RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
CYSTM1-201ENST00000261811 PSCAO43653 123 aa12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 SUMO2P61956 95 aaKnown RBP12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 RMI2Q96E14 147 aa12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 KIR2DL4Q99706 377 aa12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 TM2D2Q9BX73 214 aa12.65□□□□□ -0.38
CYSTM1-201ENST00000261811 D6R8Y8 96 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 PHOX2AO14813 284 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 TCAPO15273 167 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 Q0VG73 95 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 GAGE6Q13070 117 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 COX19Q49B96 90 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 ATRAIDQ6UW56 229 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 ORMDL3Q8N138 153 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 Q9HAA7 133 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 KLK12Q9UKR0 248 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 COX11Q9Y6N1 276 aa12.64□□□□□ -0.39
CYSTM1-201ENST00000261811 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 TRBV27A0A0K0K1C4 114 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 H7C423 109 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 EREGO14944 169 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 CRPP02741 224 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 ANGP03950 147 aaKnown RBP12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 FCER1GP30273 86 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 POLR2KP53803 58 aaKnown RBP12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 MPV17L2Q567V2 206 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 NRACQ8N912 160 aa12.63□□□□□ -0.39
CYSTM1-201ENST00000261811 TNFRSF6BO95407 300 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 A0A1B0GUV1 79 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 SMAGPQ0VAQ4 97 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 AMMECR1LQ6DCA0 310 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 Q8N3U1 123 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 DEFB104AQ8WTQ1 72 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 LAMTOR2Q9Y2Q5 125 aa12.62□□□□□ -0.39
CYSTM1-201ENST00000261811 HLA-DQA1P01909 254 aa12.61□□□□□ -0.39
CYSTM1-201ENST00000261811 RBX1P62877 108 aa12.61□□□□□ -0.39
CYSTM1-201ENST00000261811 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
CYSTM1-201ENST00000261811 TNP2Q05952 138 aa12.61□□□□□ -0.39
CYSTM1-201ENST00000261811 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
CYSTM1-201ENST00000261811 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
CYSTM1-201ENST00000261811 Q8N976 141 aa12.6□□□□□ -0.39
CYSTM1-201ENST00000261811 BIRC6Q9NR09 4857 aa12.59□□□□□ -0.39
CYSTM1-201ENST00000261811 TSHBP01222 138 aa12.59□□□□□ -0.39
CYSTM1-201ENST00000261811 TMEM18Q96B42 140 aa12.59□□□□□ -0.39
CYSTM1-201ENST00000261811 GNB1LQ9BYB4 327 aa12.59□□□□□ -0.39
CYSTM1-201ENST00000261811 MT-ND6P03923 174 aa12.58□□□□□ -0.4
CYSTM1-201ENST00000261811 MIAQ16674 131 aa12.58□□□□□ -0.4
CYSTM1-201ENST00000261811 SLC7A5P1Q8MH63 180 aa12.58□□□□□ -0.4
CYSTM1-201ENST00000261811 TMEM101Q96IK0 257 aa12.58□□□□□ -0.4
CYSTM1-201ENST00000261811 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
CYSTM1-201ENST00000261811 NPYP01303 97 aa12.57□□□□□ -0.4
CYSTM1-201ENST00000261811 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
CYSTM1-201ENST00000261811 RNASEKQ6P5S7 137 aaKnown RBP12.57□□□□□ -0.4
CYSTM1-201ENST00000261811 C1orf43Q9BWL3 253 aa12.57□□□□□ -0.4
CYSTM1-201ENST00000261811 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
CYSTM1-201ENST00000261811 IGKV2D-24A0A075B6R9 120 aa12.56□□□□□ -0.4
CYSTM1-201ENST00000261811 RAB5AP20339 215 aa12.56□□□□□ -0.4
CYSTM1-201ENST00000261811 LINC00269Q8N2A0 174 aa12.56□□□□□ -0.4
CYSTM1-201ENST00000261811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
CYSTM1-201ENST00000261811 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
CYSTM1-201ENST00000261811 FGF6P10767 208 aa12.55□□□□□ -0.4
CYSTM1-201ENST00000261811 ESDP10768 282 aa12.55□□□□□ -0.4
CYSTM1-201ENST00000261811 REG3AQ06141 175 aa12.54□□□□□ -0.4
CYSTM1-201ENST00000261811 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
CYSTM1-201ENST00000261811 PRR34Q9NV39 138 aa12.54□□□□□ -0.4
CYSTM1-201ENST00000261811 TRAV8-4A0A0B4J246 113 aa12.53□□□□□ -0.4
CYSTM1-201ENST00000261811 A0A1B0GVY2 172 aa12.53□□□□□ -0.4
CYSTM1-201ENST00000261811 PRSS47A8MTI9 375 aa12.53□□□□□ -0.4
CYSTM1-201ENST00000261811 ENHOQ6UWT2 76 aa12.53□□□□□ -0.4
CYSTM1-201ENST00000261811 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
CYSTM1-201ENST00000261811 OR5A1Q8NGJ0 315 aa12.53□□□□□ -0.4
CYSTM1-201ENST00000261811 IGLV4-60A0A075B6I1 120 aa12.52□□□□□ -0.41
CYSTM1-201ENST00000261811 FRAS1Q86XX4 4008 aa12.51□□□□□ -0.41
CYSTM1-201ENST00000261811 A0A087WTM6 91 aa12.51□□□□□ -0.41
CYSTM1-201ENST00000261811 LOC389332A0A1B0GUA5 103 aa12.51□□□□□ -0.41
CYSTM1-201ENST00000261811 CLPSL2Q6UWE3 100 aa12.51□□□□□ -0.41
CYSTM1-201ENST00000261811 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
CYSTM1-201ENST00000261811 K7EMI3 77 aa12.5□□□□□ -0.41
CYSTM1-201ENST00000261811 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
CYSTM1-201ENST00000261811 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
CYSTM1-201ENST00000261811 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
CYSTM1-201ENST00000261811 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
CYSTM1-201ENST00000261811 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
CYSTM1-201ENST00000261811 Q8N8P6 123 aa12.49□□□□□ -0.41
CYSTM1-201ENST00000261811 SMCO4Q9NRQ5 59 aa12.49□□□□□ -0.41
CYSTM1-201ENST00000261811 G0S2P27469 103 aa12.48□□□□□ -0.41
CYSTM1-201ENST00000261811 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
CYSTM1-201ENST00000261811 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
CYSTM1-201ENST00000261811 CSDC2Q9Y534 153 aaKnown RBP12.48□□□□□ -0.41
CYSTM1-201ENST00000261811 TRAPPC1Q9Y5R8 145 aa12.48□□□□□ -0.41
CYSTM1-201ENST00000261811 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
CYSTM1-201ENST00000261811 TIMM21Q9BVV7 248 aa12.47□□□□□ -0.41
CYSTM1-201ENST00000261811 DNAH10Q8IVF4 4471 aa12.47□□□□□ -0.41
CYSTM1-201ENST00000261811 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.41
CYSTM1-201ENST00000261811 CDPF1Q6NVV7 123 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms