RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 G3V3Q6 166 aa14.66□□□□□ -0.06
SSBP4-203ENST00000593641 SNAI2O43623 268 aa14.66□□□□□ -0.06
SSBP4-203ENST00000593641 SMIM17P0DL12 118 aa14.66□□□□□ -0.06
SSBP4-203ENST00000593641 BAGE2Q86Y30 109 aa14.66□□□□□ -0.06
SSBP4-203ENST00000593641 MUC21A0A0G2JKD1 596 aa14.65□□□□□ -0.06
SSBP4-203ENST00000593641 MUC21A0A140T8X8 626 aa14.65□□□□□ -0.06
SSBP4-203ENST00000593641 SCO2A0A1W2PP80 73 aa14.65□□□□□ -0.06
SSBP4-203ENST00000593641 OR5AL1P0C617 328 aa14.65□□□□□ -0.06
SSBP4-203ENST00000593641 DGAT2L7PQ6IED9 249 aa14.65□□□□□ -0.06
SSBP4-203ENST00000593641 SFT2D1Q8WV19 159 aa14.65□□□□□ -0.06
SSBP4-203ENST00000593641 SSBP4Q9BWG4 385 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-203ENST00000593641 TRBV25-1A0A075B6N4 114 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 SSTP61278 116 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 CLPSL2Q6UWE3 100 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 AP1S3Q96PC3 154 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 DERL1Q9BUN8 251 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 MLST8Q9BVC4 326 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 VAX2Q9UIW0 290 aa14.64□□□□□ -0.07
SSBP4-203ENST00000593641 A0A1B0GV50 99 aa14.63□□□□□ -0.07
SSBP4-203ENST00000593641 PRSS1P07477 247 aa14.63□□□□□ -0.07
SSBP4-203ENST00000593641 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
SSBP4-203ENST00000593641 FAM213BQ8TBF2 198 aa14.63□□□□□ -0.07
SSBP4-203ENST00000593641 PRR34Q9NV39 138 aa14.63□□□□□ -0.07
SSBP4-203ENST00000593641 UBR4Q5T4S7 5183 aa14.62□□□□□ -0.07
SSBP4-203ENST00000593641 RBX1P62877 108 aa14.62□□□□□ -0.07
SSBP4-203ENST00000593641 GAGE6Q13070 117 aa14.62□□□□□ -0.07
SSBP4-203ENST00000593641 C9orf163Q8N9P6 203 aa14.62□□□□□ -0.07
SSBP4-203ENST00000593641 UMAD1C9J7I0 102 aa14.61□□□□□ -0.07
SSBP4-203ENST00000593641 LINC00269Q8N2A0 174 aa14.61□□□□□ -0.07
SSBP4-203ENST00000593641 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
SSBP4-203ENST00000593641 PLA2G2DQ9UNK4 145 aa14.61□□□□□ -0.07
SSBP4-203ENST00000593641 IGHV1-24A0A0C4DH33 117 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 ZNF345Q14585 488 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 IQCJQ1A5X6 159 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 TMUB2Q71RG4 321 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 KCNRGQ8N5I3 272 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 CLRN3Q8NCR9 226 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 KIF25-AS1Q9Y6Z4 181 aa14.58□□□□□ -0.08
SSBP4-203ENST00000593641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.58□□□□□ -0.08
SSBP4-203ENST00000593641 MGPP08493 103 aa14.57□□□□□ -0.08
SSBP4-203ENST00000593641 SMLR1H3BR10 107 aa14.56□□□□□ -0.08
SSBP4-203ENST00000593641 H7C1H1 209 aa14.56□□□□□ -0.08
SSBP4-203ENST00000593641 REG3AQ06141 175 aa14.56□□□□□ -0.08
SSBP4-203ENST00000593641 KRTAP26-1Q6PEX3 210 aa14.56□□□□□ -0.08
SSBP4-203ENST00000593641 DAZAP1Q96EP5 407 aaKnown RBP14.56□□□□□ -0.08
SSBP4-203ENST00000593641 TPPP3Q9BW30 176 aa14.56□□□□□ -0.08
SSBP4-203ENST00000593641 H2AFB1P0C5Y9 115 aa14.55□□□□□ -0.08
SSBP4-203ENST00000593641 RPL35P42766 123 aaKnown RBP14.55□□□□□ -0.08
SSBP4-203ENST00000593641 HNRNPA3P51991 378 aaKnown RBP14.55□□□□□ -0.08
SSBP4-203ENST00000593641 IGLV10-54A0A075B6I4 117 aa14.54□□□□□ -0.08
SSBP4-203ENST00000593641 RGS21Q2M5E4 152 aa14.54□□□□□ -0.08
SSBP4-203ENST00000593641 hDV102S1A0JD36 115 aa14.53□□□□□ -0.08
SSBP4-203ENST00000593641 M0QY20 66 aa14.53□□□□□ -0.08
SSBP4-203ENST00000593641 SDIM1Q6ZPB5 146 aa14.53□□□□□ -0.08
SSBP4-203ENST00000593641 FER1L6-AS1Q8NA97 138 aa14.53□□□□□ -0.08
SSBP4-203ENST00000593641 TRAV8-4A0A0B4J246 113 aa14.52□□□□□ -0.09
SSBP4-203ENST00000593641 A0A0D9SG52 128 aa14.52□□□□□ -0.09
SSBP4-203ENST00000593641 KANTRA0A1W2PQU2 76 aa14.52□□□□□ -0.09
SSBP4-203ENST00000593641 PANO1I0J062 215 aa14.52□□□□□ -0.09
SSBP4-203ENST00000593641 P01737 135 aa14.52□□□□□ -0.09
SSBP4-203ENST00000593641 CNBPP62633 177 aaKnown RBP14.52□□□□□ -0.09
SSBP4-203ENST00000593641 SUMO4Q6EEV6 95 aa14.52□□□□□ -0.09
SSBP4-203ENST00000593641 GZMBP10144 247 aa14.51□□□□□ -0.09
SSBP4-203ENST00000593641 RPS20P60866 119 aaKnown RBP14.51□□□□□ -0.09
SSBP4-203ENST00000593641 CACNG7P62955 275 aa14.51□□□□□ -0.09
SSBP4-203ENST00000593641 C20orf203Q8NBC4 194 aa14.51□□□□□ -0.09
SSBP4-203ENST00000593641 TMEM243Q9BU79 118 aa14.51□□□□□ -0.09
SSBP4-203ENST00000593641 MANBALQ9NQG1 85 aa14.51□□□□□ -0.09
SSBP4-203ENST00000593641 AP5S1Q9NUS5 200 aa14.51□□□□□ -0.09
SSBP4-203ENST00000593641 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.5□□□□□ -0.09
SSBP4-203ENST00000593641 BCL2L11O43521 198 aa14.5□□□□□ -0.09
SSBP4-203ENST00000593641 IGLC6P0CF74 106 aa14.5□□□□□ -0.09
SSBP4-203ENST00000593641 NKX2-5P52952 324 aaPredicted RBP14.5□□□□□ -0.09
SSBP4-203ENST00000593641 EIF5AP63241 154 aaKnown RBP14.5□□□□□ -0.09
SSBP4-203ENST00000593641 CENPWQ5EE01 88 aa14.5□□□□□ -0.09
SSBP4-203ENST00000593641 OR2D3Q8NGH3 330 aa14.5□□□□□ -0.09
SSBP4-203ENST00000593641 C11orf52Q96A22 123 aa14.49□□□□□ -0.09
SSBP4-203ENST00000593641 GNG13Q9P2W3 67 aa14.49□□□□□ -0.09
SSBP4-203ENST00000593641 IGHV3-64A0A075B6Q5 118 aa14.48□□□□□ -0.09
SSBP4-203ENST00000593641 A0A1B0GUV1 79 aa14.48□□□□□ -0.09
SSBP4-203ENST00000593641 XKRY2A2RUG3 117 aa14.48□□□□□ -0.09
SSBP4-203ENST00000593641 HMSDA8MTL9 139 aa14.48□□□□□ -0.09
SSBP4-203ENST00000593641 RASL11AQ6T310 242 aa14.48□□□□□ -0.09
SSBP4-203ENST00000593641 DPH3Q96FX2 82 aa14.48□□□□□ -0.09
SSBP4-203ENST00000593641 UBE2L6O14933 153 aa14.47□□□□□ -0.09
SSBP4-203ENST00000593641 TRGC1P0CF51 173 aa14.47□□□□□ -0.09
SSBP4-203ENST00000593641 CIRBPQ14011 172 aaKnown RBP14.47□□□□□ -0.09
SSBP4-203ENST00000593641 WDR73Q6P4I2 378 aa14.47□□□□□ -0.09
SSBP4-203ENST00000593641 IGLV4-60A0A075B6I1 120 aa14.46□□□□□ -0.09
SSBP4-203ENST00000593641 F2Z2F3 143 aa14.46□□□□□ -0.09
SSBP4-203ENST00000593641 Q6ZRU5 148 aa14.46□□□□□ -0.09
SSBP4-203ENST00000593641 PGLYRP4Q96LB8 373 aa14.46□□□□□ -0.09
SSBP4-203ENST00000593641 RAB5CP51148 216 aa14.45□□□□□ -0.1
SSBP4-203ENST00000593641 SMIM12Q96EX1 92 aa14.45□□□□□ -0.1
SSBP4-203ENST00000593641 RNF185Q96GF1 192 aa14.45□□□□□ -0.1
SSBP4-203ENST00000593641 C19orf71A6NCJ1 209 aa14.44□□□□□ -0.1
SSBP4-203ENST00000593641 GNG4P50150 75 aa14.44□□□□□ -0.1
SSBP4-203ENST00000593641 GFRA4Q9GZZ7 299 aa14.44□□□□□ -0.1
SSBP4-203ENST00000593641 DPH3P1Q9H4G8 78 aa14.44□□□□□ -0.1
SSBP4-203ENST00000593641 NIT2Q9NQR4 276 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms