RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 LINC00308Q8TCZ7 52 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
CUL4A-212ENST00000617546 NOTCH4Q99466 2003 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 FAM186AA6NE01 2351 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 EBI3Q14213 229 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 Q6JHZ5 121 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
CUL4A-212ENST00000617546 PLA2G5P39877 138 aa7.77□□□□□ -1.17
CUL4A-212ENST00000617546 ANGP03950 147 aaKnown RBP7.77□□□□□ -1.17
CUL4A-212ENST00000617546 VPREB3Q9UKI3 123 aa7.77□□□□□ -1.17
CUL4A-212ENST00000617546 RTTNQ86VV8 2226 aa7.77□□□□□ -1.17
CUL4A-212ENST00000617546 MUC22E2RYF6 1773 aaPredicted RBP7.77□□□□□ -1.17
CUL4A-212ENST00000617546 XCL1P47992 114 aa7.77□□□□□ -1.17
CUL4A-212ENST00000617546 PIP4P1Q86T03 277 aa7.77□□□□□ -1.17
CUL4A-212ENST00000617546 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 DAZAP2Q15038 168 aaPredicted RBP7.76□□□□□ -1.17
CUL4A-212ENST00000617546 C3orf56Q8N813 242 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 V9GYY9 64 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 SPRY2O43597 315 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 DIRC1Q969H9 104 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 SIRPDQ9H106 197 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 NOP10Q9NPE3 64 aaKnown RBP7.76□□□□□ -1.17
CUL4A-212ENST00000617546 ASXL3Q9C0F0 2248 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 CFHR3Q02985 330 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 ZDBF2Q9HCK1 2354 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 MYO7BQ6PIF6 2116 aa7.76□□□□□ -1.17
CUL4A-212ENST00000617546 LY6LH3BQJ8 138 aa7.75□□□□□ -1.17
CUL4A-212ENST00000617546 MSMPQ1L6U9 139 aa7.75□□□□□ -1.17
CUL4A-212ENST00000617546 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
CUL4A-212ENST00000617546 M0QY20 66 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 DNAJC13O75165 2243 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 F5H768 121 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 FBXL19-AS1Q494R0 122 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 PIK3CD-AS1Q5SR53 167 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 C20orf197Q8N268 126 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 TRBV12-3P01733 135 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 ZFAND2AQ8N6M9 145 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 INSL3P51460 131 aa7.74□□□□□ -1.17
CUL4A-212ENST00000617546 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
CUL4A-212ENST00000617546 TNRC6BQ9UPQ9 1833 aaKnown RBP7.74□□□□□ -1.17
CUL4A-212ENST00000617546 ATG2AQ2TAZ0 1938 aa7.73□□□□□ -1.17
CUL4A-212ENST00000617546 Q9HAA7 133 aa7.73□□□□□ -1.17
CUL4A-212ENST00000617546 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
CUL4A-212ENST00000617546 C10orf105Q8TEF2 133 aa7.73□□□□□ -1.17
CUL4A-212ENST00000617546 SVILO95425 2214 aa7.73□□□□□ -1.17
CUL4A-212ENST00000617546 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
CUL4A-212ENST00000617546 IGF1P05019 195 aa7.72□□□□□ -1.17
CUL4A-212ENST00000617546 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
CUL4A-212ENST00000617546 PSMG3-AS1Q96PY0 264 aa7.72□□□□□ -1.17
CUL4A-212ENST00000617546 SMIM9A6NGZ8 99 aa7.72□□□□□ -1.17
CUL4A-212ENST00000617546 WFDC9Q8NEX5 89 aa7.72□□□□□ -1.17
CUL4A-212ENST00000617546 MUC7Q8TAX7 377 aa7.71□□□□□ -1.17
CUL4A-212ENST00000617546 C10orf142B7Z368 130 aa7.71□□□□□ -1.18
CUL4A-212ENST00000617546 GNLYP22749 145 aa7.71□□□□□ -1.18
CUL4A-212ENST00000617546 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
CUL4A-212ENST00000617546 COX7BP24311 80 aa7.71□□□□□ -1.18
CUL4A-212ENST00000617546 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
CUL4A-212ENST00000617546 A6NDX4 124 aa7.7□□□□□ -1.18
CUL4A-212ENST00000617546 IGIPA6NJ69 53 aa7.7□□□□□ -1.18
CUL4A-212ENST00000617546 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
CUL4A-212ENST00000617546 ETDCA0A1B0GVM5 59 aa7.7□□□□□ -1.18
CUL4A-212ENST00000617546 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
CUL4A-212ENST00000617546 TSHBP01222 138 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 K7EQG2 157 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 GYPEP15421 78 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 DEFB112Q30KQ8 113 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 BLCAPP62952 87 aa7.69□□□□□ -1.18
CUL4A-212ENST00000617546 DIDO1Q9BTC0 2240 aaKnown RBP7.69□□□□□ -1.18
CUL4A-212ENST00000617546 C20orf173Q96LM9 149 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 CAMK2N2Q96S95 79 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 A0A096LNJ9 63 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 LINC00467Q9BRT7 94 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 NCOA6Q14686 2063 aaPredicted RBP7.68□□□□□ -1.18
CUL4A-212ENST00000617546 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 C4orf3Q8WVX3 66 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 INTS1Q8N201 2190 aaKnown RBP7.68□□□□□ -1.18
CUL4A-212ENST00000617546 BPY2O14599 106 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 NDUFB1O75438 58 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 ENHOQ6UWT2 76 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 C9orf85Q96MD7 179 aa7.68□□□□□ -1.18
CUL4A-212ENST00000617546 KLLNB2CW77 178 aa7.67□□□□□ -1.18
CUL4A-212ENST00000617546 IGHV4-59P01825 116 aa7.67□□□□□ -1.18
CUL4A-212ENST00000617546 CCL24O00175 119 aa7.67□□□□□ -1.18
CUL4A-212ENST00000617546 NCR3O14931 201 aa7.67□□□□□ -1.18
CUL4A-212ENST00000617546 RNASE3P12724 160 aaKnown RBP7.67□□□□□ -1.18
CUL4A-212ENST00000617546 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
CUL4A-212ENST00000617546 Q8N6K4 173 aa7.67□□□□□ -1.18
CUL4A-212ENST00000617546 LYRM9A8MSI8 78 aa7.67□□□□□ -1.18
CUL4A-212ENST00000617546 Q6ZS46 218 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms