RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 SUMO4Q6EEV6 95 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 TRAV13-1A0A0B4J241 112 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 ATMQ13315 3056 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 F8W735 103 aaPredicted RBP7.87□□□□□ -1.15
CTCFL-216ENST00000608263 HOXD3P31249 432 aaPredicted RBP7.87□□□□□ -1.15
CTCFL-216ENST00000608263 ZNF415Q09FC8 603 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 C20orf78Q9BR46 151 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 A0A0J9YXV3 536 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 C9orf47Q6ZRZ4 202 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 MDFICQ9P1T7 246 aa7.87□□□□□ -1.15
CTCFL-216ENST00000608263 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
CTCFL-216ENST00000608263 RASL10AQ92737 203 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 ATP6V0BQ99437 205 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 DCHS1Q96JQ0 3298 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 LGALS1P09382 135 aaKnown RBP7.86□□□□□ -1.15
CTCFL-216ENST00000608263 PLA2G2AP14555 144 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 ZFP2Q6ZN57 461 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 ANAPC13Q9BS18 74 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 OR13C6PQ8NH95 151 aa7.86□□□□□ -1.15
CTCFL-216ENST00000608263 U3KQK5 164 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 TRGV11A0A075B6L2 103 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 TRAV8-3A0A0A6YYJ7 113 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 C10orf99Q6UWK7 81 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 M0R2P5 195 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 CCL24O00175 119 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 CEMP1Q6PRD7 247 aaPredicted RBP7.85□□□□□ -1.15
CTCFL-216ENST00000608263 HIGD1BQ9P298 99 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
CTCFL-216ENST00000608263 Q6ZS46 218 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 ZNF48Q96MX3 618 aaPredicted RBP7.84□□□□□ -1.15
CTCFL-216ENST00000608263 SPAG8Q99932 426 aaPredicted RBP7.84□□□□□ -1.15
CTCFL-216ENST00000608263 ZZEF1O43149 2961 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 TAL2Q16559 108 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 TRPT1Q86TN4 253 aaKnown RBP7.84□□□□□ -1.15
CTCFL-216ENST00000608263 APRG1Q8IVJ8 170 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 Q8N1Y9 231 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 STAB1Q9NY15 2570 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 A4D1N5 150 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 C2orf82Q6UX34 121 aa7.84□□□□□ -1.15
CTCFL-216ENST00000608263 C11orf68Q9H3H3 251 aaKnown RBP7.84□□□□□ -1.15
CTCFL-216ENST00000608263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.83□□□□□ -1.16
CTCFL-216ENST00000608263 IGKV2-29A2NJV5 120 aaPredicted RBP7.83□□□□□ -1.16
CTCFL-216ENST00000608263 HHLA3Q9XRX5 114 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 P0DMU3 169 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 EDN2P20800 178 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 DAND5Q8N907 189 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 INSL3P51460 131 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 NRACQ8N912 160 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 TOMM6Q96B49 74 aa7.83□□□□□ -1.16
CTCFL-216ENST00000608263 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
CTCFL-216ENST00000608263 PRM2P04554 102 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 ELANEP08246 267 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 ZFAND2AQ8N6M9 145 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 CITED2Q99967 270 aaPredicted RBP7.82□□□□□ -1.16
CTCFL-216ENST00000608263 CHCHD5Q9BSY4 110 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 CLPSL1A2RUU4 121 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 I3L3M4 83 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 SCGB1A1P11684 91 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
CTCFL-216ENST00000608263 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 LENEPQ9Y5L5 61 aa7.82□□□□□ -1.16
CTCFL-216ENST00000608263 E9PLD3 99 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 SLC25A20O43772 301 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 TSPAN13O95857 204 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 IGHG4P01861 327 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 IGHV4-31P0DP07 118 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 DNAJC9-AS1A6NH13 148 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 MUSTN1Q8IVN3 82 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 PPDPFLQ8WWR9 84 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 A0A096LPF7 62 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 Q8N6K4 173 aa7.81□□□□□ -1.16
CTCFL-216ENST00000608263 DMDP11532 3685 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.8□□□□□ -1.16
CTCFL-216ENST00000608263 ZNRF2Q8NHG8 242 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 IGHV4OR15-8A0A075B7B6 117 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 A0A087WW49 117 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 EBI3Q14213 229 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 TM2D2Q9BX73 214 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 C11orf71Q6IPW1 123 aa7.8□□□□□ -1.16
CTCFL-216ENST00000608263 FLNCQ14315 2725 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE12JA6NER3 117 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE7O76087 117 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE12FP0CL80 117 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE12GP0CL81 117 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE12IP0CL82 117 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE4Q13068 117 aa7.79□□□□□ -1.16
CTCFL-216ENST00000608263 GAGE5Q13069 117 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms