RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RPL36AP83881 106 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-203ENST00000594298 LELP1Q5T871 98 aa11.82□□□□□ -0.52
SHKBP1-203ENST00000594298 LYZL1Q6UWQ5 148 aa11.82□□□□□ -0.52
SHKBP1-203ENST00000594298 RPL36ALQ969Q0 106 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-203ENST00000594298 A0A087WWC5 75 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 A8MWL6 223 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 TRGC1P0CF51 173 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 GCSHP23434 173 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 OR10J3Q5JRS4 329 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 LINC01551Q86U37 167 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 C10orf126Q8N4M7 172 aa11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-203ENST00000594298 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
SHKBP1-203ENST00000594298 CT83Q5H943 113 aa11.8□□□□□ -0.52
SHKBP1-203ENST00000594298 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
SHKBP1-203ENST00000594298 IGHV3-38A0A0C4DH36 116 aa11.79□□□□□ -0.52
SHKBP1-203ENST00000594298 NTF3P20783 257 aa11.79□□□□□ -0.52
SHKBP1-203ENST00000594298 CTRLP40313 264 aa11.79□□□□□ -0.52
SHKBP1-203ENST00000594298 OSTCQ9NRP0 149 aa11.79□□□□□ -0.52
SHKBP1-203ENST00000594298 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
SHKBP1-203ENST00000594298 H7C1H1 209 aa11.78□□□□□ -0.52
SHKBP1-203ENST00000594298 TWIST1Q15672 202 aa11.78□□□□□ -0.52
SHKBP1-203ENST00000594298 C15orf54Q8N8G6 183 aa11.78□□□□□ -0.52
SHKBP1-203ENST00000594298 OR10G8Q8NGN5 311 aa11.78□□□□□ -0.52
SHKBP1-203ENST00000594298 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
SHKBP1-203ENST00000594298 BORCS7Q96B45 105 aa11.77□□□□□ -0.53
SHKBP1-203ENST00000594298 CNFNQ9BYD5 112 aa11.77□□□□□ -0.53
SHKBP1-203ENST00000594298 DPH3P1Q9H4G8 78 aa11.77□□□□□ -0.53
SHKBP1-203ENST00000594298 Q9UF83 564 aa11.77□□□□□ -0.53
SHKBP1-203ENST00000594298 NAT8Q9UHE5 227 aa11.77□□□□□ -0.53
SHKBP1-203ENST00000594298 LRCOL1A6NCL2 159 aa11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 MGPP08493 103 aa11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 FOXA3P55318 350 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 UBE2D3P61077 147 aa11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 UBE2D2P62837 147 aa11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 LINC01556Q5JQF7 62 aa11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 NTN5Q8WTR8 489 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
SHKBP1-203ENST00000594298 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 C9JQL5 133 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 NEXN-AS1Q8NBZ9 246 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 GTSF1Q8WW33 167 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 DNAJC30Q96LL9 226 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 TMEM70Q9BUB7 260 aa11.75□□□□□ -0.53
SHKBP1-203ENST00000594298 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 FAM229AH3BQW9 127 aa11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 ADIRFQ15847 76 aa11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
SHKBP1-203ENST00000594298 IGLV5-52A0A0A0MRZ9 124 aa11.73□□□□□ -0.53
SHKBP1-203ENST00000594298 IBA57-AS1B1ANH7 110 aa11.73□□□□□ -0.53
SHKBP1-203ENST00000594298 TMEM97Q5BJF2 176 aa11.73□□□□□ -0.53
SHKBP1-203ENST00000594298 PGLYRP4Q96LB8 373 aa11.73□□□□□ -0.53
SHKBP1-203ENST00000594298 MYCBP2O75592 4640 aa11.72□□□□□ -0.53
SHKBP1-203ENST00000594298 PSCAO43653 123 aa11.72□□□□□ -0.53
SHKBP1-203ENST00000594298 CLLU1Q5K131 121 aa11.72□□□□□ -0.53
SHKBP1-203ENST00000594298 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
SHKBP1-203ENST00000594298 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-203ENST00000594298 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-203ENST00000594298 HIGD1CA8MV81 97 aa11.71□□□□□ -0.53
SHKBP1-203ENST00000594298 M0QY20 66 aa11.71□□□□□ -0.53
SHKBP1-203ENST00000594298 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
SHKBP1-203ENST00000594298 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
SHKBP1-203ENST00000594298 Q8N814 137 aa11.71□□□□□ -0.53
SHKBP1-203ENST00000594298 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
SHKBP1-203ENST00000594298 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
SHKBP1-203ENST00000594298 IGHV3-30P01768 117 aa11.7□□□□□ -0.54
SHKBP1-203ENST00000594298 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
SHKBP1-203ENST00000594298 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
SHKBP1-203ENST00000594298 IGHV3-30-5P0DP03 117 aa11.7□□□□□ -0.54
SHKBP1-203ENST00000594298 V9GYV3 84 aa11.7□□□□□ -0.54
SHKBP1-203ENST00000594298 HAMPP81172 84 aa11.69□□□□□ -0.54
SHKBP1-203ENST00000594298 NIT2Q9NQR4 276 aa11.69□□□□□ -0.54
SHKBP1-203ENST00000594298 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
SHKBP1-203ENST00000594298 PKIAP61925 76 aa11.68□□□□□ -0.54
SHKBP1-203ENST00000594298 RIGQ13278 110 aa11.68□□□□□ -0.54
SHKBP1-203ENST00000594298 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
SHKBP1-203ENST00000594298 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
SHKBP1-203ENST00000594298 A0A087WX48 190 aa11.67□□□□□ -0.54
SHKBP1-203ENST00000594298 LAGE3Q14657 143 aa11.67□□□□□ -0.54
SHKBP1-203ENST00000594298 ELOBQ15370 118 aa11.67□□□□□ -0.54
SHKBP1-203ENST00000594298 NIT1Q86X76 327 aa11.67□□□□□ -0.54
SHKBP1-203ENST00000594298 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
SHKBP1-203ENST00000594298 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
SHKBP1-203ENST00000594298 IFITM2Q01629 132 aa11.65□□□□□ -0.54
SHKBP1-203ENST00000594298 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
SHKBP1-203ENST00000594298 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
SHKBP1-203ENST00000594298 Q9HAA7 133 aa11.65□□□□□ -0.54
SHKBP1-203ENST00000594298 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
SHKBP1-203ENST00000594298 SMIM27A0A1W2PRY6 76 aa11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 PPP1R2P9O14990 202 aa11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 PNRC1Q12796 327 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 GATD1Q8NB37 220 aa11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms