RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
SSBP4-212ENST00000601919 TRBV6-5A0A0K0K1A5 114 aa13.11□□□□□ -0.31
SSBP4-212ENST00000601919 NPYP01303 97 aa13.11□□□□□ -0.31
SSBP4-212ENST00000601919 HTN3P15516 51 aa13.11□□□□□ -0.31
SSBP4-212ENST00000601919 RPL39LQ96EH5 51 aaKnown RBP13.11□□□□□ -0.31
SSBP4-212ENST00000601919 TENM3Q9P273 2699 aa13.11□□□□□ -0.31
SSBP4-212ENST00000601919 GAS8-AS1O95177 125 aa13.1□□□□□ -0.31
SSBP4-212ENST00000601919 HOXA5P20719 270 aa13.1□□□□□ -0.31
SSBP4-212ENST00000601919 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
SSBP4-212ENST00000601919 SUMO2P61956 95 aaKnown RBP13.1□□□□□ -0.31
SSBP4-212ENST00000601919 Q0VG73 95 aa13.1□□□□□ -0.31
SSBP4-212ENST00000601919 C18orf32Q8TCD1 76 aa13.1□□□□□ -0.31
SSBP4-212ENST00000601919 MEGF8Q7Z7M0 2845 aa13.09□□□□□ -0.31
SSBP4-212ENST00000601919 PAX4O43316 350 aa13.09□□□□□ -0.31
SSBP4-212ENST00000601919 PMCHP20382 165 aa13.09□□□□□ -0.31
SSBP4-212ENST00000601919 CRYBA4P53673 196 aa13.09□□□□□ -0.31
SSBP4-212ENST00000601919 RPL36AP83881 106 aaKnown RBP13.09□□□□□ -0.31
SSBP4-212ENST00000601919 Q6ZTC4 211 aa13.09□□□□□ -0.31
SSBP4-212ENST00000601919 BAGE3Q86Y29 109 aa13.09□□□□□ -0.31
SSBP4-212ENST00000601919 RPL36ALQ969Q0 106 aaKnown RBP13.09□□□□□ -0.31
SSBP4-212ENST00000601919 PRSS47A8MTI9 375 aa13.08□□□□□ -0.32
SSBP4-212ENST00000601919 RPL32P62910 135 aaKnown RBP13.08□□□□□ -0.32
SSBP4-212ENST00000601919 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
SSBP4-212ENST00000601919 PRSS3P2Q8NHM4 247 aa13.08□□□□□ -0.32
SSBP4-212ENST00000601919 NXT2Q9NPJ8 142 aaKnown RBP13.08□□□□□ -0.32
SSBP4-212ENST00000601919 TRBV7-3A0A075B6L6 115 aa13.07□□□□□ -0.32
SSBP4-212ENST00000601919 TRAV10A0A0B4J240 114 aa13.07□□□□□ -0.32
SSBP4-212ENST00000601919 P0DMU3 169 aa13.07□□□□□ -0.32
SSBP4-212ENST00000601919 FAM231AP0DMU4 169 aa13.07□□□□□ -0.32
SSBP4-212ENST00000601919 FAM231CP0DMU5 169 aa13.07□□□□□ -0.32
SSBP4-212ENST00000601919 DEFB131BA0A096LNP1 70 aa13.06□□□□□ -0.32
SSBP4-212ENST00000601919 LOC389332A0A1B0GUA5 103 aa13.06□□□□□ -0.32
SSBP4-212ENST00000601919 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
SSBP4-212ENST00000601919 VCYO14598 125 aa13.06□□□□□ -0.32
SSBP4-212ENST00000601919 S100A6P06703 90 aa13.06□□□□□ -0.32
SSBP4-212ENST00000601919 SMIM2Q9BVW6 85 aa13.06□□□□□ -0.32
SSBP4-212ENST00000601919 GYPEP15421 78 aa13.05□□□□□ -0.32
SSBP4-212ENST00000601919 NDUFA6P56556 154 aa13.05□□□□□ -0.32
SSBP4-212ENST00000601919 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
SSBP4-212ENST00000601919 FA2HQ7L5A8 372 aa13.05□□□□□ -0.32
SSBP4-212ENST00000601919 ZNRF2Q8NHG8 242 aa13.05□□□□□ -0.32
SSBP4-212ENST00000601919 TMEM70Q9BUB7 260 aa13.05□□□□□ -0.32
SSBP4-212ENST00000601919 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
SSBP4-212ENST00000601919 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
SSBP4-212ENST00000601919 H3BNG1 76 aa13.04□□□□□ -0.32
SSBP4-212ENST00000601919 TCAPO15273 167 aa13.04□□□□□ -0.32
SSBP4-212ENST00000601919 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
SSBP4-212ENST00000601919 Q8N8P6 123 aa13.04□□□□□ -0.32
SSBP4-212ENST00000601919 KIR2DL4Q99706 377 aa13.04□□□□□ -0.32
SSBP4-212ENST00000601919 A0A0J9YY99 117 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 TRBV27A0A0K0K1C4 114 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 GAGE12JA6NER3 117 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 I3L3M4 83 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 K7EMI3 77 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 IFI27P40305 119 aaPredicted RBP13.03□□□□□ -0.32
SSBP4-212ENST00000601919 GAGE1Q13065 139 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 GAGE4Q13068 117 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 GAGE5Q13069 117 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 GAGE13Q4V321 117 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
SSBP4-212ENST00000601919 DAZ4Q86SG3 579 aaKnown RBP13.03□□□□□ -0.32
SSBP4-212ENST00000601919 CHCHD1Q96BP2 118 aaKnown RBP13.03□□□□□ -0.32
SSBP4-212ENST00000601919 DAZ3Q9NR90 486 aaKnown RBP13.03□□□□□ -0.32
SSBP4-212ENST00000601919 LINC00614P0C842 121 aa13.02□□□□□ -0.33
SSBP4-212ENST00000601919 UBE2D3P61077 147 aa13.02□□□□□ -0.33
SSBP4-212ENST00000601919 UBE2D2P62837 147 aa13.02□□□□□ -0.33
SSBP4-212ENST00000601919 COA6Q5JTJ3 125 aaKnown RBP13.02□□□□□ -0.33
SSBP4-212ENST00000601919 RNASEKQ6P5S7 137 aaKnown RBP13.02□□□□□ -0.33
SSBP4-212ENST00000601919 NIT1Q86X76 327 aa13.02□□□□□ -0.33
SSBP4-212ENST00000601919 AP5S1Q9NUS5 200 aa13.02□□□□□ -0.33
SSBP4-212ENST00000601919 MRPL23Q16540 153 aaKnown RBP13.01□□□□□ -0.33
SSBP4-212ENST00000601919 VSIG2Q96IQ7 327 aa13.01□□□□□ -0.33
SSBP4-212ENST00000601919 Q9UF83 564 aa13.01□□□□□ -0.33
SSBP4-212ENST00000601919 ICOSQ9Y6W8 199 aa13.01□□□□□ -0.33
SSBP4-212ENST00000601919 HUWE1Q7Z6Z7 4374 aaKnown RBP13.01□□□□□ -0.33
SSBP4-212ENST00000601919 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
SSBP4-212ENST00000601919 LOC100131303A0A0U1RQF7 123 aa13□□□□□ -0.33
SSBP4-212ENST00000601919 IGLV2-18A0A075B6J9 118 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 LINC01546A6NGU7 62 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 SERF1AO75920 110 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 LINC00694P0DN24 101 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 FCER1GP30273 86 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 COTL1Q14019 142 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 ORMDL2Q53FV1 153 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 TMEM97Q5BJF2 176 aa12.99□□□□□ -0.33
SSBP4-212ENST00000601919 PHLDA1Q8WV24 401 aaPredicted RBP12.99□□□□□ -0.33
SSBP4-212ENST00000601919 COL7A1Q02388 2944 aa12.98□□□□□ -0.33
SSBP4-212ENST00000601919 HSBP1O75506 76 aa12.98□□□□□ -0.33
SSBP4-212ENST00000601919 G0S2P27469 103 aa12.98□□□□□ -0.33
SSBP4-212ENST00000601919 LAGE3Q14657 143 aa12.98□□□□□ -0.33
SSBP4-212ENST00000601919 ATP6V0E2Q8NHE4 81 aa12.98□□□□□ -0.33
SSBP4-212ENST00000601919 NEGR1Q7Z3B1 354 aa12.97□□□□□ -0.33
SSBP4-212ENST00000601919 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.33
SSBP4-212ENST00000601919 ESDP10768 282 aa12.96□□□□□ -0.33
SSBP4-212ENST00000601919 C15orf53Q8NAA6 179 aa12.96□□□□□ -0.33
SSBP4-212ENST00000601919 URB1-AS1Q96HZ7 61 aa12.96□□□□□ -0.33
SSBP4-212ENST00000601919 GTSF1LQ9H1H1 148 aa12.96□□□□□ -0.33
SSBP4-212ENST00000601919 TSHBP01222 138 aa12.95□□□□□ -0.34
SSBP4-212ENST00000601919 NUDT3O95989 172 aa12.94□□□□□ -0.34
SSBP4-212ENST00000601919 STAB2Q8WWQ8 2551 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms