RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 MRAP2Q96G30 205 aa16.01■□□□□ 0.15
IRF3-227ENST00000600911 TRAV10A0A0B4J240 114 aa16.01■□□□□ 0.15
IRF3-227ENST00000600911 ALKBH7Q9BT30 221 aaPredicted RBP16.01■□□□□ 0.15
IRF3-227ENST00000600911 PRELID3AQ96N28 172 aa16■□□□□ 0.15
IRF3-227ENST00000600911 PAX4O43316 350 aa15.99■□□□□ 0.15
IRF3-227ENST00000600911 SRIP30626 198 aa15.99■□□□□ 0.15
IRF3-227ENST00000600911 DEFB104AQ8WTQ1 72 aa15.99■□□□□ 0.15
IRF3-227ENST00000600911 GAGE12JA6NER3 117 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 TNFRSF6BO95407 300 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 GYPEP15421 78 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 GAGE1Q13065 139 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 GAGE4Q13068 117 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 GAGE5Q13069 117 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 RHOHQ15669 191 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 GAGE13Q4V321 117 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 ORMDL3Q8N138 153 aa15.98■□□□□ 0.15
IRF3-227ENST00000600911 LINC00694P0DN24 101 aa15.97■□□□□ 0.15
IRF3-227ENST00000600911 NEGR1Q7Z3B1 354 aa15.97■□□□□ 0.15
IRF3-227ENST00000600911 IQCJQ1A5X6 159 aa15.97■□□□□ 0.15
IRF3-227ENST00000600911 OR10J3Q5JRS4 329 aa15.97■□□□□ 0.15
IRF3-227ENST00000600911 ZNRF2Q8NHG8 242 aa15.97■□□□□ 0.15
IRF3-227ENST00000600911 NIT2Q9NQR4 276 aa15.97■□□□□ 0.15
IRF3-227ENST00000600911 A0A096LPF7 62 aa15.95■□□□□ 0.14
IRF3-227ENST00000600911 IGHV3-38A0A0C4DH36 116 aa15.94■□□□□ 0.14
IRF3-227ENST00000600911 PPBPP02775 128 aa15.94■□□□□ 0.14
IRF3-227ENST00000600911 TRBV10-1A0A0K0K1A3 114 aa15.94■□□□□ 0.14
IRF3-227ENST00000600911 H7C1H1 209 aa15.94■□□□□ 0.14
IRF3-227ENST00000600911 PRADC1Q9BSG0 188 aa15.94■□□□□ 0.14
IRF3-227ENST00000600911 TRBV6-5A0A0K0K1A5 114 aa15.93■□□□□ 0.14
IRF3-227ENST00000600911 UBE2D3P61077 147 aa15.93■□□□□ 0.14
IRF3-227ENST00000600911 UBE2D2P62837 147 aa15.93■□□□□ 0.14
IRF3-227ENST00000600911 TRBV7-3A0A075B6L6 115 aa15.92■□□□□ 0.14
IRF3-227ENST00000600911 LOC389332A0A1B0GUA5 103 aa15.92■□□□□ 0.14
IRF3-227ENST00000600911 POLR2KP53803 58 aaKnown RBP15.92■□□□□ 0.14
IRF3-227ENST00000600911 ZFAND6Q6FIF0 208 aa15.92■□□□□ 0.14
IRF3-227ENST00000600911 C18orf32Q8TCD1 76 aa15.92■□□□□ 0.14
IRF3-227ENST00000600911 SDHAF1A6NFY7 115 aa15.91■□□□□ 0.14
IRF3-227ENST00000600911 IGLL5B9A064 214 aa15.91■□□□□ 0.14
IRF3-227ENST00000600911 LYSTQ99698 3801 aa15.91■□□□□ 0.14
IRF3-227ENST00000600911 TMEM70Q9BUB7 260 aa15.91■□□□□ 0.14
IRF3-227ENST00000600911 SUMO2P61956 95 aaKnown RBP15.9■□□□□ 0.14
IRF3-227ENST00000600911 RPL36AP83881 106 aaKnown RBP15.9■□□□□ 0.14
IRF3-227ENST00000600911 RPL36ALQ969Q0 106 aaKnown RBP15.9■□□□□ 0.14
IRF3-227ENST00000600911 URB1-AS1Q96HZ7 61 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 ST20Q9HBF5 79 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 TNFRSF18Q9Y5U5 241 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 IGLV2-18A0A075B6J9 118 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BKO60814 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BJP06899 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BOP23527 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BBP33778 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BDP58876 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BCP62807 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST2H2BEQ16778 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.9■□□□□ 0.14
IRF3-227ENST00000600911 CEMP1Q6PRD7 247 aaPredicted RBP15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BHQ93079 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 DNAJC30Q96LL9 226 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BNQ99877 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 HIST1H2BMQ99879 126 aa15.9■□□□□ 0.14
IRF3-227ENST00000600911 NUDT3O95989 172 aa15.89■□□□□ 0.13
IRF3-227ENST00000600911 WWC2-AS2Q96NR7 200 aa15.88■□□□□ 0.13
IRF3-227ENST00000600911 H3BNG1 76 aa15.87■□□□□ 0.13
IRF3-227ENST00000600911 IFI27P40305 119 aaPredicted RBP15.87■□□□□ 0.13
IRF3-227ENST00000600911 C20orf78Q9BR46 151 aa15.87■□□□□ 0.13
IRF3-227ENST00000600911 SMIM2Q9BVW6 85 aa15.87■□□□□ 0.13
IRF3-227ENST00000600911 LAMTOR2Q9Y2Q5 125 aa15.87■□□□□ 0.13
IRF3-227ENST00000600911 ICOSQ9Y6W8 199 aa15.87■□□□□ 0.13
IRF3-227ENST00000600911 PRSS47A8MTI9 375 aa15.86■□□□□ 0.13
IRF3-227ENST00000600911 LINC00310P59036 64 aa15.86■□□□□ 0.13
IRF3-227ENST00000600911 MUC7Q8TAX7 377 aa15.86■□□□□ 0.13
IRF3-227ENST00000600911 NTM-AS1Q6ZSK4 140 aa15.86■□□□□ 0.13
IRF3-227ENST00000600911 MAP1LC3AQ9H492 121 aa15.86■□□□□ 0.13
IRF3-227ENST00000600911 TRBV27A0A0K0K1C4 114 aa15.84■□□□□ 0.13
IRF3-227ENST00000600911 C1orf196B1AJZ1 125 aa15.84■□□□□ 0.13
IRF3-227ENST00000600911 TCAPO15273 167 aa15.84■□□□□ 0.13
IRF3-227ENST00000600911 MRPL23Q16540 153 aaKnown RBP15.84■□□□□ 0.13
IRF3-227ENST00000600911 ATP6V0E2Q8NHE4 81 aa15.84■□□□□ 0.13
IRF3-227ENST00000600911 APLNQ9ULZ1 77 aa15.84■□□□□ 0.13
IRF3-227ENST00000600911 PPP1R17O96001 155 aa15.83■□□□□ 0.13
IRF3-227ENST00000600911 TSHBP01222 138 aa15.83■□□□□ 0.13
IRF3-227ENST00000600911 NUPR2A6NF83 97 aa15.82■□□□□ 0.12
IRF3-227ENST00000600911 NUPR1O60356 82 aa15.82■□□□□ 0.12
IRF3-227ENST00000600911 RPL32P62910 135 aaKnown RBP15.82■□□□□ 0.12
IRF3-227ENST00000600911 Q8N8P6 123 aa15.82■□□□□ 0.12
IRF3-227ENST00000600911 PMCHP20382 165 aa15.81■□□□□ 0.12
IRF3-227ENST00000600911 TENM2Q9NT68 2774 aa15.81■□□□□ 0.12
IRF3-227ENST00000600911 I3L3M4 83 aa15.8■□□□□ 0.12
IRF3-227ENST00000600911 VCYO14598 125 aa15.8■□□□□ 0.12
IRF3-227ENST00000600911 Q0VG73 95 aa15.8■□□□□ 0.12
IRF3-227ENST00000600911 ESRGQ1W209 222 aa15.8■□□□□ 0.12
IRF3-227ENST00000600911 DAZ4Q86SG3 579 aaKnown RBP15.8■□□□□ 0.12
IRF3-227ENST00000600911 NIT1Q86X76 327 aa15.8■□□□□ 0.12
IRF3-227ENST00000600911 DAZ3Q9NR90 486 aaKnown RBP15.8■□□□□ 0.12
IRF3-227ENST00000600911 LYPD5Q6UWN5 251 aa15.79■□□□□ 0.12
IRF3-227ENST00000600911 C15orf53Q8NAA6 179 aa15.79■□□□□ 0.12
IRF3-227ENST00000600911 PRSS3P2Q8NHM4 247 aa15.79■□□□□ 0.12
IRF3-227ENST00000600911 GTSF1LQ9H1H1 148 aa15.79■□□□□ 0.12
IRF3-227ENST00000600911 DNAH1Q9P2D7 4330 aa15.77■□□□□ 0.12
IRF3-227ENST00000600911 CHCHD7Q9BUK0 85 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms