RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 TSHBP01222 138 aa11.56□□□□□ -0.56
POLR2E-201ENST00000215587 LINC00310P59036 64 aa11.56□□□□□ -0.56
POLR2E-201ENST00000215587 LAGE3Q14657 143 aa11.56□□□□□ -0.56
POLR2E-201ENST00000215587 KRTAP17-1Q9BYP8 105 aa11.56□□□□□ -0.56
POLR2E-201ENST00000215587 TMEM97Q5BJF2 176 aa11.55□□□□□ -0.56
POLR2E-201ENST00000215587 C15orf53Q8NAA6 179 aa11.55□□□□□ -0.56
POLR2E-201ENST00000215587 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
POLR2E-201ENST00000215587 A0A096LPF7 62 aa11.54□□□□□ -0.56
POLR2E-201ENST00000215587 NUDT3O95989 172 aa11.54□□□□□ -0.56
POLR2E-201ENST00000215587 ESDP10768 282 aa11.54□□□□□ -0.56
POLR2E-201ENST00000215587 SNRPEP62304 92 aaKnown RBP11.54□□□□□ -0.56
POLR2E-201ENST00000215587 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
POLR2E-201ENST00000215587 NUPR1O60356 82 aa11.53□□□□□ -0.56
POLR2E-201ENST00000215587 G0S2P27469 103 aa11.53□□□□□ -0.56
POLR2E-201ENST00000215587 AMTP48728 403 aa11.53□□□□□ -0.56
POLR2E-201ENST00000215587 GTSF1LQ9H1H1 148 aa11.53□□□□□ -0.56
POLR2E-201ENST00000215587 SACSQ9NZJ4 4579 aa11.52□□□□□ -0.57
POLR2E-201ENST00000215587 NUPR2A6NF83 97 aa11.52□□□□□ -0.57
POLR2E-201ENST00000215587 C5orf52A6NGY3 159 aa11.52□□□□□ -0.57
POLR2E-201ENST00000215587 S100A2P29034 98 aa11.52□□□□□ -0.57
POLR2E-201ENST00000215587 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
POLR2E-201ENST00000215587 TENM2Q9NT68 2774 aa11.52□□□□□ -0.57
POLR2E-201ENST00000215587 STAB2Q8WWQ8 2551 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 IGLL5B9A064 214 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 HBDP02042 147 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 BTF3P20290 206 aaKnown RBP11.51□□□□□ -0.57
POLR2E-201ENST00000215587 PMCHL1Q16048 86 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
POLR2E-201ENST00000215587 HIST3H2BBQ8N257 126 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
POLR2E-201ENST00000215587 TRBV25-1A0A075B6N4 114 aa11.5□□□□□ -0.57
POLR2E-201ENST00000215587 TMEM18Q96B42 140 aa11.5□□□□□ -0.57
POLR2E-201ENST00000215587 TMEM243Q9BU79 118 aa11.5□□□□□ -0.57
POLR2E-201ENST00000215587 CYSLTR1Q9Y271 337 aa11.5□□□□□ -0.57
POLR2E-201ENST00000215587 DNAH1Q9P2D7 4330 aa11.49□□□□□ -0.57
POLR2E-201ENST00000215587 TRBV6-8A0A0A6YYG3 113 aa11.49□□□□□ -0.57
POLR2E-201ENST00000215587 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
POLR2E-201ENST00000215587 NTM-AS1Q6ZSK4 140 aa11.49□□□□□ -0.57
POLR2E-201ENST00000215587 KLK5Q9Y337 293 aaPredicted RBP11.49□□□□□ -0.57
POLR2E-201ENST00000215587 C2orf66Q6UXQ4 117 aa11.48□□□□□ -0.57
POLR2E-201ENST00000215587 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
POLR2E-201ENST00000215587 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
POLR2E-201ENST00000215587 TIRAPP58753 221 aa11.47□□□□□ -0.57
POLR2E-201ENST00000215587 TOMM6Q96B49 74 aa11.47□□□□□ -0.57
POLR2E-201ENST00000215587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
POLR2E-201ENST00000215587 A0A096LNJ9 63 aa11.46□□□□□ -0.57
POLR2E-201ENST00000215587 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
POLR2E-201ENST00000215587 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
POLR2E-201ENST00000215587 UBE2L6O14933 153 aa11.46□□□□□ -0.57
POLR2E-201ENST00000215587 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
POLR2E-201ENST00000215587 LELP1Q5T871 98 aa11.46□□□□□ -0.57
POLR2E-201ENST00000215587 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
POLR2E-201ENST00000215587 CHCHD5Q9BSY4 110 aa11.46□□□□□ -0.57
POLR2E-201ENST00000215587 LEPROTL1O95214 131 aa11.45□□□□□ -0.58
POLR2E-201ENST00000215587 FABP4P15090 132 aa11.45□□□□□ -0.58
POLR2E-201ENST00000215587 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
POLR2E-201ENST00000215587 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
POLR2E-201ENST00000215587 SCGB3A1Q96QR1 104 aa11.45□□□□□ -0.58
POLR2E-201ENST00000215587 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
POLR2E-201ENST00000215587 HSPB8Q9UJY1 196 aa11.45□□□□□ -0.58
POLR2E-201ENST00000215587 H7C423 109 aa11.44□□□□□ -0.58
POLR2E-201ENST00000215587 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
POLR2E-201ENST00000215587 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
POLR2E-201ENST00000215587 ATP5LO75964 103 aa11.43□□□□□ -0.58
POLR2E-201ENST00000215587 TCTAP57738 103 aa11.43□□□□□ -0.58
POLR2E-201ENST00000215587 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
POLR2E-201ENST00000215587 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
POLR2E-201ENST00000215587 PKIAP61925 76 aa11.42□□□□□ -0.58
POLR2E-201ENST00000215587 GAGE6Q13070 117 aa11.42□□□□□ -0.58
POLR2E-201ENST00000215587 ESRGQ1W209 222 aa11.42□□□□□ -0.58
POLR2E-201ENST00000215587 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
POLR2E-201ENST00000215587 ERASQ7Z444 233 aa11.42□□□□□ -0.58
POLR2E-201ENST00000215587 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
POLR2E-201ENST00000215587 IFITM10A6NMD0 228 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.41□□□□□ -0.58
POLR2E-201ENST00000215587 FGF6P10767 208 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 CCL18P55774 89 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 MRPL52Q86TS9 123 aaKnown RBP11.41□□□□□ -0.58
POLR2E-201ENST00000215587 TMEM141Q96I45 108 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 TIMM17AQ99595 171 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 APLNQ9ULZ1 77 aa11.41□□□□□ -0.58
POLR2E-201ENST00000215587 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
POLR2E-201ENST00000215587 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
POLR2E-201ENST00000215587 IFI27L1Q96BM0 104 aa11.4□□□□□ -0.58
POLR2E-201ENST00000215587 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
POLR2E-201ENST00000215587 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
POLR2E-201ENST00000215587 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
POLR2E-201ENST00000215587 DNAH7Q8WXX0 4024 aa11.4□□□□□ -0.58
POLR2E-201ENST00000215587 TMEM262E9PQX1 116 aa11.39□□□□□ -0.59
POLR2E-201ENST00000215587 PAPPA-AS1Q5QFB9 102 aa11.39□□□□□ -0.59
POLR2E-201ENST00000215587 Q6ZN92 141 aa11.39□□□□□ -0.59
POLR2E-201ENST00000215587 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
POLR2E-201ENST00000215587 MAP1LC3CQ9BXW4 147 aa11.39□□□□□ -0.59
POLR2E-201ENST00000215587 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
POLR2E-201ENST00000215587 NPSP0C0P6 89 aa11.38□□□□□ -0.59
POLR2E-201ENST00000215587 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
POLR2E-201ENST00000215587 A0A087WX48 190 aa11.37□□□□□ -0.59
POLR2E-201ENST00000215587 KRTDAPP60985 99 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms