RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PRSS33Q8NF86 280 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 WFDC10AQ9H1F0 79 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 NCR3O14931 201 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 WT1P19544 449 aaPredicted RBP4.17□□□□□ -1.74
XRN1-201ENST00000264951 TMEM223A0PJW6 202 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 TRIAP1O43715 76 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 DEFB112Q30KQ8 113 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 TRBV10-3A0A0K0K1G6 114 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 CELA1Q9UNI1 258 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 U3KQK5 164 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 HCFC1P51610 2035 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 C4orf3Q8WVX3 66 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 TNRC6BQ9UPQ9 1833 aaKnown RBP4.16□□□□□ -1.74
XRN1-201ENST00000264951 M0R378 163 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 Q0VFX4 171 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 Q8N976 141 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 PRORYQ9H606 182 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 hDV103S1A0JD37 113 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 C7orf33Q8WU49 177 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 RNF223E7ERA6 249 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 RPS28P62857 69 aaKnown RBP4.16□□□□□ -1.74
XRN1-201ENST00000264951 LINC00173Q6ZV60 143 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 CEP350Q5VT06 3117 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 LINC00205P59089 165 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 TRBV6-4A0A1B0GX49 114 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 NUPR1O60356 82 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 PRB2P02812 416 aaPredicted RBP4.16□□□□□ -1.74
XRN1-201ENST00000264951 REG3AQ06141 175 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 ESM1Q9NQ30 184 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 FAM30AQ9NZY2 134 aa4.16□□□□□ -1.74
XRN1-201ENST00000264951 UBE2D1P51668 147 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 RUSC1-AS1Q66K80 236 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 TPSG1Q9NRR2 321 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 KLK12Q9UKR0 248 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 ARHGAP21Q5T5U3 1957 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 IGHV4OR15-8A0A075B7B6 117 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 A0A087WW49 117 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 PATE2Q6UY27 113 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 LINC00574Q9H8X3 128 aa4.15□□□□□ -1.74
XRN1-201ENST00000264951 ZNF22P17026 224 aaPredicted RBP4.15□□□□□ -1.75
XRN1-201ENST00000264951 NLRC5Q86WI3 1866 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 RLFQ13129 1914 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 HELZP42694 1942 aaKnown RBP4.15□□□□□ -1.75
XRN1-201ENST00000264951 AJUBAQ96IF1 538 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 HIGD2AQ9BW72 106 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 ZSWIM8A7E2V4 1837 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 KRTAP27-1Q3LI81 207 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 CHCHD7Q9BUK0 85 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 MSRB1Q9NZV6 116 aa4.15□□□□□ -1.75
XRN1-201ENST00000264951 IGHV3-30P01768 117 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 IGHV3-30-5P0DP03 117 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 ZNF581Q9P0T4 197 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
XRN1-201ENST00000264951 Q8N9W7 124 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 SMAD5-AS1Q9Y6J3 95 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 PLXNB3Q9ULL4 1909 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 TNS1Q9HBL0 1735 aaKnown RBP4.14□□□□□ -1.75
XRN1-201ENST00000264951 CD164L2Q6UWJ8 174 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 CLUHP3Q96NS8 147 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 ZFYVE26Q68DK2 2539 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 PRYO14603 147 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 MBD6Q96DN6 1003 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 IGF2-ASQ6U949 168 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 RNF144BQ7Z419 303 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 WFDC10BQ8IUB3 73 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 C5orf56Q8N8D9 126 aa4.14□□□□□ -1.75
XRN1-201ENST00000264951 F8W735 103 aaPredicted RBP4.14□□□□□ -1.75
XRN1-201ENST00000264951 SP5Q6BEB4 398 aaPredicted RBP4.14□□□□□ -1.75
XRN1-201ENST00000264951 A0A096LPF7 62 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 MRPS12O15235 138 aaKnown RBP4.13□□□□□ -1.75
XRN1-201ENST00000264951 CHCHD10Q8WYQ3 142 aaPredicted RBP4.13□□□□□ -1.75
XRN1-201ENST00000264951 NTM-AS1Q6ZSK4 140 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 EML5Q05BV3 1969 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 SIP14410 1827 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 IGLV1-47P01700 117 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 PRB1P04280 392 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 RPL28P46779 137 aaKnown RBP4.13□□□□□ -1.75
XRN1-201ENST00000264951 EBI3Q14213 229 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 C6orf99Q4VX62 202 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 CDKN2A-AS1Q9UH64 79 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 PLXND1Q9Y4D7 1925 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 RSPO1Q2MKA7 263 aaPredicted RBP4.13□□□□□ -1.75
XRN1-201ENST00000264951 FAM19A1Q7Z5A9 133 aa4.13□□□□□ -1.75
XRN1-201ENST00000264951 ZNF73O43830 326 aaPredicted RBP4.12□□□□□ -1.75
XRN1-201ENST00000264951 P0C879 139 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
XRN1-201ENST00000264951 HRCT1Q6UXD1 115 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 Q96MF0 132 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 PLXNA2O75051 1894 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 CNFNQ9BYD5 112 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 HTTP42858 3142 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 TTTY13Q9BZ97 58 aa4.12□□□□□ -1.75
XRN1-201ENST00000264951 TRBV7-6A0A0J9YX20 115 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms