredicted RBP9.26□□□□□ -0.93
PCF11-201ENST00000298281 K7EIM0 57 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 SLPIP03973 132 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 FAM30AQ9NZY2 134 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 MYCNOSP40205 109 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
PCF11-201ENST00000298281 C4orf3Q8WVX3 66 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 A0A0J9YXV3 536 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
PCF11-201ENST00000298281 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 SPINK1P00995 79 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 REG3AQ06141 175 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 TTC28Q96AY4 2481 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 C11orf53Q8IXP5 236 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 KIAA1549LQ6ZVL6 1849 aa9.25□□□□□ -0.93
PCF11-201ENST00000298281 BLCAPP62952 87 aa9.24□□□□□ -0.93
PCF11-201ENST00000298281 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
PCF11-201ENST00000298281 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
PCF11-201ENST00000298281 CSDC2Q9Y534 153 aaKnown RBP9.24□□□□□ -0.93
PCF11-201ENST00000298281 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
PCF11-201ENST00000298281 HIGD1BQ9P298 99 aa9.24□□□□□ -0.93
PCF11-201ENST00000298281 PTPRSQ13332 1948 aa9.23□□□□□ -0.93
PCF11-201ENST00000298281 C5orf56Q8N8D9 126 aa9.23□□□□□ -0.93
PCF11-201ENST00000298281 WT1P19544 449 aaPredicted RBP9.23□□□□□ -0.93
PCF11-201ENST00000298281 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
PCF11-201ENST00000298281 ZFHX2Q9C0A1 2572 aaPredicted RBP9.23□□□□□ -0.93
PCF11-201ENST00000298281 LY6LH3BQJ8 138 aa9.23□□□□□ -0.93
PCF11-201ENST00000298281 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
PCF11-201ENST00000298281 IGF1P05019 195 aa9.23□□□□□ -0.93
PCF11-201ENST00000298281 DAZAP2Q15038 168 aaPredicted RBP9.22□□□□□ -0.93
PCF11-201ENST00000298281 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
PCF11-201ENST00000298281 Q6Q795 121 aa9.22□□□□□ -0.93
PCF11-201ENST00000298281 CCKP06307 115 aa9.21□□□□□ -0.94
PCF11-201ENST00000298281 H3BT86 120 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 WFDC2Q14508 124 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 TRBV7-6A0A0J9YX20 115 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 E9PLD3 99 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 TOMM6Q96B49 74 aa9.2□□□□□ -0.94
PCF11-201ENST00000298281 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
PCF11-201ENST00000298281 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
PCF11-201ENST00000298281 ESRGQ1W209 222 aa9.19□□□□□ -0.94
PCF11-201ENST00000298281 LINC00337Q8N6G1 96 aa9.19□□□□□ -0.94
PCF11-201ENST00000298281 TRBV6-1A0A0K0K1D8 114 aa9.19□□□□□ -0.94
PCF11-201ENST00000298281 Q6ZSR3 168 aa9.19□□□□□ -0.94
PCF11-201ENST00000298281 PMAIP1Q13794 54 aa9.18□□□□□ -0.94
PCF11-201ENST00000298281 KRTAP27-1Q3LI81 207 aa9.18□□□□□ -0.94
PCF11-201ENST00000298281 LINC00322Q6ZN03 302 aaPredicted RBP9.18□□□□□ -0.94
PCF11-201ENST00000298281 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
PCF11-201ENST00000298281 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
PCF11-201ENST00000298281 IGLV2-8P01709 118 aa9.17□□□□□ -0.94
PCF11-201ENST00000298281 GRNP28799 593 aaKnown RBP9.17□□□□□ -0.94
PCF11-201ENST00000298281 ZNF524Q96C55 264 aa9.17□□□□□ -0.94
PCF11-201ENST00000298281 ALPK3Q96L96 1907 aa9.17□□□□□ -0.94
PCF11-201ENST00000298281 ZFAND2AQ8N6M9 145 aa9.17□□□□□ -0.94
PCF11-201ENST00000298281 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
PCF11-201ENST00000298281 NDUFA11Q86Y39 141 aa9.17□□□□□ -0.94
PCF11-201ENST00000298281 WFDC10AQ9H1F0 79 aa9.17□□□□□ -0.94
PCF11-201ENST00000298281 NDUFC1O43677 76 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 ZNF843Q8N446 348 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms