RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 FRZBQ92765 325 aa12.7□□□□□ -0.38
GTF2F1-205ENST00000595047 RPL36ALQ969Q0 106 aaKnown RBP12.7□□□□□ -0.38
GTF2F1-205ENST00000595047 MRAP2Q96G30 205 aa12.7□□□□□ -0.38
GTF2F1-205ENST00000595047 NEXN-AS1Q8NBZ9 246 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 ZNRF2Q8NHG8 242 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 SCO1O75880 301 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 YPEL4Q96NS1 127 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 GNB1LQ9BYB4 327 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 NIT2Q9NQR4 276 aa12.69□□□□□ -0.38
GTF2F1-205ENST00000595047 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 NCR2O95944 276 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 CKS2P33552 79 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 NEGR1Q7Z3B1 354 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 SH2D6Q7Z4S9 175 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 DNAJC30Q96LL9 226 aa12.68□□□□□ -0.38
GTF2F1-205ENST00000595047 GAS8-AS1O95177 125 aa12.67□□□□□ -0.38
GTF2F1-205ENST00000595047 HLA-DQA1P01909 254 aa12.67□□□□□ -0.38
GTF2F1-205ENST00000595047 ATP6V0E2Q8NHE4 81 aa12.67□□□□□ -0.38
GTF2F1-205ENST00000595047 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
GTF2F1-205ENST00000595047 APCSP02743 223 aa12.66□□□□□ -0.38
GTF2F1-205ENST00000595047 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
GTF2F1-205ENST00000595047 NACAE9PAV3 2078 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 D6R8Y8 96 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 PPBPP02775 128 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 MT-ND6P03923 174 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 LINC00694P0DN24 101 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 UBE2D3P61077 147 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 UBE2D2P62837 147 aa12.65□□□□□ -0.38
GTF2F1-205ENST00000595047 DNAH7Q8WXX0 4024 aa12.65□□□□□ -0.39
GTF2F1-205ENST00000595047 PPP1R17O96001 155 aa12.64□□□□□ -0.39
GTF2F1-205ENST00000595047 RPS10P46783 165 aaKnown RBP12.64□□□□□ -0.39
GTF2F1-205ENST00000595047 ORMDL3Q8N138 153 aa12.64□□□□□ -0.39
GTF2F1-205ENST00000595047 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
GTF2F1-205ENST00000595047 CCL18P55774 89 aa12.63□□□□□ -0.39
GTF2F1-205ENST00000595047 FABP9Q0Z7S8 132 aa12.63□□□□□ -0.39
GTF2F1-205ENST00000595047 MRPL18Q9H0U6 180 aaKnown RBP12.63□□□□□ -0.39
GTF2F1-205ENST00000595047 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
GTF2F1-205ENST00000595047 TRAPPC1Q9Y5R8 145 aa12.63□□□□□ -0.39
GTF2F1-205ENST00000595047 IGHV3-38A0A0C4DH36 116 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 TRBV6-5A0A0K0K1A5 114 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 ESRGQ1W209 222 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 KIAA1644Q3SXP7 199 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 NRACQ8N912 160 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 GTSF1LQ9H1H1 148 aa12.62□□□□□ -0.39
GTF2F1-205ENST00000595047 DAZ4Q86SG3 579 aaKnown RBP12.61□□□□□ -0.39
GTF2F1-205ENST00000595047 DAZ3Q9NR90 486 aaKnown RBP12.61□□□□□ -0.39
GTF2F1-205ENST00000595047 COLCA2A8K830 154 aa12.6□□□□□ -0.39
GTF2F1-205ENST00000595047 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
GTF2F1-205ENST00000595047 UBE2DNLQ8IWF7 75 aa12.6□□□□□ -0.39
GTF2F1-205ENST00000595047 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
GTF2F1-205ENST00000595047 NPYP01303 97 aa12.59□□□□□ -0.39
GTF2F1-205ENST00000595047 PHOX2AO14813 284 aa12.58□□□□□ -0.4
GTF2F1-205ENST00000595047 TIRAPP58753 221 aa12.58□□□□□ -0.4
GTF2F1-205ENST00000595047 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
GTF2F1-205ENST00000595047 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
GTF2F1-205ENST00000595047 LAMTOR2Q9Y2Q5 125 aa12.58□□□□□ -0.4
GTF2F1-205ENST00000595047 LINC00588Q9Y4M8 146 aa12.58□□□□□ -0.4
GTF2F1-205ENST00000595047 PMCHP20382 165 aa12.57□□□□□ -0.4
GTF2F1-205ENST00000595047 TMEM70Q9BUB7 260 aa12.57□□□□□ -0.4
GTF2F1-205ENST00000595047 STARD9Q9P2P6 4700 aa12.57□□□□□ -0.4
GTF2F1-205ENST00000595047 CSMD3Q7Z407 3707 aa12.57□□□□□ -0.4
GTF2F1-205ENST00000595047 RAB5AP20339 215 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 POLR2KP53803 58 aaKnown RBP12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 COTL1Q14019 142 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 TMEM97Q5BJF2 176 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 LGALS9CQ6DKI2 356 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 MRPS16Q9Y3D3 137 aaKnown RBP12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 I3L3M4 83 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 VCYO14598 125 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 LELP1Q5T871 98 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
GTF2F1-205ENST00000595047 LY6G6CO95867 125 aa12.55□□□□□ -0.4
GTF2F1-205ENST00000595047 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
GTF2F1-205ENST00000595047 MAP1LC3AQ9H492 121 aa12.55□□□□□ -0.4
GTF2F1-205ENST00000595047 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 TRAV8-6A0A0B4J262 113 aa12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 TRBV27A0A0K0K1C4 114 aa12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 LOC389332A0A1B0GUA5 103 aa12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 RPL32P62910 135 aaKnown RBP12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 DYNC2H1Q8NCM8 4307 aaKnown RBP12.54□□□□□ -0.4
GTF2F1-205ENST00000595047 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
GTF2F1-205ENST00000595047 SMIM2Q9BVW6 85 aa12.53□□□□□ -0.4
GTF2F1-205ENST00000595047 TRGC2P03986 189 aa12.52□□□□□ -0.41
GTF2F1-205ENST00000595047 KIR2DL4Q99706 377 aa12.52□□□□□ -0.41
GTF2F1-205ENST00000595047 UPK3BQ9BT76 320 aa12.52□□□□□ -0.41
GTF2F1-205ENST00000595047 TRBV25-1A0A075B6N4 114 aa12.51□□□□□ -0.41
GTF2F1-205ENST00000595047 IGHV1-24A0A0C4DH33 117 aa12.51□□□□□ -0.41
GTF2F1-205ENST00000595047 PRSS47A8MTI9 375 aa12.51□□□□□ -0.41
GTF2F1-205ENST00000595047 FCER1GP30273 86 aa12.51□□□□□ -0.41
GTF2F1-205ENST00000595047 AMTP48728 403 aa12.51□□□□□ -0.41
GTF2F1-205ENST00000595047 TSHBP01222 138 aa12.5□□□□□ -0.41
GTF2F1-205ENST00000595047 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
GTF2F1-205ENST00000595047 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
GTF2F1-205ENST00000595047 Q8N8P6 123 aa12.49□□□□□ -0.41
GTF2F1-205ENST00000595047 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms