RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SCO1O75880 301 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 TSHBP01222 138 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 ALKBH7Q9BT30 221 aaPredicted RBP9.62□□□□□ -0.87
VPS25-201ENST00000253794 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 PMCHP20382 165 aa9.61□□□□□ -0.87
VPS25-201ENST00000253794 PKIAP61925 76 aa9.61□□□□□ -0.87
VPS25-201ENST00000253794 FABP9Q0Z7S8 132 aa9.61□□□□□ -0.87
VPS25-201ENST00000253794 KIAA1644Q3SXP7 199 aa9.61□□□□□ -0.87
VPS25-201ENST00000253794 ESDP10768 282 aa9.6□□□□□ -0.87
VPS25-201ENST00000253794 NIT1Q86X76 327 aa9.6□□□□□ -0.87
VPS25-201ENST00000253794 KIR2DL4Q99706 377 aa9.6□□□□□ -0.87
VPS25-201ENST00000253794 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
VPS25-201ENST00000253794 HYDINQ4G0P3 5121 aa9.6□□□□□ -0.87
VPS25-201ENST00000253794 H7C423 109 aa9.59□□□□□ -0.87
VPS25-201ENST00000253794 K7EMI3 77 aa9.59□□□□□ -0.87
VPS25-201ENST00000253794 RAB5AP20339 215 aa9.59□□□□□ -0.87
VPS25-201ENST00000253794 Q6ZR54 194 aa9.59□□□□□ -0.87
VPS25-201ENST00000253794 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
VPS25-201ENST00000253794 DNAH2Q9P225 4427 aa9.58□□□□□ -0.88
VPS25-201ENST00000253794 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
VPS25-201ENST00000253794 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
VPS25-201ENST00000253794 AMTP48728 403 aa9.58□□□□□ -0.88
VPS25-201ENST00000253794 TTC32Q5I0X7 151 aa9.58□□□□□ -0.88
VPS25-201ENST00000253794 Q8N8P6 123 aa9.58□□□□□ -0.88
VPS25-201ENST00000253794 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
VPS25-201ENST00000253794 LINC01546A6NGU7 62 aa9.57□□□□□ -0.88
VPS25-201ENST00000253794 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
VPS25-201ENST00000253794 RYR3Q15413 4870 aa9.57□□□□□ -0.88
VPS25-201ENST00000253794 A0A1B0GUV1 79 aa9.56□□□□□ -0.88
VPS25-201ENST00000253794 FCER1GP30273 86 aa9.56□□□□□ -0.88
VPS25-201ENST00000253794 C10orf126Q8N4M7 172 aa9.56□□□□□ -0.88
VPS25-201ENST00000253794 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
VPS25-201ENST00000253794 TRAV9-2A0A087WT02 112 aa9.55□□□□□ -0.88
VPS25-201ENST00000253794 MRPL52Q86TS9 123 aaKnown RBP9.55□□□□□ -0.88
VPS25-201ENST00000253794 C18orf32Q8TCD1 76 aa9.55□□□□□ -0.88
VPS25-201ENST00000253794 A0A087WX48 190 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 LOC389332A0A1B0GUA5 103 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 TRGC2P03986 189 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
VPS25-201ENST00000253794 LAGE3Q14657 143 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 Q8N3U1 123 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
VPS25-201ENST00000253794 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
VPS25-201ENST00000253794 UBE2L6O14933 153 aa9.53□□□□□ -0.88
VPS25-201ENST00000253794 ZNF25P17030 456 aaPredicted RBP9.53□□□□□ -0.88
VPS25-201ENST00000253794 RBX1P62877 108 aa9.53□□□□□ -0.88
VPS25-201ENST00000253794 GAGE6Q13070 117 aa9.53□□□□□ -0.88
VPS25-201ENST00000253794 ORMDL2Q53FV1 153 aa9.53□□□□□ -0.88
VPS25-201ENST00000253794 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
VPS25-201ENST00000253794 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
VPS25-201ENST00000253794 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
VPS25-201ENST00000253794 TMEM18Q96B42 140 aa9.52□□□□□ -0.89
VPS25-201ENST00000253794 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
VPS25-201ENST00000253794 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
VPS25-201ENST00000253794 FRAS1Q86XX4 4008 aa9.52□□□□□ -0.89
VPS25-201ENST00000253794 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 IGHV3-30P01768 117 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 IGHV3-33P01772 117 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 IGHV3-30-5P0DP03 117 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 FGF6P10767 208 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 URB1-AS1Q96HZ7 61 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
VPS25-201ENST00000253794 Q0VG73 95 aa9.5□□□□□ -0.89
VPS25-201ENST00000253794 Q8N976 141 aa9.5□□□□□ -0.89
VPS25-201ENST00000253794 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
VPS25-201ENST00000253794 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
VPS25-201ENST00000253794 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
VPS25-201ENST00000253794 M0R2N4 97 aa9.49□□□□□ -0.89
VPS25-201ENST00000253794 G0S2P27469 103 aa9.49□□□□□ -0.89
VPS25-201ENST00000253794 RAB5BP61020 215 aa9.49□□□□□ -0.89
VPS25-201ENST00000253794 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
VPS25-201ENST00000253794 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
VPS25-201ENST00000253794 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 NPSP0C0P6 89 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 LINC00614P0C842 121 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 RPL39P62891 51 aaKnown RBP9.48□□□□□ -0.89
VPS25-201ENST00000253794 AMMECR1LQ6DCA0 310 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 FA2HQ7L5A8 372 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 AP5S1Q9NUS5 200 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 KLK12Q9UKR0 248 aa9.48□□□□□ -0.89
VPS25-201ENST00000253794 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
VPS25-201ENST00000253794 MRPS36P82909 103 aaKnown RBP9.47□□□□□ -0.89
VPS25-201ENST00000253794 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 Q6ZRN7 208 aaPredicted RBP9.47□□□□□ -0.89
VPS25-201ENST00000253794 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 FAM104AQ969W3 186 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 CHCHD1Q96BP2 118 aaKnown RBP9.47□□□□□ -0.89
VPS25-201ENST00000253794 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
VPS25-201ENST00000253794 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms