RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
LAMA4-201ENST00000230538 IGHV4-31P0DP07 118 aa8.69□□□□□ -1.02
LAMA4-201ENST00000230538 H7C423 109 aa8.69□□□□□ -1.02
LAMA4-201ENST00000230538 LRRC75A-AS1Q8N1F1 130 aa8.69□□□□□ -1.02
LAMA4-201ENST00000230538 SMIM9A6NGZ8 99 aa8.69□□□□□ -1.02
LAMA4-201ENST00000230538 RIF1Q5UIP0 2472 aaKnown RBP8.69□□□□□ -1.02
LAMA4-201ENST00000230538 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 LINC00574Q9H8X3 128 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 IGF1P05019 195 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 BRK1Q8WUW1 75 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 C19orf84I3L1E1 186 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 K7EQG2 157 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 ZNF295-AS1Q8N0V1 137 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 GPR179Q6PRD1 2367 aa8.68□□□□□ -1.02
LAMA4-201ENST00000230538 HILS1P60008 231 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 PCNX1Q96RV3 2341 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 LTBP2Q14767 1821 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 TMEM223A0PJW6 202 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 CRIP3Q6Q6R5 217 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 PRORYQ9H606 182 aa8.67□□□□□ -1.02
LAMA4-201ENST00000230538 NOTCH3Q9UM47 2321 aa8.66□□□□□ -1.02
LAMA4-201ENST00000230538 A0A096LNI7 61 aa8.66□□□□□ -1.02
LAMA4-201ENST00000230538 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
LAMA4-201ENST00000230538 A0A087WZ39 114 aa8.66□□□□□ -1.02
LAMA4-201ENST00000230538 LRCOL1A6NCL2 159 aa8.66□□□□□ -1.02
LAMA4-201ENST00000230538 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
LAMA4-201ENST00000230538 EIF4EBP1Q13541 118 aaPredicted RBP8.65□□□□□ -1.02
LAMA4-201ENST00000230538 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.02
LAMA4-201ENST00000230538 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
LAMA4-201ENST00000230538 KIR2DL5BQ8NHK3 375 aa8.65□□□□□ -1.02
LAMA4-201ENST00000230538 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.03
LAMA4-201ENST00000230538 SLPIP03973 132 aa8.65□□□□□ -1.03
LAMA4-201ENST00000230538 ARHGAP21Q5T5U3 1957 aa8.65□□□□□ -1.03
LAMA4-201ENST00000230538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.65□□□□□ -1.03
LAMA4-201ENST00000230538 CFAP126Q5VTH2 177 aa8.64□□□□□ -1.03
LAMA4-201ENST00000230538 MLST8Q9BVC4 326 aa8.64□□□□□ -1.03
LAMA4-201ENST00000230538 ZNF22P17026 224 aaPredicted RBP8.64□□□□□ -1.03
LAMA4-201ENST00000230538 SCXQ7RTU7 201 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
LAMA4-201ENST00000230538 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 COL4A4P53420 1690 aaPredicted RBP8.63□□□□□ -1.03
LAMA4-201ENST00000230538 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 INAFM1C9JVW0 142 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 PIK3CD-AS1Q5SR53 167 aa8.63□□□□□ -1.03
LAMA4-201ENST00000230538 SHANK1Q9Y566 2161 aa8.62□□□□□ -1.03
LAMA4-201ENST00000230538 CRIP1P50238 77 aa8.62□□□□□ -1.03
LAMA4-201ENST00000230538 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
LAMA4-201ENST00000230538 C22orf34Q6ZV56 151 aa8.62□□□□□ -1.03
LAMA4-201ENST00000230538 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
LAMA4-201ENST00000230538 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
LAMA4-201ENST00000230538 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
LAMA4-201ENST00000230538 M0QY20 66 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 MIFP14174 115 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 NDUFV3P56181 108 aaKnown RBP8.61□□□□□ -1.03
LAMA4-201ENST00000230538 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 PROK1P58294 105 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 MAPKAPK5-AS1Q8N8E1 139 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 MPLKIPQ8TAP9 179 aa8.61□□□□□ -1.03
LAMA4-201ENST00000230538 NBASA2RRP1 2371 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 LY6LH3BQJ8 138 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 SPTSSBQ8NFR3 76 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 MBD6Q96DN6 1003 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 XAGE1AQ9HD64 81 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 CACNA1HO95180 2353 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.6□□□□□ -1.03
LAMA4-201ENST00000230538 TRBV6-4A0A1B0GX49 114 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 WFDC10BQ8IUB3 73 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 FSTL3O95633 263 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 TRIAP1O43715 76 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 Q6ZSV7 163 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
LAMA4-201ENST00000230538 ATP5EP2Q5VTU8 51 aa8.59□□□□□ -1.03
LAMA4-201ENST00000230538 U3KQK5 164 aa8.59□□□□□ -1.03
LAMA4-201ENST00000230538 EBI3Q14213 229 aa8.59□□□□□ -1.03
LAMA4-201ENST00000230538 ALPK3Q96L96 1907 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 PCNX2A6NKB5 2137 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 C10orf99Q6UWK7 81 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 UQCRQO14949 82 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
LAMA4-201ENST00000230538 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
LAMA4-201ENST00000230538 BBC3Q96PG8 261 aaPredicted RBP8.57□□□□□ -1.04
LAMA4-201ENST00000230538 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 Q8N976 141 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 SHISA2Q6UWI4 295 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
LAMA4-201ENST00000230538 C7orf33Q8WU49 177 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms