RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ZNF479Q96JC4 524 aa16.62■□□□□ 0.25
RAB40B-201ENST00000269347 TRGV1A0A0A0MS02 117 aa16.62■□□□□ 0.25
RAB40B-201ENST00000269347 IGHV3-38A0A0C4DH36 116 aa16.61■□□□□ 0.25
RAB40B-201ENST00000269347 FOSL1P15407 271 aa16.61■□□□□ 0.25
RAB40B-201ENST00000269347 C20orf203Q8NBC4 194 aa16.61■□□□□ 0.25
RAB40B-201ENST00000269347 FAM110AQ9BQ89 295 aa16.61■□□□□ 0.25
RAB40B-201ENST00000269347 C9orf118A6NHY6 69 aa16.61■□□□□ 0.25
RAB40B-201ENST00000269347 C11orf86A6NJI1 115 aa16.6■□□□□ 0.25
RAB40B-201ENST00000269347 IGHV3-53P01767 116 aa16.6■□□□□ 0.25
RAB40B-201ENST00000269347 GCSHP23434 173 aa16.6■□□□□ 0.25
RAB40B-201ENST00000269347 CEMP1Q6PRD7 247 aaPredicted RBP16.6■□□□□ 0.25
RAB40B-201ENST00000269347 CST9LQ9H4G1 147 aa16.6■□□□□ 0.25
RAB40B-201ENST00000269347 TIMM17AQ99595 171 aa16.6■□□□□ 0.25
RAB40B-201ENST00000269347 RHOHQ15669 191 aa16.59■□□□□ 0.25
RAB40B-201ENST00000269347 TMEM263Q8WUH6 116 aaKnown RBP16.59■□□□□ 0.25
RAB40B-201ENST00000269347 PHLDA1Q8WV24 401 aaPredicted RBP16.59■□□□□ 0.25
RAB40B-201ENST00000269347 NOP10Q9NPE3 64 aaKnown RBP16.59■□□□□ 0.25
RAB40B-201ENST00000269347 ZNRF2Q8NHG8 242 aa16.58■□□□□ 0.25
RAB40B-201ENST00000269347 RAB37Q96AX2 223 aa16.58■□□□□ 0.24
RAB40B-201ENST00000269347 LINC01549A6NIU2 74 aa16.57■□□□□ 0.24
RAB40B-201ENST00000269347 K7EP13 123 aa16.57■□□□□ 0.24
RAB40B-201ENST00000269347 H3BUT2 72 aa16.57■□□□□ 0.24
RAB40B-201ENST00000269347 PMVKQ15126 192 aa16.57■□□□□ 0.24
RAB40B-201ENST00000269347 TNFRSF18Q9Y5U5 241 aa16.57■□□□□ 0.24
RAB40B-201ENST00000269347 FXYD2P54710 66 aa16.56■□□□□ 0.24
RAB40B-201ENST00000269347 CHCHD7Q9BUK0 85 aa16.56■□□□□ 0.24
RAB40B-201ENST00000269347 CMC4P56277 68 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-201ENST00000269347 OR11H2Q8NH07 326 aa16.55■□□□□ 0.24
RAB40B-201ENST00000269347 TMEM141Q96I45 108 aa16.55■□□□□ 0.24
RAB40B-201ENST00000269347 IGLV4-3A0A075B6K6 122 aa16.54■□□□□ 0.24
RAB40B-201ENST00000269347 SMIM13P0DJ93 91 aa16.54■□□□□ 0.24
RAB40B-201ENST00000269347 NAA38Q9BRA0 125 aaKnown RBP16.54■□□□□ 0.24
RAB40B-201ENST00000269347 GAGE10A6NGK3 116 aa16.54■□□□□ 0.24
RAB40B-201ENST00000269347 RNASE13Q5GAN3 156 aaKnown RBP16.54■□□□□ 0.24
RAB40B-201ENST00000269347 CEND1Q8N111 149 aa16.54■□□□□ 0.24
RAB40B-201ENST00000269347 CITED1Q99966 193 aa16.54■□□□□ 0.24
RAB40B-201ENST00000269347 RHODO00212 210 aa16.53■□□□□ 0.24
RAB40B-201ENST00000269347 CMYA5Q8N3K9 4069 aa16.53■□□□□ 0.24
RAB40B-201ENST00000269347 FBN1P35555 2871 aaKnown RBP16.52■□□□□ 0.24
RAB40B-201ENST00000269347 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-201ENST00000269347 IGKV2-29A2NJV5 120 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-201ENST00000269347 TM2D2Q9BX73 214 aa16.52■□□□□ 0.24
RAB40B-201ENST00000269347 GTF2H5Q6ZYL4 71 aa16.51■□□□□ 0.23
RAB40B-201ENST00000269347 MYMXA0A1B0GTQ4 84 aa16.51■□□□□ 0.23
RAB40B-201ENST00000269347 TAL2Q16559 108 aa16.51■□□□□ 0.23
RAB40B-201ENST00000269347 PRADC1Q9BSG0 188 aa16.51■□□□□ 0.23
RAB40B-201ENST00000269347 GAGE12BA1L429 117 aa16.5■□□□□ 0.23
RAB40B-201ENST00000269347 E9PLD3 99 aa16.5■□□□□ 0.23
RAB40B-201ENST00000269347 GAGE7O76087 117 aa16.5■□□□□ 0.23
RAB40B-201ENST00000269347 GAGE12FP0CL80 117 aa16.5■□□□□ 0.23
RAB40B-201ENST00000269347 GAGE12GP0CL81 117 aa16.5■□□□□ 0.23
RAB40B-201ENST00000269347 GAGE12IP0CL82 117 aa16.5■□□□□ 0.23
RAB40B-201ENST00000269347 DAZ2Q13117 558 aaKnown RBP16.5■□□□□ 0.23
RAB40B-201ENST00000269347 TSPEAR-AS2P59090 65 aa16.49■□□□□ 0.23
RAB40B-201ENST00000269347 SLC25A29Q8N8R3 303 aa16.49■□□□□ 0.23
RAB40B-201ENST00000269347 NHP2Q9NX24 153 aaKnown RBP16.48■□□□□ 0.23
RAB40B-201ENST00000269347 A0A1W2PPM0 123 aa16.48■□□□□ 0.23
RAB40B-201ENST00000269347 PAPPA-AS1Q5QFB9 102 aa16.48■□□□□ 0.23
RAB40B-201ENST00000269347 C16orf74Q96GX8 76 aa16.48■□□□□ 0.23
RAB40B-201ENST00000269347 HIST1H4GQ99525 98 aa16.48■□□□□ 0.23
RAB40B-201ENST00000269347 LOC100131303A0A0U1RQF7 123 aa16.47■□□□□ 0.23
RAB40B-201ENST00000269347 K7EP34 96 aa16.47■□□□□ 0.23
RAB40B-201ENST00000269347 TRAV4A0A0B4J268 109 aa16.47■□□□□ 0.23
RAB40B-201ENST00000269347 A0A0J9YXV3 536 aa16.47■□□□□ 0.23
RAB40B-201ENST00000269347 K7ERJ3 54 aa16.47■□□□□ 0.23
RAB40B-201ENST00000269347 RRN3P1Q2M238 152 aa16.47■□□□□ 0.23
RAB40B-201ENST00000269347 PLEKHB2Q96CS7 222 aa16.46■□□□□ 0.23
RAB40B-201ENST00000269347 UBE2D4Q9Y2X8 147 aa16.46■□□□□ 0.23
RAB40B-201ENST00000269347 CYSRT1A8MQ03 144 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 SAMD5Q5TGI4 173 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 NTM-AS1Q6ZSK4 140 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 ANK2Q01484 3957 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 DNAJC30Q96LL9 226 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 OVOL2Q9BRP0 275 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 C1QTNF4Q9BXJ3 329 aa16.45■□□□□ 0.22
RAB40B-201ENST00000269347 K7EQD1 137 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 TMEM170BQ5T4T1 132 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 AMELXQ99217 191 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 FABP2P12104 132 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 HERVK_113P61574 105 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 C9orf66Q5T8R8 295 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 PYGO1Q9Y3Y4 419 aa16.44■□□□□ 0.22
RAB40B-201ENST00000269347 TRBV7-3A0A075B6L6 115 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 ZNF815PA8K554 130 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 LINC00694P0DN24 101 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 NFE4Q86UQ8 179 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 SPCS1Q9Y6A9 102 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 GAGE12JA6NER3 117 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 GAGE4Q13068 117 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 GAGE5Q13069 117 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 GAGE13Q4V321 117 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 Q6ZUT4 128 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 X6R8D5 127 aa16.43■□□□□ 0.22
RAB40B-201ENST00000269347 CBY1Q9Y3M2 126 aa16.42■□□□□ 0.22
RAB40B-201ENST00000269347 PKD1L1Q8TDX9 2849 aa16.42■□□□□ 0.22
RAB40B-201ENST00000269347 ZNF22P17026 224 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-201ENST00000269347 VCX2Q9H322 139 aa16.41■□□□□ 0.22
RAB40B-201ENST00000269347 STAB1Q9NY15 2570 aa16.41■□□□□ 0.22
RAB40B-201ENST00000269347 TRGV2A0A075B6R0 118 aa16.41■□□□□ 0.22
RAB40B-201ENST00000269347 COTL1Q14019 142 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms