RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 IGLV2-18A0A075B6J9 118 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 IGHV1-24A0A0C4DH33 117 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 TMEM262E9PQX1 116 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 KIR2DL4Q99706 377 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 TMEM243Q9BU79 118 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 SMIM2Q9BVW6 85 aa6.93□□□□□ -1.3
HMGCL-201ENST00000235958 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 TCAPO15273 167 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 FCER1GP30273 86 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
HMGCL-201ENST00000235958 AMTP48728 403 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 NIT1Q86X76 327 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 Q8N8P6 123 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 PRSS3P2Q8NHM4 247 aa6.92□□□□□ -1.3
HMGCL-201ENST00000235958 M0R2N4 97 aa6.91□□□□□ -1.3
HMGCL-201ENST00000235958 DNAH10OSP0CZ25 163 aa6.91□□□□□ -1.3
HMGCL-201ENST00000235958 ESDP10768 282 aa6.91□□□□□ -1.3
HMGCL-201ENST00000235958 GAGE6Q13070 117 aa6.91□□□□□ -1.3
HMGCL-201ENST00000235958 Q8N3U1 123 aa6.91□□□□□ -1.3
HMGCL-201ENST00000235958 CHCHD7Q9BUK0 85 aa6.91□□□□□ -1.3
HMGCL-201ENST00000235958 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
HMGCL-201ENST00000235958 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 A0A087WX48 190 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 LINC01556Q5JQF7 62 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.3
HMGCL-201ENST00000235958 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.89□□□□□ -1.31
HMGCL-201ENST00000235958 NBDYA0A0U1RRE5 68 aa6.89□□□□□ -1.31
HMGCL-201ENST00000235958 IGKV2-29A2NJV5 120 aaPredicted RBP6.89□□□□□ -1.31
HMGCL-201ENST00000235958 UBE2L6O14933 153 aa6.89□□□□□ -1.31
HMGCL-201ENST00000235958 RBX1P62877 108 aa6.89□□□□□ -1.31
HMGCL-201ENST00000235958 LAGE3Q14657 143 aa6.89□□□□□ -1.31
HMGCL-201ENST00000235958 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 RYR3Q15413 4870 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 H7C423 109 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 K7EMI3 77 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 K7EP13 123 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 LINC00614P0C842 121 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 PKIAP61925 76 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 Q6ZR54 194 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 Q8N976 141 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 LYSTQ99698 3801 aa6.88□□□□□ -1.31
HMGCL-201ENST00000235958 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 IBA57-AS1B1ANH7 110 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 FGF6P10767 208 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
HMGCL-201ENST00000235958 ORMDL2Q53FV1 153 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 AMMECR1LQ6DCA0 310 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 FA2HQ7L5A8 372 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 KLK12Q9UKR0 248 aa6.87□□□□□ -1.31
HMGCL-201ENST00000235958 ANGP03950 147 aaKnown RBP6.86□□□□□ -1.31
HMGCL-201ENST00000235958 RAB5BP61020 215 aa6.86□□□□□ -1.31
HMGCL-201ENST00000235958 Q0VG73 95 aa6.86□□□□□ -1.31
HMGCL-201ENST00000235958 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
HMGCL-201ENST00000235958 RNASEKQ6P5S7 137 aaKnown RBP6.86□□□□□ -1.31
HMGCL-201ENST00000235958 C10orf126Q8N4M7 172 aa6.86□□□□□ -1.31
HMGCL-201ENST00000235958 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
HMGCL-201ENST00000235958 G0S2P27469 103 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 DGAT2L7PQ6IED9 249 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 MRPL52Q86TS9 123 aaKnown RBP6.85□□□□□ -1.31
HMGCL-201ENST00000235958 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 UBE2D4Q9Y2X8 147 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
HMGCL-201ENST00000235958 KMT2AQ03164 3969 aa6.85□□□□□ -1.31
HMGCL-201ENST00000235958 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
HMGCL-201ENST00000235958 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
HMGCL-201ENST00000235958 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 C2orf66Q6UXQ4 117 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 OR5A1Q8NGJ0 315 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 UBE2WQ96B02 151 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 TMEM101Q96IK0 257 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
HMGCL-201ENST00000235958 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms