RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 C9JAW5 83 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 RPL32P62910 135 aaKnown RBP11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 GAGE4Q13068 117 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 GAGE5Q13069 117 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 TMEM101Q96IK0 257 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 CCL24O00175 119 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 NXPH4O95158 308 aa11.04□□□□□ -0.64
UBE2D4-201ENST00000222402 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 TRGV4A0A0C4DH28 118 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 PF4P02776 101 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 LINC00315P59091 139 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 TSHBP01222 138 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 IGSF10Q6WRI0 2623 aa11.03□□□□□ -0.64
UBE2D4-201ENST00000222402 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.64
UBE2D4-201ENST00000222402 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.64
UBE2D4-201ENST00000222402 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
UBE2D4-201ENST00000222402 C10orf126Q8N4M7 172 aa11.02□□□□□ -0.65
UBE2D4-201ENST00000222402 IGLV4-69A0A075B6H9 119 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 GAGE12HA6NDE8 117 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 TSPAN13O95857 204 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 GAGE7O76087 117 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 DEFB114Q30KQ6 69 aa11.01□□□□□ -0.65
UBE2D4-201ENST00000222402 CSMD1Q96PZ7 3565 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 CFAP46Q8IYW2 2715 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 CFC1BP0CG36 223 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 CFC1P0CG37 223 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 IGHV3-30-3P0DP02 117 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 SLC25A29Q8N8R3 303 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
UBE2D4-201ENST00000222402 SPANXA1Q9NS26 97 aa11□□□□□ -0.65
UBE2D4-201ENST00000222402 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
UBE2D4-201ENST00000222402 PTH2Q96A98 100 aa10.99□□□□□ -0.65
UBE2D4-201ENST00000222402 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
UBE2D4-201ENST00000222402 RPL13AP40429 203 aaKnown RBP10.99□□□□□ -0.65
UBE2D4-201ENST00000222402 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
UBE2D4-201ENST00000222402 TMEM262E9PQX1 116 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 TSPEAR-AS2P59090 65 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 Q6ZUT4 128 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 Q6ZSV7 163 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 TMEM223A0PJW6 202 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 DNAJC9-AS1A6NH13 148 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 HIST2H2BCQ6DN03 193 aa10.98□□□□□ -0.65
UBE2D4-201ENST00000222402 RNF152Q8N8N0 203 aa10.97□□□□□ -0.65
UBE2D4-201ENST00000222402 BBC3Q96PG8 261 aaPredicted RBP10.97□□□□□ -0.65
UBE2D4-201ENST00000222402 CITED2Q99967 270 aaPredicted RBP10.97□□□□□ -0.65
UBE2D4-201ENST00000222402 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
UBE2D4-201ENST00000222402 CFAP126Q5VTH2 177 aa10.97□□□□□ -0.65
UBE2D4-201ENST00000222402 SPANXB1Q9NS25 103 aaPredicted RBP10.97□□□□□ -0.65
UBE2D4-201ENST00000222402 DAND5Q8N907 189 aa10.96□□□□□ -0.65
UBE2D4-201ENST00000222402 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.65
UBE2D4-201ENST00000222402 SLC25A20O43772 301 aa10.96□□□□□ -0.66
UBE2D4-201ENST00000222402 DEFB130BP0DP73 79 aa10.96□□□□□ -0.66
UBE2D4-201ENST00000222402 DEFB130AP0DP74 79 aa10.96□□□□□ -0.66
UBE2D4-201ENST00000222402 PPDPFLQ8WWR9 84 aa10.96□□□□□ -0.66
UBE2D4-201ENST00000222402 MORN3Q6PF18 240 aaPredicted RBP10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 NFE4Q86UQ8 179 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 TCL1BO95988 128 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
UBE2D4-201ENST00000222402 A8MZ25 164 aa10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 RBMY1A1P0DJD3 496 aaKnown RBP10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 RBMY1CP0DJD4 496 aa10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 C1QTNF4Q9BXJ3 329 aa10.94□□□□□ -0.66
UBE2D4-201ENST00000222402 Q6ZTI0 123 aa10.93□□□□□ -0.66
UBE2D4-201ENST00000222402 Q9H8V8 135 aa10.93□□□□□ -0.66
UBE2D4-201ENST00000222402 C2orf82Q6UX34 121 aa10.93□□□□□ -0.66
UBE2D4-201ENST00000222402 LRRC75A-AS1Q8N1F1 130 aa10.93□□□□□ -0.66
UBE2D4-201ENST00000222402 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 HERVK_113P63121 156 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 FOXI1Q12951 378 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 GAGE6Q13070 117 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 CDKN2A-AS1Q9UH64 79 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 A0A1B0GV72 72 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 UBE2D1P51668 147 aa10.92□□□□□ -0.66
UBE2D4-201ENST00000222402 K7EQD1 137 aa10.91□□□□□ -0.66
UBE2D4-201ENST00000222402 INSL3P51460 131 aa10.91□□□□□ -0.66
UBE2D4-201ENST00000222402 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
UBE2D4-201ENST00000222402 ZANQ9Y493 2812 aa10.91□□□□□ -0.66
UBE2D4-201ENST00000222402 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
UBE2D4-201ENST00000222402 TEN1Q86WV5 123 aa10.91□□□□□ -0.66
UBE2D4-201ENST00000222402 PYGO1Q9Y3Y4 419 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms