RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 PRSS47A8MTI9 375 aa15.37■□□□□ 0.05
LINC01116-201ENST00000295549 FABP9Q0Z7S8 132 aa15.37■□□□□ 0.05
LINC01116-201ENST00000295549 KIAA1644Q3SXP7 199 aa15.37■□□□□ 0.05
LINC01116-201ENST00000295549 TRAPPC1Q9Y5R8 145 aa15.37■□□□□ 0.05
LINC01116-201ENST00000295549 TTC32Q5I0X7 151 aa15.36■□□□□ 0.05
LINC01116-201ENST00000295549 Q6ZR54 194 aa15.36■□□□□ 0.05
LINC01116-201ENST00000295549 NIT1Q86X76 327 aa15.36■□□□□ 0.05
LINC01116-201ENST00000295549 DEFB104AQ8WTQ1 72 aa15.36■□□□□ 0.05
LINC01116-201ENST00000295549 KIR2DL4Q99706 377 aa15.36■□□□□ 0.05
LINC01116-201ENST00000295549 SMIM2Q9BVW6 85 aa15.36■□□□□ 0.05
LINC01116-201ENST00000295549 TSHBP01222 138 aa15.35■□□□□ 0.05
LINC01116-201ENST00000295549 AMTP48728 403 aa15.35■□□□□ 0.05
LINC01116-201ENST00000295549 CHCHD5Q9BSY4 110 aa15.35■□□□□ 0.05
LINC01116-201ENST00000295549 TMEM243Q9BU79 118 aa15.35■□□□□ 0.05
LINC01116-201ENST00000295549 TRAV9-2A0A087WT02 112 aa15.34■□□□□ 0.05
LINC01116-201ENST00000295549 PKIAP61925 76 aa15.34■□□□□ 0.05
LINC01116-201ENST00000295549 CHCHD7Q9BUK0 85 aa15.34■□□□□ 0.05
LINC01116-201ENST00000295549 SCO1O75880 301 aa15.34■□□□□ 0.05
LINC01116-201ENST00000295549 ALKBH7Q9BT30 221 aaPredicted RBP15.34■□□□□ 0.05
LINC01116-201ENST00000295549 MAP1LC3AQ9H492 121 aa15.34■□□□□ 0.05
LINC01116-201ENST00000295549 COLCA2A8K830 154 aa15.33■□□□□ 0.04
LINC01116-201ENST00000295549 M0R2N4 97 aa15.33■□□□□ 0.04
LINC01116-201ENST00000295549 TCAPO15273 167 aa15.33■□□□□ 0.04
LINC01116-201ENST00000295549 TMEM262E9PQX1 116 aa15.32■□□□□ 0.04
LINC01116-201ENST00000295549 C10orf126Q8N4M7 172 aa15.32■□□□□ 0.04
LINC01116-201ENST00000295549 KRTAP1-5Q9BYS1 174 aa15.32■□□□□ 0.04
LINC01116-201ENST00000295549 RYR3Q15413 4870 aa15.31■□□□□ 0.04
LINC01116-201ENST00000295549 A0A087WX48 190 aa15.31■□□□□ 0.04
LINC01116-201ENST00000295549 ESDP10768 282 aa15.31■□□□□ 0.04
LINC01116-201ENST00000295549 FCER1GP30273 86 aa15.31■□□□□ 0.04
LINC01116-201ENST00000295549 H7C423 109 aa15.3■□□□□ 0.04
LINC01116-201ENST00000295549 IGHV3-30P01768 117 aa15.3■□□□□ 0.04
LINC01116-201ENST00000295549 IGHV3-33P01772 117 aa15.3■□□□□ 0.04
LINC01116-201ENST00000295549 IGHV3-30-3P0DP02 117 aa15.3■□□□□ 0.04
LINC01116-201ENST00000295549 IGHV3-30-5P0DP03 117 aa15.3■□□□□ 0.04
LINC01116-201ENST00000295549 Q8N3U1 123 aa15.3■□□□□ 0.04
LINC01116-201ENST00000295549 LOC389332A0A1B0GUA5 103 aa15.29■□□□□ 0.04
LINC01116-201ENST00000295549 GAGE6Q13070 117 aa15.29■□□□□ 0.04
LINC01116-201ENST00000295549 Q8N8P6 123 aa15.29■□□□□ 0.04
LINC01116-201ENST00000295549 UBE2L6O14933 153 aa15.28■□□□□ 0.04
LINC01116-201ENST00000295549 BTF3P20290 206 aaKnown RBP15.28■□□□□ 0.04
LINC01116-201ENST00000295549 MPV17L2Q567V2 206 aa15.28■□□□□ 0.04
LINC01116-201ENST00000295549 NXT2Q9NPJ8 142 aaKnown RBP15.28■□□□□ 0.04
LINC01116-201ENST00000295549 A0A1B0GUV1 79 aa15.27■□□□□ 0.04
LINC01116-201ENST00000295549 IBA57-AS1B1ANH7 110 aa15.26■□□□□ 0.03
LINC01116-201ENST00000295549 RAB5AP20339 215 aa15.26■□□□□ 0.03
LINC01116-201ENST00000295549 RBX1P62877 108 aa15.26■□□□□ 0.03
LINC01116-201ENST00000295549 DNAH2Q9P225 4427 aa15.26■□□□□ 0.03
LINC01116-201ENST00000295549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.26■□□□□ 0.03
LINC01116-201ENST00000295549 IGKV2-29A2NJV5 120 aaPredicted RBP15.26■□□□□ 0.03
LINC01116-201ENST00000295549 K7EMI3 77 aa15.26■□□□□ 0.03
LINC01116-201ENST00000295549 IFI27P40305 119 aaPredicted RBP15.26■□□□□ 0.03
LINC01116-201ENST00000295549 LAGE3Q14657 143 aa15.25■□□□□ 0.03
LINC01116-201ENST00000295549 Q8N976 141 aa15.25■□□□□ 0.03
LINC01116-201ENST00000295549 C20orf203Q8NBC4 194 aa15.24■□□□□ 0.03
LINC01116-201ENST00000295549 TRGC2P03986 189 aa15.23■□□□□ 0.03
LINC01116-201ENST00000295549 FGF6P10767 208 aa15.23■□□□□ 0.03
LINC01116-201ENST00000295549 C1orf134Q5TEV5 83 aa15.23■□□□□ 0.03
LINC01116-201ENST00000295549 PRSS3P2Q8NHM4 247 aa15.23■□□□□ 0.03
LINC01116-201ENST00000295549 ZNF25P17030 456 aaPredicted RBP15.22■□□□□ 0.03
LINC01116-201ENST00000295549 MRPL52Q86TS9 123 aaKnown RBP15.22■□□□□ 0.03
LINC01116-201ENST00000295549 C6orf223Q8N319 242 aa15.22■□□□□ 0.03
LINC01116-201ENST00000295549 TMEM18Q96B42 140 aa15.22■□□□□ 0.03
LINC01116-201ENST00000295549 KLK12Q9UKR0 248 aa15.22■□□□□ 0.03
LINC01116-201ENST00000295549 ORMDL2Q53FV1 153 aa15.21■□□□□ 0.03
LINC01116-201ENST00000295549 AMMECR1LQ6DCA0 310 aa15.21■□□□□ 0.03
LINC01116-201ENST00000295549 C18orf32Q8TCD1 76 aa15.21■□□□□ 0.03
LINC01116-201ENST00000295549 IGLV4-60A0A075B6I1 120 aa15.2■□□□□ 0.02
LINC01116-201ENST00000295549 LINC01546A6NGU7 62 aa15.2■□□□□ 0.02
LINC01116-201ENST00000295549 ANGP03950 147 aaKnown RBP15.2■□□□□ 0.02
LINC01116-201ENST00000295549 TRAV8-3A0A0A6YYJ7 113 aa15.19■□□□□ 0.02
LINC01116-201ENST00000295549 SMAGPQ0VAQ4 97 aa15.19■□□□□ 0.02
LINC01116-201ENST00000295549 RNASEKQ6P5S7 137 aaKnown RBP15.19■□□□□ 0.02
LINC01116-201ENST00000295549 NFE4Q86UQ8 179 aa15.18■□□□□ 0.02
LINC01116-201ENST00000295549 PRR34Q9NV39 138 aa15.18■□□□□ 0.02
LINC01116-201ENST00000295549 CSDC2Q9Y534 153 aaKnown RBP15.18■□□□□ 0.02
LINC01116-201ENST00000295549 TMEM101Q96IK0 257 aa15.17■□□□□ 0.02
LINC01116-201ENST00000295549 TIMM21Q9BVV7 248 aa15.17■□□□□ 0.02
LINC01116-201ENST00000295549 UBE2D4Q9Y2X8 147 aa15.17■□□□□ 0.02
LINC01116-201ENST00000295549 RPL39P62891 51 aaKnown RBP15.17■□□□□ 0.02
LINC01116-201ENST00000295549 Q0VG73 95 aa15.17■□□□□ 0.02
LINC01116-201ENST00000295549 LINC00269Q8N2A0 174 aa15.17■□□□□ 0.02
LINC01116-201ENST00000295549 UBE2WQ96B02 151 aa15.17■□□□□ 0.02
LINC01116-201ENST00000295549 G0S2P27469 103 aa15.16■□□□□ 0.02
LINC01116-201ENST00000295549 ENHOQ6UWT2 76 aa15.16■□□□□ 0.02
LINC01116-201ENST00000295549 FA2HQ7L5A8 372 aa15.16■□□□□ 0.02
LINC01116-201ENST00000295549 OR5A1Q8NGJ0 315 aa15.16■□□□□ 0.02
LINC01116-201ENST00000295549 DNAH10Q8IVF4 4471 aa15.16■□□□□ 0.02
LINC01116-201ENST00000295549 FRAS1Q86XX4 4008 aa15.15■□□□□ 0.02
LINC01116-201ENST00000295549 RTL8CO15255 209 aa15.15■□□□□ 0.02
LINC01116-201ENST00000295549 CRPP02741 224 aa15.15■□□□□ 0.02
LINC01116-201ENST00000295549 Q9HAA7 133 aa15.15■□□□□ 0.02
LINC01116-201ENST00000295549 LINC00614P0C842 121 aa15.14■□□□□ 0.01
LINC01116-201ENST00000295549 RAB5BP61020 215 aa15.14■□□□□ 0.01
LINC01116-201ENST00000295549 REG3AQ06141 175 aa15.14■□□□□ 0.01
LINC01116-201ENST00000295549 DGAT2L7PQ6IED9 249 aa15.14■□□□□ 0.01
LINC01116-201ENST00000295549 Q6ZRN7 208 aaPredicted RBP15.14■□□□□ 0.01
LINC01116-201ENST00000295549 CDC42SE2Q9NRR3 84 aa15.14■□□□□ 0.01
LINC01116-201ENST00000295549 SPANXA1Q9NS26 97 aa15.14■□□□□ 0.01
LINC01116-201ENST00000295549 AP5S1Q9NUS5 200 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms