RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 RHODO00212 210 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 TCAPO15273 167 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 IGHV3-53P01767 116 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 P0DMU3 169 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 FAM231AP0DMU4 169 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 FAM231CP0DMU5 169 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 EMP1P54849 157 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
APOC1-205ENST00000589781 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
APOC1-205ENST00000589781 GAGE12BA1L429 117 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 LINC01546A6NGU7 62 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 GAGE7O76087 117 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 HBDP02042 147 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 GAGE12FP0CL80 117 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 GAGE12GP0CL81 117 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 GAGE12IP0CL82 117 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 DAZ2Q13117 558 aaKnown RBP7.27□□□□□ -1.25
APOC1-205ENST00000589781 Q6ZSN1 163 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 SPATA12Q7Z6I5 190 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 DEFB104AQ8WTQ1 72 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 ZNF479Q96JC4 524 aa7.27□□□□□ -1.25
APOC1-205ENST00000589781 TRAV4A0A0B4J268 109 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 LEPROTL1O95214 131 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 SCGB1D1O95968 90 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 PPP1R17O96001 155 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 NHLRC4P0CG21 123 aaPredicted RBP7.26□□□□□ -1.25
APOC1-205ENST00000589781 Q8N976 141 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 OR4C5Q8NGB2 326 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 NDUFAF3Q9BU61 184 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 TMEM70Q9BUB7 260 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 EDA2RQ9HAV5 297 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 RETNQ9HD89 108 aa7.26□□□□□ -1.25
APOC1-205ENST00000589781 KMT2CQ8NEZ4 4911 aaKnown RBP7.25□□□□□ -1.25
APOC1-205ENST00000589781 TRBV6-5A0A0K0K1A5 114 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 FCER1GP30273 86 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
APOC1-205ENST00000589781 LAGE3Q14657 143 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 OR11H2Q8NH07 326 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 OVOL2Q9BRP0 275 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 NIT2Q9NQR4 276 aa7.25□□□□□ -1.25
APOC1-205ENST00000589781 TRGV2A0A075B6R0 118 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 IGHV4-28A0A0C4DH34 117 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 SMIM9A6NGZ8 99 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 H0Y8G0 127 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 H7C1H1 209 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 DEFB4AO15263 64 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 BTF3P20290 206 aaKnown RBP7.24□□□□□ -1.25
APOC1-205ENST00000589781 POLR2KP53803 58 aaKnown RBP7.24□□□□□ -1.25
APOC1-205ENST00000589781 ZFP2Q6ZN57 461 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 NEXN-AS1Q8NBZ9 246 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 WWC2-AS2Q96NR7 200 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
APOC1-205ENST00000589781 K7EQD1 137 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 NUDT3O95989 172 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 ORMDL2Q53FV1 153 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 Q8NAQ8 132 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 RNF183Q96D59 192 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 C18orf15Q96N68 181 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 Q9UF83 564 aa7.23□□□□□ -1.25
APOC1-205ENST00000589781 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 SYS1-DBNDD2H3BUS1 97 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 TSHBP01222 138 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 DEFB130BP0DP73 79 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 DEFB130AP0DP74 79 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 FAM222AQ5U5X8 452 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 LINC00612Q8N6U2 182 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 MAP1LC3CQ9BXW4 147 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 CELA1Q9UNI1 258 aa7.22□□□□□ -1.25
APOC1-205ENST00000589781 NBEAL2Q6ZNJ1 2754 aa7.21□□□□□ -1.25
APOC1-205ENST00000589781 VCYO14598 125 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 MIFP14174 115 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 PHLDA1Q8WV24 401 aaPredicted RBP7.21□□□□□ -1.26
APOC1-205ENST00000589781 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 KIR2DL4Q99706 377 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 PMCHL2Q9BQD1 86 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 TNFRSF18Q9Y5U5 241 aa7.21□□□□□ -1.26
APOC1-205ENST00000589781 DNAH7Q8WXX0 4024 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 TRGV4A0A0C4DH28 118 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 IGHV3-38A0A0C4DH36 116 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 LOC100131303A0A0U1RQF7 123 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 C20orf202A1L168 122 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 GAGE12JA6NER3 117 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 GAGE1Q13065 139 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 GAGE4Q13068 117 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 GAGE5Q13069 117 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 RHOHQ15669 191 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 TEX43Q6ZNM6 134 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
APOC1-205ENST00000589781 RYR3Q15413 4870 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms