RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 MED9Q9NWA0 146 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 KIF25-AS1Q9Y6Z4 181 aa13.56□□□□□ -0.24
SMC6-210ENST00000621152 PDE6DO43924 150 aa13.55□□□□□ -0.24
SMC6-210ENST00000621152 IFNA1P01562 189 aa13.55□□□□□ -0.24
SMC6-210ENST00000621152 INAFM2P0DMQ5 153 aa13.55□□□□□ -0.24
SMC6-210ENST00000621152 RPS20P60866 119 aaKnown RBP13.55□□□□□ -0.24
SMC6-210ENST00000621152 Q5VSD8 79 aa13.55□□□□□ -0.24
SMC6-210ENST00000621152 FAM30AQ9NZY2 134 aa13.55□□□□□ -0.24
SMC6-210ENST00000621152 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.54□□□□□ -0.24
SMC6-210ENST00000621152 C1QBP02746 253 aa13.54□□□□□ -0.24
SMC6-210ENST00000621152 FER1L6-AS1Q8NA97 138 aa13.54□□□□□ -0.24
SMC6-210ENST00000621152 C19orf71A6NCJ1 209 aa13.53□□□□□ -0.24
SMC6-210ENST00000621152 IGLC6P0CF74 106 aa13.53□□□□□ -0.24
SMC6-210ENST00000621152 AP1S3Q96PC3 154 aa13.53□□□□□ -0.24
SMC6-210ENST00000621152 BCL2P10415 239 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 Q0VG73 95 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 Q6ZNX1 250 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 Q8N976 141 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 SMIM12Q96EX1 92 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 VAX2Q9UIW0 290 aa13.52□□□□□ -0.25
SMC6-210ENST00000621152 FAM229AH3BQW9 127 aa13.51□□□□□ -0.25
SMC6-210ENST00000621152 P01737 135 aa13.51□□□□□ -0.25
SMC6-210ENST00000621152 CACNG7P62955 275 aa13.51□□□□□ -0.25
SMC6-210ENST00000621152 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
SMC6-210ENST00000621152 BIN3Q9NQY0 253 aa13.51□□□□□ -0.25
SMC6-210ENST00000621152 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
SMC6-210ENST00000621152 F2Z2F3 143 aa13.5□□□□□ -0.25
SMC6-210ENST00000621152 MGPP08493 103 aa13.5□□□□□ -0.25
SMC6-210ENST00000621152 TMEM97Q5BJF2 176 aa13.5□□□□□ -0.25
SMC6-210ENST00000621152 NTM-AS1Q6ZSK4 140 aa13.5□□□□□ -0.25
SMC6-210ENST00000621152 TRBV20OR9-2A0A075B6H5 130 aa13.49□□□□□ -0.25
SMC6-210ENST00000621152 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
SMC6-210ENST00000621152 ATRAIDQ6UW56 229 aa13.49□□□□□ -0.25
SMC6-210ENST00000621152 ENHOQ6UWT2 76 aa13.49□□□□□ -0.25
SMC6-210ENST00000621152 M0QY20 66 aa13.48□□□□□ -0.25
SMC6-210ENST00000621152 ANGP03950 147 aaKnown RBP13.48□□□□□ -0.25
SMC6-210ENST00000621152 TAGLN2P37802 199 aaKnown RBP13.48□□□□□ -0.25
SMC6-210ENST00000621152 LYZL1Q6UWQ5 148 aa13.48□□□□□ -0.25
SMC6-210ENST00000621152 NUDT10Q8NFP7 164 aa13.48□□□□□ -0.25
SMC6-210ENST00000621152 NUDT11Q96G61 164 aa13.48□□□□□ -0.25
SMC6-210ENST00000621152 C1orf43Q9BWL3 253 aa13.48□□□□□ -0.25
SMC6-210ENST00000621152 CRPP02741 224 aa13.47□□□□□ -0.25
SMC6-210ENST00000621152 PKIAP61925 76 aa13.47□□□□□ -0.25
SMC6-210ENST00000621152 LINC01620Q4KN68 170 aa13.47□□□□□ -0.25
SMC6-210ENST00000621152 H7C1H1 209 aa13.46□□□□□ -0.25
SMC6-210ENST00000621152 NTF3P20783 257 aa13.46□□□□□ -0.25
SMC6-210ENST00000621152 GAGE6Q13070 117 aa13.46□□□□□ -0.25
SMC6-210ENST00000621152 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
SMC6-210ENST00000621152 AKAP14Q86UN6 197 aa13.45□□□□□ -0.26
SMC6-210ENST00000621152 C9orf62Q8N4C0 152 aa13.45□□□□□ -0.26
SMC6-210ENST00000621152 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
SMC6-210ENST00000621152 hCG_2014768A0A024R1R8 64 aa13.44□□□□□ -0.26
SMC6-210ENST00000621152 TRBV25-1A0A075B6N4 114 aa13.44□□□□□ -0.26
SMC6-210ENST00000621152 TRGC1P0CF51 173 aa13.44□□□□□ -0.26
SMC6-210ENST00000621152 RBX1P62877 108 aa13.44□□□□□ -0.26
SMC6-210ENST00000621152 NKX2-5P52952 324 aaPredicted RBP13.43□□□□□ -0.26
SMC6-210ENST00000621152 FAT1Q14517 4588 aa13.43□□□□□ -0.26
SMC6-210ENST00000621152 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
SMC6-210ENST00000621152 IGHV1-24A0A0C4DH33 117 aa13.42□□□□□ -0.26
SMC6-210ENST00000621152 BLOC1S1P78537 153 aa13.42□□□□□ -0.26
SMC6-210ENST00000621152 IQCJQ1A5X6 159 aa13.42□□□□□ -0.26
SMC6-210ENST00000621152 RASL11AQ6T310 242 aa13.42□□□□□ -0.26
SMC6-210ENST00000621152 Q6ZSA8 131 aa13.42□□□□□ -0.26
SMC6-210ENST00000621152 RNASE7Q9H1E1 156 aaKnown RBP13.42□□□□□ -0.26
SMC6-210ENST00000621152 DPH3P1Q9H4G8 78 aa13.42□□□□□ -0.26
SMC6-210ENST00000621152 TWIST1Q15672 202 aa13.41□□□□□ -0.26
SMC6-210ENST00000621152 MIAQ16674 131 aa13.41□□□□□ -0.26
SMC6-210ENST00000621152 ALKAL2Q6UX46 152 aa13.41□□□□□ -0.26
SMC6-210ENST00000621152 LINC00269Q8N2A0 174 aa13.41□□□□□ -0.26
SMC6-210ENST00000621152 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
SMC6-210ENST00000621152 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
SMC6-210ENST00000621152 K7EN84 100 aa13.4□□□□□ -0.26
SMC6-210ENST00000621152 C14orf177Q52M58 125 aa13.4□□□□□ -0.26
SMC6-210ENST00000621152 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.26
SMC6-210ENST00000621152 CTRLP40313 264 aa13.39□□□□□ -0.27
SMC6-210ENST00000621152 DEFB104AQ8WTQ1 72 aa13.39□□□□□ -0.27
SMC6-210ENST00000621152 PRR34Q9NV39 138 aa13.39□□□□□ -0.27
SMC6-210ENST00000621152 HLA-DQA1P01909 254 aa13.38□□□□□ -0.27
SMC6-210ENST00000621152 USP17L23D6RBM5 183 aa13.37□□□□□ -0.27
SMC6-210ENST00000621152 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
SMC6-210ENST00000621152 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
SMC6-210ENST00000621152 CNFNQ9BYD5 112 aa13.36□□□□□ -0.27
SMC6-210ENST00000621152 GATCO43716 136 aaKnown RBP13.35□□□□□ -0.27
SMC6-210ENST00000621152 CEBPGP53567 150 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 REG3AQ06141 175 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 SCXQ7RTU7 201 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 LINC00528Q8N1L1 170 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 GTSF1Q8WW33 167 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 DNAH8Q96JB1 4490 aa13.35□□□□□ -0.27
SMC6-210ENST00000621152 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
SMC6-210ENST00000621152 KRTAP26-1Q6PEX3 210 aa13.34□□□□□ -0.27
SMC6-210ENST00000621152 GATD1Q8NB37 220 aa13.34□□□□□ -0.27
SMC6-210ENST00000621152 C20orf203Q8NBC4 194 aa13.34□□□□□ -0.27
SMC6-210ENST00000621152 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
SMC6-210ENST00000621152 CHAC1Q9BUX1 264 aa13.34□□□□□ -0.27
SMC6-210ENST00000621152 IGLV4-60A0A075B6I1 120 aa13.33□□□□□ -0.28
SMC6-210ENST00000621152 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
SMC6-210ENST00000621152 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms