RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 G3V4G9 280 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 DCANP1Q8TF63 244 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 P0DMU3 169 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
PTPN4-201ENST00000263708 FAM215AQ9Y5M1 114 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 TRBV6-1A0A0K0K1D8 114 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 DEFB1P60022 68 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 CTSZQ9UBR2 303 aa8.73□□□□□ -1.01
PTPN4-201ENST00000263708 SLPIP03973 132 aa8.72□□□□□ -1.01
PTPN4-201ENST00000263708 V9GYY9 64 aa8.72□□□□□ -1.01
PTPN4-201ENST00000263708 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
PTPN4-201ENST00000263708 WT1P19544 449 aaPredicted RBP8.71□□□□□ -1.01
PTPN4-201ENST00000263708 LY6G6CO95867 125 aa8.71□□□□□ -1.01
PTPN4-201ENST00000263708 NDUFV3P56181 108 aaKnown RBP8.71□□□□□ -1.01
PTPN4-201ENST00000263708 SPRNQ5BIV9 151 aa8.71□□□□□ -1.01
PTPN4-201ENST00000263708 TECTAO75443 2155 aa8.71□□□□□ -1.02
PTPN4-201ENST00000263708 MIAQ16674 131 aa8.71□□□□□ -1.02
PTPN4-201ENST00000263708 CHCHD10Q8WYQ3 142 aaPredicted RBP8.71□□□□□ -1.02
PTPN4-201ENST00000263708 DNAJC9-AS1A6NH13 148 aa8.71□□□□□ -1.02
PTPN4-201ENST00000263708 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
PTPN4-201ENST00000263708 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
PTPN4-201ENST00000263708 I3L2K1 104 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 E9PLD3 99 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 INSL3P51460 131 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 PRAC2D3DTV9 90 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 Q8N9L7 120 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 SNURFQ9Y675 71 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 IGLV11-55A0A075B6I3 123 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 H3BT86 120 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 LOXL1Q08397 574 aaPredicted RBP8.7□□□□□ -1.02
PTPN4-201ENST00000263708 ZNF706Q9Y5V0 76 aaPredicted RBP8.7□□□□□ -1.02
PTPN4-201ENST00000263708 K7EIM0 57 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
PTPN4-201ENST00000263708 RAI1Q7Z5J4 1906 aaPredicted RBP8.69□□□□□ -1.02
PTPN4-201ENST00000263708 PTH2Q96A98 100 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 CUL9Q8IWT3 2517 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 PCNX3Q9H6A9 2034 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 WDR87Q6ZQQ6 2873 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 TCL1BO95988 128 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 FAM222AQ5U5X8 452 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 ODF3L1Q8IXM7 274 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 TRBV10-1A0A0K0K1A3 114 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 MAP6D1Q9H9H5 199 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 CCKP06307 115 aa8.68□□□□□ -1.02
PTPN4-201ENST00000263708 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 C10orf105Q8TEF2 133 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 SLX1AQ9BQ83 275 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 HIVEP2P31629 2446 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 FAM30AQ9NZY2 134 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 PROK2Q9HC23 129 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
PTPN4-201ENST00000263708 IGLC6P0CF74 106 aa8.66□□□□□ -1.02
PTPN4-201ENST00000263708 NOTCH2Q04721 2471 aa8.66□□□□□ -1.02
PTPN4-201ENST00000263708 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
PTPN4-201ENST00000263708 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
PTPN4-201ENST00000263708 LY6LH3BQJ8 138 aa8.65□□□□□ -1.03
PTPN4-201ENST00000263708 TP53TG3Q9ULZ0 132 aa8.65□□□□□ -1.03
PTPN4-201ENST00000263708 Q6ZTI0 123 aa8.65□□□□□ -1.03
PTPN4-201ENST00000263708 SPATA12Q7Z6I5 190 aa8.65□□□□□ -1.03
PTPN4-201ENST00000263708 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.03
PTPN4-201ENST00000263708 HIGD1BQ9P298 99 aa8.64□□□□□ -1.03
PTPN4-201ENST00000263708 TDRG1Q3Y452 100 aa8.64□□□□□ -1.03
PTPN4-201ENST00000263708 K7EMT4 169 aa8.64□□□□□ -1.03
PTPN4-201ENST00000263708 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
PTPN4-201ENST00000263708 C10orf91Q5T1B1 145 aa8.64□□□□□ -1.03
PTPN4-201ENST00000263708 ODF1Q14990 250 aa8.64□□□□□ -1.03
PTPN4-201ENST00000263708 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
PTPN4-201ENST00000263708 LYRM9A8MSI8 78 aa8.63□□□□□ -1.03
PTPN4-201ENST00000263708 THSD7BQ9C0I4 1608 aa8.63□□□□□ -1.03
PTPN4-201ENST00000263708 UQCRQO14949 82 aa8.63□□□□□ -1.03
PTPN4-201ENST00000263708 IGF2-ASQ6U949 168 aa8.63□□□□□ -1.03
PTPN4-201ENST00000263708 CIRBP-AS1Q8TBR5 109 aa8.63□□□□□ -1.03
PTPN4-201ENST00000263708 ACACBO00763 2458 aa8.62□□□□□ -1.03
PTPN4-201ENST00000263708 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
PTPN4-201ENST00000263708 PLA2G1BP04054 148 aaKnown RBP8.62□□□□□ -1.03
PTPN4-201ENST00000263708 A0A0J9YXY3 114 aa8.62□□□□□ -1.03
PTPN4-201ENST00000263708 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
PTPN4-201ENST00000263708 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
PTPN4-201ENST00000263708 CTRLP40313 264 aa8.62□□□□□ -1.03
PTPN4-201ENST00000263708 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
PTPN4-201ENST00000263708 U3KQA8 63 aa8.62□□□□□ -1.03
PTPN4-201ENST00000263708 ATP5EP2Q5VTU8 51 aa8.61□□□□□ -1.03
PTPN4-201ENST00000263708 A0A0J9YX75 114 aa8.61□□□□□ -1.03
PTPN4-201ENST00000263708 TRBV27A0A0K0K1C4 114 aa8.61□□□□□ -1.03
PTPN4-201ENST00000263708 INAFM1C9JVW0 142 aa8.61□□□□□ -1.03
PTPN4-201ENST00000263708 FAM19A3Q7Z5A8 133 aa8.61□□□□□ -1.03
PTPN4-201ENST00000263708 TIMM17BO60830 172 aa8.6□□□□□ -1.03
PTPN4-201ENST00000263708 C20orf203Q8NBC4 194 aa8.6□□□□□ -1.03
PTPN4-201ENST00000263708 C11orf53Q8IXP5 236 aa8.6□□□□□ -1.03
PTPN4-201ENST00000263708 ADORA2A-AS1P86434 159 aa8.6□□□□□ -1.03
PTPN4-201ENST00000263708 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 ESRGQ1W209 222 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 POM121L12Q8N7R1 296 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 NUPR1O60356 82 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms