RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 SPXQ9BT56 116 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 BEX4Q9NWD9 120 aaPredicted RBP12.33□□□□□ -0.44
CHRNE-201ENST00000293780 LYRM7Q5U5X0 104 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 VPREB3Q9UKI3 123 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
CHRNE-201ENST00000293780 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
CHRNE-201ENST00000293780 H7C2G1 150 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 ELANEP08246 267 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
CHRNE-201ENST00000293780 DSCR9P59020 149 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 Q6ZSN1 163 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 RNF152Q8N8N0 203 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 UBE2E2Q96LR5 201 aa12.32□□□□□ -0.44
CHRNE-201ENST00000293780 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
CHRNE-201ENST00000293780 NACAE9PAV3 2078 aa12.31□□□□□ -0.44
CHRNE-201ENST00000293780 CD28P10747 220 aa12.31□□□□□ -0.44
CHRNE-201ENST00000293780 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
CHRNE-201ENST00000293780 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
CHRNE-201ENST00000293780 LRRK2Q5S007 2527 aa12.3□□□□□ -0.44
CHRNE-201ENST00000293780 CUBNO60494 3623 aa12.3□□□□□ -0.44
CHRNE-201ENST00000293780 A8MWV9 139 aa12.3□□□□□ -0.44
CHRNE-201ENST00000293780 FAM208BQ5VWN6 2430 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
CHRNE-201ENST00000293780 IGHV3-33P01772 117 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 IGHV3-30-3P0DP02 117 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 Q6YL49 198 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 A0A0J9YXY3 114 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 H3BMM0 161 aa12.29□□□□□ -0.44
CHRNE-201ENST00000293780 ZNF469Q96JG9 3925 aaPredicted RBP12.28□□□□□ -0.44
CHRNE-201ENST00000293780 RNF183Q96D59 192 aa12.28□□□□□ -0.44
CHRNE-201ENST00000293780 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
CHRNE-201ENST00000293780 M0R2P5 195 aa12.28□□□□□ -0.44
CHRNE-201ENST00000293780 SBSPONQ8IVN8 264 aa12.28□□□□□ -0.44
CHRNE-201ENST00000293780 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
CHRNE-201ENST00000293780 ERG28Q9UKR5 140 aa12.28□□□□□ -0.44
CHRNE-201ENST00000293780 A8MZ25 164 aa12.27□□□□□ -0.45
CHRNE-201ENST00000293780 J3QLI3 93 aa12.27□□□□□ -0.45
CHRNE-201ENST00000293780 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.45
CHRNE-201ENST00000293780 TEX15Q9BXT5 2789 aa12.27□□□□□ -0.45
CHRNE-201ENST00000293780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
CHRNE-201ENST00000293780 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
CHRNE-201ENST00000293780 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
CHRNE-201ENST00000293780 TMEM61Q8N0U2 210 aa12.26□□□□□ -0.45
CHRNE-201ENST00000293780 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
CHRNE-201ENST00000293780 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
CHRNE-201ENST00000293780 EDA2RQ9HAV5 297 aa12.26□□□□□ -0.45
CHRNE-201ENST00000293780 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
CHRNE-201ENST00000293780 ADAMTSL4-AS1Q5T5F5 129 aa12.25□□□□□ -0.45
CHRNE-201ENST00000293780 LITAFQ99732 161 aa12.25□□□□□ -0.45
CHRNE-201ENST00000293780 A0A0B4J2C4 111 aa12.24□□□□□ -0.45
CHRNE-201ENST00000293780 FSHBP01225 129 aa12.24□□□□□ -0.45
CHRNE-201ENST00000293780 ANAPC13Q9BS18 74 aa12.24□□□□□ -0.45
CHRNE-201ENST00000293780 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
CHRNE-201ENST00000293780 A8MTW9 85 aa12.23□□□□□ -0.45
CHRNE-201ENST00000293780 C9JAW5 83 aa12.23□□□□□ -0.45
CHRNE-201ENST00000293780 IGHV4-31P0DP07 118 aa12.23□□□□□ -0.45
CHRNE-201ENST00000293780 LINC01587Q99440 93 aa12.23□□□□□ -0.45
CHRNE-201ENST00000293780 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
CHRNE-201ENST00000293780 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 PRSS2P07478 247 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 Q1RN00 199 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 ZFAND6Q6FIF0 208 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 PTPN13Q12923 2485 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 TMEM262E9PQX1 116 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 SLC25A20O43772 301 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 NPC2P61916 151 aa12.22□□□□□ -0.45
CHRNE-201ENST00000293780 PLA2G2AP14555 144 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 KHDC1LQ5JSQ8 128 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 TEX29Q8N6K0 151 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 TENM4Q6N022 2769 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 CR1P17927 2039 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.21□□□□□ -0.45
CHRNE-201ENST00000293780 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 NDUFA12Q9UI09 145 aa12.21□□□□□ -0.45
CHRNE-201ENST00000293780 KRTAP10-9P60411 292 aa12.2□□□□□ -0.46
CHRNE-201ENST00000293780 VSIG2Q96IQ7 327 aa12.2□□□□□ -0.46
CHRNE-201ENST00000293780 ABCA12Q86UK0 2595 aa12.2□□□□□ -0.46
CHRNE-201ENST00000293780 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
CHRNE-201ENST00000293780 Q6ZSV7 163 aa12.19□□□□□ -0.46
CHRNE-201ENST00000293780 J3QKU1 62 aa12.18□□□□□ -0.46
CHRNE-201ENST00000293780 TRIAP1O43715 76 aa12.18□□□□□ -0.46
CHRNE-201ENST00000293780 CITED1Q99966 193 aa12.18□□□□□ -0.46
CHRNE-201ENST00000293780 SPANXA1Q9NS26 97 aa12.18□□□□□ -0.46
CHRNE-201ENST00000293780 SS18L2Q9UHA2 77 aa12.18□□□□□ -0.46
CHRNE-201ENST00000293780 NBPF19A0A087WUL8 3843 aa12.18□□□□□ -0.46
CHRNE-201ENST00000293780 DYNLRB2Q8TF09 96 aa12.17□□□□□ -0.46
CHRNE-201ENST00000293780 PEMTQ9UBM1 199 aa12.17□□□□□ -0.46
CHRNE-201ENST00000293780 TLN2Q9Y4G6 2542 aa12.17□□□□□ -0.46
CHRNE-201ENST00000293780 IGHV3-53P01767 116 aa12.17□□□□□ -0.46
CHRNE-201ENST00000293780 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
CHRNE-201ENST00000293780 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 NAV2Q8IVL1 2488 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 GAGE5Q13069 117 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 GAGE6Q13070 117 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms