RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 PRELID3AQ96N28 172 aa7.85□□□□□ -1.15
CTCFL-214ENST00000608108 EDA2RQ9HAV5 297 aa7.85□□□□□ -1.15
CTCFL-214ENST00000608108 TRBV6-4A0A1B0GX49 114 aa7.84□□□□□ -1.15
CTCFL-214ENST00000608108 P0DMU3 169 aa7.84□□□□□ -1.15
CTCFL-214ENST00000608108 FAM231AP0DMU4 169 aa7.84□□□□□ -1.15
CTCFL-214ENST00000608108 FAM231CP0DMU5 169 aa7.84□□□□□ -1.15
CTCFL-214ENST00000608108 OR10J3Q5JRS4 329 aa7.84□□□□□ -1.15
CTCFL-214ENST00000608108 ALKBH7Q9BT30 221 aaPredicted RBP7.84□□□□□ -1.15
CTCFL-214ENST00000608108 HHLA3Q9XRX5 114 aa7.84□□□□□ -1.15
CTCFL-214ENST00000608108 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 PPP1R17O96001 155 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 NPYP01303 97 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 RHOHQ15669 191 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 NRACQ8N912 160 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 PRO0255Q9UI72 69 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 LAMTOR2Q9Y2Q5 125 aa7.83□□□□□ -1.16
CTCFL-214ENST00000608108 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
CTCFL-214ENST00000608108 CRYBA4P53673 196 aa7.82□□□□□ -1.16
CTCFL-214ENST00000608108 PRADC1Q9BSG0 188 aa7.82□□□□□ -1.16
CTCFL-214ENST00000608108 NIT2Q9NQR4 276 aa7.82□□□□□ -1.16
CTCFL-214ENST00000608108 TRAV26-1A0A087WT03 109 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 A0A0J9YY99 117 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 TRBV10-1A0A0K0K1A3 114 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 NEXN-AS1Q8NBZ9 246 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 Q9UF83 564 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 TRAV10A0A0B4J240 114 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 LOC100131303A0A0U1RQF7 123 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 PAX4O43316 350 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BKO60814 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BJP06899 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BOP23527 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BBP33778 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 RAB5BP61020 215 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
CTCFL-214ENST00000608108 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 ST20Q9HBF5 79 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 TNFRSF18Q9Y5U5 241 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 STARD9Q9P2P6 4700 aa7.81□□□□□ -1.16
CTCFL-214ENST00000608108 TRBV7-3A0A075B6L6 115 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 TRBV6-5A0A0K0K1A5 114 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 GYPEP15421 78 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 RPL36AP83881 106 aaKnown RBP7.8□□□□□ -1.16
CTCFL-214ENST00000608108 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 RPL36ALQ969Q0 106 aaKnown RBP7.8□□□□□ -1.16
CTCFL-214ENST00000608108 VSIG2Q96IQ7 327 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 DNAJC30Q96LL9 226 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
CTCFL-214ENST00000608108 LOC389332A0A1B0GUA5 103 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 GAGE12JA6NER3 117 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 SDHAF1A6NFY7 115 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 GAGE1Q13065 139 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 GAGE4Q13068 117 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 GAGE5Q13069 117 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 GAGE13Q4V321 117 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 ZNRF2Q8NHG8 242 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
CTCFL-214ENST00000608108 LYSTQ99698 3801 aa7.79□□□□□ -1.16
CTCFL-214ENST00000608108 PHLDA1Q8WV24 401 aaPredicted RBP7.78□□□□□ -1.16
CTCFL-214ENST00000608108 TMEM70Q9BUB7 260 aa7.78□□□□□ -1.16
CTCFL-214ENST00000608108 SMIM2Q9BVW6 85 aa7.78□□□□□ -1.16
CTCFL-214ENST00000608108 LINC00694P0DN24 101 aa7.78□□□□□ -1.16
CTCFL-214ENST00000608108 IFI27P40305 119 aaPredicted RBP7.78□□□□□ -1.16
CTCFL-214ENST00000608108 UBE2D3P61077 147 aa7.78□□□□□ -1.16
CTCFL-214ENST00000608108 UBE2D2P62837 147 aa7.78□□□□□ -1.16
CTCFL-214ENST00000608108 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
CTCFL-214ENST00000608108 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
CTCFL-214ENST00000608108 PMCHP20382 165 aa7.77□□□□□ -1.17
CTCFL-214ENST00000608108 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
CTCFL-214ENST00000608108 RPL32P62910 135 aaKnown RBP7.77□□□□□ -1.17
CTCFL-214ENST00000608108 Q0VG73 95 aa7.77□□□□□ -1.17
CTCFL-214ENST00000608108 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
CTCFL-214ENST00000608108 PRSS3P2Q8NHM4 247 aa7.77□□□□□ -1.17
CTCFL-214ENST00000608108 ICOSQ9Y6W8 199 aa7.77□□□□□ -1.17
CTCFL-214ENST00000608108 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
CTCFL-214ENST00000608108 TRBV27A0A0K0K1C4 114 aa7.76□□□□□ -1.17
CTCFL-214ENST00000608108 H3BNG1 76 aa7.76□□□□□ -1.17
CTCFL-214ENST00000608108 VCYO14598 125 aa7.76□□□□□ -1.17
CTCFL-214ENST00000608108 DAZ4Q86SG3 579 aaKnown RBP7.76□□□□□ -1.17
CTCFL-214ENST00000608108 Q8N8P6 123 aa7.76□□□□□ -1.17
CTCFL-214ENST00000608108 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
CTCFL-214ENST00000608108 NXT2Q9NPJ8 142 aaKnown RBP7.76□□□□□ -1.17
CTCFL-214ENST00000608108 DAZ3Q9NR90 486 aaKnown RBP7.76□□□□□ -1.17
CTCFL-214ENST00000608108 TMA7Q9Y2S6 64 aaKnown RBP7.76□□□□□ -1.17
CTCFL-214ENST00000608108 IGLV2-18A0A075B6J9 118 aa7.75□□□□□ -1.17
CTCFL-214ENST00000608108 A0A096LPF7 62 aa7.75□□□□□ -1.17
CTCFL-214ENST00000608108 I3L3M4 83 aa7.75□□□□□ -1.17
CTCFL-214ENST00000608108 NUDT3O95989 172 aa7.75□□□□□ -1.17
CTCFL-214ENST00000608108 MRPL23Q16540 153 aaKnown RBP7.75□□□□□ -1.17
CTCFL-214ENST00000608108 RNASEKQ6P5S7 137 aaKnown RBP7.75□□□□□ -1.17
CTCFL-214ENST00000608108 FA2HQ7L5A8 372 aa7.75□□□□□ -1.17
CTCFL-214ENST00000608108 DEFB104AQ8WTQ1 72 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms