RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
SMN1-211ENST00000625245 DAZAP1Q96EP5 407 aaKnown RBP12.23□□□□□ -0.45
SMN1-211ENST00000625245 NTM-AS1Q6ZSK4 140 aa12.22□□□□□ -0.45
SMN1-211ENST00000625245 LINC00269Q8N2A0 174 aa12.22□□□□□ -0.45
SMN1-211ENST00000625245 C9orf163Q8N9P6 203 aa12.22□□□□□ -0.45
SMN1-211ENST00000625245 RBX1P62877 108 aa12.21□□□□□ -0.45
SMN1-211ENST00000625245 TMEM97Q5BJF2 176 aa12.21□□□□□ -0.45
SMN1-211ENST00000625245 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
SMN1-211ENST00000625245 DERL1Q9BUN8 251 aa12.21□□□□□ -0.45
SMN1-211ENST00000625245 CYTL1Q9NRR1 136 aa12.21□□□□□ -0.45
SMN1-211ENST00000625245 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.21□□□□□ -0.45
SMN1-211ENST00000625245 A0A1B0GV50 99 aa12.2□□□□□ -0.46
SMN1-211ENST00000625245 ARPC5O15511 151 aa12.2□□□□□ -0.46
SMN1-211ENST00000625245 S100A9P06702 114 aaKnown RBP12.2□□□□□ -0.46
SMN1-211ENST00000625245 CXCL1P09341 107 aa12.2□□□□□ -0.46
SMN1-211ENST00000625245 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
SMN1-211ENST00000625245 SCO2A0A1W2PP80 73 aa12.19□□□□□ -0.46
SMN1-211ENST00000625245 SNAI2O43623 268 aa12.19□□□□□ -0.46
SMN1-211ENST00000625245 SFT2D1Q8WV19 159 aa12.19□□□□□ -0.46
SMN1-211ENST00000625245 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
SMN1-211ENST00000625245 PRR34Q9NV39 138 aa12.19□□□□□ -0.46
SMN1-211ENST00000625245 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
SMN1-211ENST00000625245 PANO1I0J062 215 aa12.18□□□□□ -0.46
SMN1-211ENST00000625245 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
SMN1-211ENST00000625245 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
SMN1-211ENST00000625245 UBR4Q5T4S7 5183 aa12.18□□□□□ -0.46
SMN1-211ENST00000625245 IGLV10-54A0A075B6I4 117 aa12.17□□□□□ -0.46
SMN1-211ENST00000625245 PFDN1O60925 122 aa12.17□□□□□ -0.46
SMN1-211ENST00000625245 KRTAP26-1Q6PEX3 210 aa12.17□□□□□ -0.46
SMN1-211ENST00000625245 FAM213BQ8TBF2 198 aa12.17□□□□□ -0.46
SMN1-211ENST00000625245 MLST8Q9BVC4 326 aa12.17□□□□□ -0.46
SMN1-211ENST00000625245 G3V3Q6 166 aa12.16□□□□□ -0.46
SMN1-211ENST00000625245 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
SMN1-211ENST00000625245 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
SMN1-211ENST00000625245 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
SMN1-211ENST00000625245 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
SMN1-211ENST00000625245 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
SMN1-211ENST00000625245 MGPP08493 103 aa12.15□□□□□ -0.46
SMN1-211ENST00000625245 REG3AQ06141 175 aa12.15□□□□□ -0.46
SMN1-211ENST00000625245 CLRN3Q8NCR9 226 aa12.15□□□□□ -0.46
SMN1-211ENST00000625245 KIF25-AS1Q9Y6Z4 181 aa12.15□□□□□ -0.46
SMN1-211ENST00000625245 A0A0D9SG52 128 aa12.14□□□□□ -0.47
SMN1-211ENST00000625245 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
SMN1-211ENST00000625245 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
SMN1-211ENST00000625245 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
SMN1-211ENST00000625245 TPPP3Q9BW30 176 aa12.14□□□□□ -0.47
SMN1-211ENST00000625245 RAB5CP51148 216 aa12.13□□□□□ -0.47
SMN1-211ENST00000625245 KCNRGQ8N5I3 272 aa12.13□□□□□ -0.47
SMN1-211ENST00000625245 SMLR1H3BR10 107 aa12.12□□□□□ -0.47
SMN1-211ENST00000625245 GZMBP10144 247 aa12.12□□□□□ -0.47
SMN1-211ENST00000625245 AP5S1Q9NUS5 200 aa12.12□□□□□ -0.47
SMN1-211ENST00000625245 M0QY20 66 aa12.11□□□□□ -0.47
SMN1-211ENST00000625245 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 UMAD1C9J7I0 102 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 H7C1H1 209 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 P01737 135 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 RPL35P42766 123 aaKnown RBP12.1□□□□□ -0.47
SMN1-211ENST00000625245 NKX2-5P52952 324 aaPredicted RBP12.1□□□□□ -0.47
SMN1-211ENST00000625245 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
SMN1-211ENST00000625245 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 TMEM243Q9BU79 118 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 BATF3Q9NR55 127 aa12.1□□□□□ -0.47
SMN1-211ENST00000625245 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
SMN1-211ENST00000625245 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
SMN1-211ENST00000625245 H2AFB1P0C5Y9 115 aa12.09□□□□□ -0.47
SMN1-211ENST00000625245 CHTF8P0CG12 524 aa12.09□□□□□ -0.47
SMN1-211ENST00000625245 MT1HL1P0DM35 61 aa12.09□□□□□ -0.47
SMN1-211ENST00000625245 Q6ZRU5 148 aa12.09□□□□□ -0.47
SMN1-211ENST00000625245 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
SMN1-211ENST00000625245 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
SMN1-211ENST00000625245 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
SMN1-211ENST00000625245 A0A087WYN8 130 aa12.07□□□□□ -0.48
SMN1-211ENST00000625245 SLPIP03973 132 aa12.07□□□□□ -0.48
SMN1-211ENST00000625245 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
SMN1-211ENST00000625245 OR2D3Q8NGH3 330 aa12.07□□□□□ -0.48
SMN1-211ENST00000625245 A0A1B0GUV1 79 aa12.06□□□□□ -0.48
SMN1-211ENST00000625245 IGLC6P0CF74 106 aa12.06□□□□□ -0.48
SMN1-211ENST00000625245 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
SMN1-211ENST00000625245 CACNG7P62955 275 aa12.06□□□□□ -0.48
SMN1-211ENST00000625245 RASL11AQ6T310 242 aa12.06□□□□□ -0.48
SMN1-211ENST00000625245 UBE2L6O14933 153 aa12.05□□□□□ -0.48
SMN1-211ENST00000625245 ZNF345Q14585 488 aa12.05□□□□□ -0.48
SMN1-211ENST00000625245 CENPWQ5EE01 88 aa12.05□□□□□ -0.48
SMN1-211ENST00000625245 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
SMN1-211ENST00000625245 GNG13Q9P2W3 67 aa12.05□□□□□ -0.48
SMN1-211ENST00000625245 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
SMN1-211ENST00000625245 SULT1A2P50226 295 aa12.04□□□□□ -0.48
SMN1-211ENST00000625245 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
SMN1-211ENST00000625245 CCL20P78556 96 aa12.03□□□□□ -0.48
SMN1-211ENST00000625245 SPACA4Q8TDM5 124 aa12.03□□□□□ -0.48
SMN1-211ENST00000625245 DPH3P1Q9H4G8 78 aa12.03□□□□□ -0.48
SMN1-211ENST00000625245 NIT2Q9NQR4 276 aa12.03□□□□□ -0.48
SMN1-211ENST00000625245 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 GAGE12HA6NDE8 117 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 BCL2L11O43521 198 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 TRGC1P0CF51 173 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 AMTP48728 403 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 RGS21Q2M5E4 152 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms