RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 STHQ8IWL8 128 aa11.22□□□□□ -0.61
KCTD3-201ENST00000259154 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.61
KCTD3-201ENST00000259154 LGALS9O00182 355 aa11.21□□□□□ -0.61
KCTD3-201ENST00000259154 LAMTOR3Q9UHA4 124 aa11.21□□□□□ -0.61
KCTD3-201ENST00000259154 OOSP1A8MZH6 123 aa11.21□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV3-33P01772 117 aa11.21□□□□□ -0.62
KCTD3-201ENST00000259154 RHODO00212 210 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 HAMPP81172 84 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 F8P00451 2351 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 ATP5G1P05496 136 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
KCTD3-201ENST00000259154 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 RBMY1BA6NDE4 496 aaKnown RBP11.2□□□□□ -0.62
KCTD3-201ENST00000259154 RBMY1EA6NEQ0 496 aaKnown RBP11.2□□□□□ -0.62
KCTD3-201ENST00000259154 RBMY1DP0C7P1 496 aaKnown RBP11.2□□□□□ -0.62
KCTD3-201ENST00000259154 RBMY1A1P0DJD3 496 aaKnown RBP11.2□□□□□ -0.62
KCTD3-201ENST00000259154 RBMY1CP0DJD4 496 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
KCTD3-201ENST00000259154 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 A0A1B0GX51 115 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 DEFB130BP0DP73 79 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 DEFB130AP0DP74 79 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
KCTD3-201ENST00000259154 RHOHQ15669 191 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
KCTD3-201ENST00000259154 TMEM126AQ9H061 195 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 CRYGBP07316 175 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 NRGNQ92686 78 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 NPBQ8NG41 125 aa11.18□□□□□ -0.62
KCTD3-201ENST00000259154 NDUFA4O00483 81 aa11.17□□□□□ -0.62
KCTD3-201ENST00000259154 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
KCTD3-201ENST00000259154 FAM223BA6NKX1 122 aa11.17□□□□□ -0.62
KCTD3-201ENST00000259154 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
KCTD3-201ENST00000259154 FAM223AQ8IWN6 122 aa11.17□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
KCTD3-201ENST00000259154 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV3-30P01768 117 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV3-30-5P0DP03 117 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV4-38-2P0DP08 117 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 TRACP01848 142 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 PRB2P02812 416 aaPredicted RBP11.16□□□□□ -0.62
KCTD3-201ENST00000259154 B4DSR2 109 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 SMCPP49901 116 aaPredicted RBP11.16□□□□□ -0.62
KCTD3-201ENST00000259154 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
KCTD3-201ENST00000259154 KLK5Q9Y337 293 aaPredicted RBP11.16□□□□□ -0.62
KCTD3-201ENST00000259154 S100A7L2Q5SY68 101 aa11.15□□□□□ -0.62
KCTD3-201ENST00000259154 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
KCTD3-201ENST00000259154 FASNP49327 2511 aaKnown RBP11.15□□□□□ -0.62
KCTD3-201ENST00000259154 C14orf132Q9NPU4 83 aa11.15□□□□□ -0.62
KCTD3-201ENST00000259154 FLNCQ14315 2725 aa11.15□□□□□ -0.62
KCTD3-201ENST00000259154 IGHV4-61A0A0C4DH41 118 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 IGHG4P01861 327 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 EDN2P20800 178 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 C20orf203Q8NBC4 194 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
KCTD3-201ENST00000259154 CDKN2A-AS1Q9UH64 79 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 MUC4Q99102 2169 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 CLPSL1A2RUU4 121 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 IGHV1-69P01742 117 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 MSMBP08118 114 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
KCTD3-201ENST00000259154 hADV29S1A0JD25 119 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 SOCS3O14543 225 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
KCTD3-201ENST00000259154 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 MALP21145 153 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 ZANQ9Y493 2812 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 TMEM86BQ8N661 226 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 TMEM190Q8WZ59 177 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 TIMM17AQ99595 171 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
KCTD3-201ENST00000259154 SLPIP03973 132 aa11.12□□□□□ -0.63
KCTD3-201ENST00000259154 CFAP161Q6P656 301 aa11.12□□□□□ -0.63
KCTD3-201ENST00000259154 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
KCTD3-201ENST00000259154 IGHV4-59P01825 116 aa11.12□□□□□ -0.63
KCTD3-201ENST00000259154 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
KCTD3-201ENST00000259154 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
KCTD3-201ENST00000259154 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
KCTD3-201ENST00000259154 U3KQE9 123 aa11.12□□□□□ -0.63
KCTD3-201ENST00000259154 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
KCTD3-201ENST00000259154 LECT2O14960 151 aa11.11□□□□□ -0.63
KCTD3-201ENST00000259154 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
KCTD3-201ENST00000259154 C19orf84I3L1E1 186 aa11.1□□□□□ -0.63
KCTD3-201ENST00000259154 XCL1P47992 114 aa11.1□□□□□ -0.63
KCTD3-201ENST00000259154 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms