RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 IGHV1-18A0A0C4DH31 117 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV1-46P01743 117 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 CCKP06307 115 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 ZMAT4Q9H898 229 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 DKK1O94907 266 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 CD177Q8N6Q3 437 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 SAP25Q8TEE9 199 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1D-43A0A0B4J1Z2 117 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 LPAL2Q16609 132 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 H0Y9J4 135 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 FLNAP21333 2647 aaKnown RBP3.73□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV2D-26A0A0A0MRZ7 120 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 DEFB132Q7Z7B7 95 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 CENPFP49454 3210 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 RETNLBQ9BQ08 111 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 EBI3Q14213 229 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 LINC00308Q8TCZ7 52 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 SPRY2O43597 315 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 TMEM92Q6UXU6 159 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 Q6ZSR3 168 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
CSMD3-201ENST00000297405 LY6EQ16553 131 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 TMEM263Q8WUH6 116 aaKnown RBP3.73□□□□□ -1.81
CSMD3-201ENST00000297405 CAMK2N2Q96S95 79 aa3.73□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1D-17A0A075B6S4 117 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 MIR7-3HGQ8N6C7 128 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 ZNF71Q9NQZ8 489 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-201ENST00000297405 TEP1Q99973 2627 aaKnown RBP3.72□□□□□ -1.81
CSMD3-201ENST00000297405 UBR5O95071 2799 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-201ENST00000297405 BEAN1Q3B7T3 259 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 C5orf24Q7Z6I8 188 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 A0A0G2JRQ6 117 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 XCL1P47992 114 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1-6A0A0C4DH72 117 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 C15orf65H3BRN8 121 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 NPBQ8NG41 125 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 SPINK13Q1W4C9 94 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-73A0A0B4J1V6 119 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 C4orf51C9J302 202 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 DEFB112Q30KQ8 113 aa3.72□□□□□ -1.81
CSMD3-201ENST00000297405 MBD3L4A6NDZ8 208 aaPredicted RBP3.71□□□□□ -1.81
CSMD3-201ENST00000297405 MBD3L3A6NE82 208 aaPredicted RBP3.71□□□□□ -1.81
CSMD3-201ENST00000297405 MBD3L5A6NJ08 208 aaPredicted RBP3.71□□□□□ -1.81
CSMD3-201ENST00000297405 RPL35AP18077 110 aaKnown RBP3.71□□□□□ -1.81
CSMD3-201ENST00000297405 SAA4P35542 130 aa3.71□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 A0A087WW49 117 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 SEM1Q6ZVN7 128 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 TRBV7-6A0A0J9YX20 115 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 HCG22E2RYF7 251 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 EFNA2O43921 213 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 IGHV3-23P01764 117 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 SPAG11AQ6PDA7 123 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 FSTL3O95633 263 aa3.71□□□□□ -1.82
CSMD3-201ENST00000297405 ZNF22P17026 224 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-201ENST00000297405 CSRP1P21291 193 aaKnown RBP3.71□□□□□ -1.82
CSMD3-201ENST00000297405 IGHV3-11P01762 117 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 DIAPH2-AS1Q14236 149 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 GPHB5Q86YW7 130 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 NANOS2P60321 138 aaKnown RBP3.7□□□□□ -1.82
CSMD3-201ENST00000297405 KLK5Q9Y337 293 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-201ENST00000297405 MDS2Q8NDY4 140 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 ATP11AUNQ6ZP68 121 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 LINC01356Q8N9X3 169 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 RNF144BQ7Z419 303 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 HTN3P15516 51 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 LINC00208Q96KT6 92 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 A0A0J9YXV3 536 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 ZNF672Q499Z4 452 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-201ENST00000297405 MRPS12O15235 138 aaKnown RBP3.7□□□□□ -1.82
CSMD3-201ENST00000297405 RPL39LQ96EH5 51 aaKnown RBP3.7□□□□□ -1.82
CSMD3-201ENST00000297405 CTSGP08311 255 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 Q8N6K4 173 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 MBD6Q96DN6 1003 aa3.7□□□□□ -1.82
CSMD3-201ENST00000297405 DKK4Q9UBT3 224 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 PPDPFQ9H3Y8 114 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 IGLV11-55A0A075B6I3 123 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 IGKV1-17P01599 117 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 DEFB130BP0DP73 79 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 DEFB130AP0DP74 79 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 LINC00574Q9H8X3 128 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 IGHV4-4A0A075B6R2 117 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 NUPR1O60356 82 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 NDPQ00604 133 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 EPOPA6NHQ4 379 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 SHISA2Q6UWI4 295 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 IGHV3OR16-8A0A075B7F1 116 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 LHBP01229 141 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 SPAARA0A1B0GVQ0 90 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 OVOL3O00110 214 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 RFPL3SP0C7P2 107 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 RPL37AP8A6NKH3 93 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 SPART-AS1P0CW21 52 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 S4R3C0 116 aa3.69□□□□□ -1.82
CSMD3-201ENST00000297405 NTM-AS1Q6ZSK4 140 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 PRR19A6NJB7 356 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 DEFB131AP59861 70 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 C10orf55Q5SWW7 151 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms