RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 DAZAP1Q96EP5 407 aaKnown RBP11.33□□□□□ -0.6
HMGN3-203ENST00000620514 TMEM70Q9BUB7 260 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 MED9Q9NWA0 146 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.32□□□□□ -0.6
HMGN3-203ENST00000620514 TMEM262E9PQX1 116 aa11.32□□□□□ -0.6
HMGN3-203ENST00000620514 IFNA1P01562 189 aa11.32□□□□□ -0.6
HMGN3-203ENST00000620514 BCL2P10415 239 aa11.32□□□□□ -0.6
HMGN3-203ENST00000620514 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
HMGN3-203ENST00000620514 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
HMGN3-203ENST00000620514 CHCHD7Q9BUK0 85 aa11.32□□□□□ -0.6
HMGN3-203ENST00000620514 PDE6DO43924 150 aa11.31□□□□□ -0.6
HMGN3-203ENST00000620514 SMIM17P0DL12 118 aa11.31□□□□□ -0.6
HMGN3-203ENST00000620514 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
HMGN3-203ENST00000620514 FRZBQ92765 325 aa11.31□□□□□ -0.6
HMGN3-203ENST00000620514 RMI2Q96E14 147 aa11.31□□□□□ -0.6
HMGN3-203ENST00000620514 COX11Q9Y6N1 276 aa11.31□□□□□ -0.6
HMGN3-203ENST00000620514 MGPP08493 103 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 ELOBQ15370 118 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 KCNIP4Q6PIL6 250 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 NTM-AS1Q6ZSK4 140 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
HMGN3-203ENST00000620514 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
HMGN3-203ENST00000620514 P01737 135 aa11.29□□□□□ -0.6
HMGN3-203ENST00000620514 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
HMGN3-203ENST00000620514 C9orf62Q8N4C0 152 aa11.29□□□□□ -0.6
HMGN3-203ENST00000620514 C15orf54Q8N8G6 183 aa11.29□□□□□ -0.6
HMGN3-203ENST00000620514 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
HMGN3-203ENST00000620514 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
HMGN3-203ENST00000620514 ATRAIDQ6UW56 229 aa11.28□□□□□ -0.6
HMGN3-203ENST00000620514 ENHOQ6UWT2 76 aa11.28□□□□□ -0.6
HMGN3-203ENST00000620514 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
HMGN3-203ENST00000620514 M0QY20 66 aa11.27□□□□□ -0.61
HMGN3-203ENST00000620514 CACNG7P62955 275 aa11.27□□□□□ -0.61
HMGN3-203ENST00000620514 SUMO4Q6EEV6 95 aa11.27□□□□□ -0.61
HMGN3-203ENST00000620514 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.61
HMGN3-203ENST00000620514 AKAP14Q86UN6 197 aa11.27□□□□□ -0.61
HMGN3-203ENST00000620514 Q8N976 141 aa11.27□□□□□ -0.61
HMGN3-203ENST00000620514 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
HMGN3-203ENST00000620514 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
HMGN3-203ENST00000620514 Q0VG73 95 aa11.26□□□□□ -0.61
HMGN3-203ENST00000620514 NUDT10Q8NFP7 164 aa11.26□□□□□ -0.61
HMGN3-203ENST00000620514 NUDT11Q96G61 164 aa11.26□□□□□ -0.61
HMGN3-203ENST00000620514 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
HMGN3-203ENST00000620514 F2Z2F3 143 aa11.25□□□□□ -0.61
HMGN3-203ENST00000620514 GAGE6Q13070 117 aa11.25□□□□□ -0.61
HMGN3-203ENST00000620514 Q6ZSA8 131 aa11.25□□□□□ -0.61
HMGN3-203ENST00000620514 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
HMGN3-203ENST00000620514 K7EN84 100 aa11.24□□□□□ -0.61
HMGN3-203ENST00000620514 CRPP02741 224 aa11.24□□□□□ -0.61
HMGN3-203ENST00000620514 TAGLN2P37802 199 aaKnown RBP11.24□□□□□ -0.61
HMGN3-203ENST00000620514 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
HMGN3-203ENST00000620514 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
HMGN3-203ENST00000620514 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
HMGN3-203ENST00000620514 RNASE7Q9H1E1 156 aaKnown RBP11.24□□□□□ -0.61
HMGN3-203ENST00000620514 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
HMGN3-203ENST00000620514 NTF3P20783 257 aa11.23□□□□□ -0.61
HMGN3-203ENST00000620514 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
HMGN3-203ENST00000620514 RBX1P62877 108 aa11.23□□□□□ -0.61
HMGN3-203ENST00000620514 OCC1Q8TAD7 63 aa11.23□□□□□ -0.61
HMGN3-203ENST00000620514 TRBV25-1A0A075B6N4 114 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 H7C1H1 209 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 TRGC1P0CF51 173 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 CTRLP40313 264 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 PKIAP61925 76 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 CLPSL2Q6UWE3 100 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 DPH3P1Q9H4G8 78 aa11.22□□□□□ -0.61
HMGN3-203ENST00000620514 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
HMGN3-203ENST00000620514 IGHV1-24A0A0C4DH33 117 aa11.21□□□□□ -0.61
HMGN3-203ENST00000620514 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
HMGN3-203ENST00000620514 DEFB104AQ8WTQ1 72 aa11.21□□□□□ -0.61
HMGN3-203ENST00000620514 BLOC1S1P78537 153 aa11.2□□□□□ -0.62
HMGN3-203ENST00000620514 TWIST1Q15672 202 aa11.2□□□□□ -0.62
HMGN3-203ENST00000620514 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
HMGN3-203ENST00000620514 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
HMGN3-203ENST00000620514 PRR34Q9NV39 138 aa11.2□□□□□ -0.62
HMGN3-203ENST00000620514 HLA-DQA1P01909 254 aa11.19□□□□□ -0.62
HMGN3-203ENST00000620514 MIAQ16674 131 aa11.19□□□□□ -0.62
HMGN3-203ENST00000620514 CNFNQ9BYD5 112 aa11.19□□□□□ -0.62
HMGN3-203ENST00000620514 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
HMGN3-203ENST00000620514 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
HMGN3-203ENST00000620514 HERC1Q15751 4861 aa11.18□□□□□ -0.62
HMGN3-203ENST00000620514 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
HMGN3-203ENST00000620514 USP17L23D6RBM5 183 aa11.18□□□□□ -0.62
HMGN3-203ENST00000620514 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
HMGN3-203ENST00000620514 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
HMGN3-203ENST00000620514 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
HMGN3-203ENST00000620514 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
HMGN3-203ENST00000620514 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
HMGN3-203ENST00000620514 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
HMGN3-203ENST00000620514 TMEM243Q9BU79 118 aa11.17□□□□□ -0.62
HMGN3-203ENST00000620514 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
HMGN3-203ENST00000620514 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
HMGN3-203ENST00000620514 CEBPGP53567 150 aa11.16□□□□□ -0.62
HMGN3-203ENST00000620514 FOXA3P55318 350 aaPredicted RBP11.16□□□□□ -0.62
HMGN3-203ENST00000620514 LINC00528Q8N1L1 170 aa11.16□□□□□ -0.62
HMGN3-203ENST00000620514 GATD1Q8NB37 220 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms