RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 NPC2P61916 151 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RHOHQ15669 191 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 GDF5OSQ5U4N7 250 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SLC48A1Q6P1K1 146 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LYPD5Q6UWN5 251 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C3orf62Q6ZUJ4 267 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C5orf17Q8NAS9 161 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SMIM7Q9BQ49 75 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SSC5DA1L4H1 1573 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PRDM15P57071 1507 aaPredicted RBP0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SPTBP11277 2137 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NCOR1O75376 2440 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 COL6A5A8TX70 2615 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ABCA1O95477 2261 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MYO3AQ8NEV4 1616 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IGLV3-32A0A0A0MS00 114 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TMEM30CPA0ZSE6 113 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MCRIP1C9JLW8 97 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 H3BRM9 83 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 K7EIL1 84 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IGKCP01834 107 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 GYPBP06028 91 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PIRTP0C851 137 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 HIST1H1DP16402 221 aaKnown RBP0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 UBE2D1P51668 147 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 WHAMMP3Q1A5X7 153 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FAM74A1Q5RGS3 127 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C12orf73Q69YU5 71 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C10orf99Q6UWK7 81 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IDO2Q6ZQW0 420 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 GKN2Q86XP6 184 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C5orf56Q8N8D9 126 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C10orf82Q8WW14 230 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 DSCR8Q96T75 97 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NAA60Q9H7X0 242 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CDK13Q14004 1512 aaKnown RBP0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MED14O60244 1454 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TEX14Q8IWB6 1497 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KIF21AQ7Z4S6 1674 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ABCC5O15440 1437 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MEGF8Q7Z7M0 2845 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LAMC1P11047 1609 aa0.46□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PIEZO1Q92508 2521 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ZNF236Q9UL36 1845 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 F5P12259 2224 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KNTC1P50748 2209 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 RGPD4Q7Z3J3 1758 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ARHGEF12Q9NZN5 1544 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MYO18BQ8IUG5 2567 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 A0A096LNT2 108 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 OOSP1A8MZH6 123 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 GEMIN2O14893 280 aaKnown RBP0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LYNX1P0DP58 116 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IL9P15248 144 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 RBP2P50120 134 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 INSL4Q14641 139 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FXYD3Q14802 87 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 Q56UQ5 140 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C9orf116Q5BN46 136 aaPredicted RBP0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SPANXN1Q5VSR9 72 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 XAF1Q6GPH4 301 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TMEM141Q96I45 108 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PDCD10Q9BUL8 212 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FYCO1Q9BQS8 1478 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TMEM131LA2VDJ0 1609 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CACNA1CQ13936 2221 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 POLQO75417 2590 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NAV3Q8IVL0 2385 aa0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KTN1Q86UP2 1357 aaKnown RBP0.45□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ABCC3O15438 1527 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 HMGXB3Q12766 1538 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 EHBP1L1Q8N3D4 1523 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LOC107984156A0A0G2JMH3 177 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TEX49A0A1B0GTD5 131 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NDUFB6O95139 128 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 AKAIN1P0CW23 69 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CCL3L1P16619 93 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 POLR2JP52435 117 aaKnown RBP0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PPP3R1P63098 170 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CATR1Q13166 79 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ARL17AQ8IVW1 177 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KCNRGQ8N5I3 272 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IFI27L1Q96BM0 104 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PPP3R2Q96LZ3 170 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TCEAL7Q9BRU2 100 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SEC11CQ9BY50 192 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TMEM242Q9NWH2 141 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MRPL36Q9P0J6 103 aaKnown RBP0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NHSL1Q5SYE7 1610 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NSD3Q9BZ95 1437 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 RGPD3A6NKT7 1758 aaPredicted RBP0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KDM3BQ7LBC6 1761 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CEP350Q5VT06 3117 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 DOCK11Q5JSL3 2073 aa0.44□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ABCA12Q86UK0 2595 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms