RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 GAGE6Q13070 117 aa10.86□□□□□ -0.67
LINC01842-201ENST00000588275 CYTL1Q9NRR1 136 aa10.86□□□□□ -0.67
LINC01842-201ENST00000588275 UBR4Q5T4S7 5183 aa10.86□□□□□ -0.67
LINC01842-201ENST00000588275 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
LINC01842-201ENST00000588275 SMIM17P0DL12 118 aa10.85□□□□□ -0.67
LINC01842-201ENST00000588275 DERL1Q9BUN8 251 aa10.85□□□□□ -0.67
LINC01842-201ENST00000588275 PFDN1O60925 122 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 HNRNPA3P51991 378 aaKnown RBP10.84□□□□□ -0.67
LINC01842-201ENST00000588275 RBX1P62877 108 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 LINC00269Q8N2A0 174 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
LINC01842-201ENST00000588275 TRBV25-1A0A075B6N4 114 aa10.83□□□□□ -0.68
LINC01842-201ENST00000588275 G3V3Q6 166 aa10.83□□□□□ -0.68
LINC01842-201ENST00000588275 SNAI2O43623 268 aa10.83□□□□□ -0.68
LINC01842-201ENST00000588275 S100A9P06702 114 aaKnown RBP10.83□□□□□ -0.68
LINC01842-201ENST00000588275 CXCL1P09341 107 aa10.83□□□□□ -0.68
LINC01842-201ENST00000588275 TMEM97Q5BJF2 176 aa10.83□□□□□ -0.68
LINC01842-201ENST00000588275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.83□□□□□ -0.68
LINC01842-201ENST00000588275 IGLV10-54A0A075B6I4 117 aa10.82□□□□□ -0.68
LINC01842-201ENST00000588275 MGPP08493 103 aa10.82□□□□□ -0.68
LINC01842-201ENST00000588275 OR5AL1P0C617 328 aa10.82□□□□□ -0.68
LINC01842-201ENST00000588275 DGAT2L7PQ6IED9 249 aa10.82□□□□□ -0.68
LINC01842-201ENST00000588275 C9orf163Q8N9P6 203 aa10.82□□□□□ -0.68
LINC01842-201ENST00000588275 DAZAP1Q96EP5 407 aaKnown RBP10.82□□□□□ -0.68
LINC01842-201ENST00000588275 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
LINC01842-201ENST00000588275 SMLR1H3BR10 107 aa10.81□□□□□ -0.68
LINC01842-201ENST00000588275 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
LINC01842-201ENST00000588275 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
LINC01842-201ENST00000588275 VAX2Q9UIW0 290 aa10.81□□□□□ -0.68
LINC01842-201ENST00000588275 PANO1I0J062 215 aa10.8□□□□□ -0.68
LINC01842-201ENST00000588275 MLST8Q9BVC4 326 aa10.8□□□□□ -0.68
LINC01842-201ENST00000588275 PRR34Q9NV39 138 aa10.8□□□□□ -0.68
LINC01842-201ENST00000588275 IGHV1-24A0A0C4DH33 117 aa10.79□□□□□ -0.68
LINC01842-201ENST00000588275 REG3AQ06141 175 aa10.79□□□□□ -0.68
LINC01842-201ENST00000588275 hDV102S1A0JD36 115 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 GZMBP10144 247 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 KRTAP26-1Q6PEX3 210 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 KCNRGQ8N5I3 272 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 BATF3Q9NR55 127 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 KIF25-AS1Q9Y6Z4 181 aa10.78□□□□□ -0.68
LINC01842-201ENST00000588275 IQCJQ1A5X6 159 aa10.77□□□□□ -0.69
LINC01842-201ENST00000588275 TMUB2Q71RG4 321 aa10.77□□□□□ -0.69
LINC01842-201ENST00000588275 DPH3Q96FX2 82 aa10.77□□□□□ -0.69
LINC01842-201ENST00000588275 UMAD1C9J7I0 102 aa10.76□□□□□ -0.69
LINC01842-201ENST00000588275 H7C1H1 209 aa10.76□□□□□ -0.69
LINC01842-201ENST00000588275 RPL35P42766 123 aaKnown RBP10.76□□□□□ -0.69
LINC01842-201ENST00000588275 RAB5CP51148 216 aa10.76□□□□□ -0.69
LINC01842-201ENST00000588275 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
LINC01842-201ENST00000588275 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
LINC01842-201ENST00000588275 CLRN3Q8NCR9 226 aa10.76□□□□□ -0.69
LINC01842-201ENST00000588275 A0A0D9SG52 128 aa10.75□□□□□ -0.69
LINC01842-201ENST00000588275 M0QY20 66 aa10.75□□□□□ -0.69
LINC01842-201ENST00000588275 H2AFB1P0C5Y9 115 aa10.75□□□□□ -0.69
LINC01842-201ENST00000588275 NKX2-5P52952 324 aaPredicted RBP10.75□□□□□ -0.69
LINC01842-201ENST00000588275 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
LINC01842-201ENST00000588275 C20orf203Q8NBC4 194 aa10.75□□□□□ -0.69
LINC01842-201ENST00000588275 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
LINC01842-201ENST00000588275 OR2D3Q8NGH3 330 aa10.74□□□□□ -0.69
LINC01842-201ENST00000588275 TMEM243Q9BU79 118 aa10.74□□□□□ -0.69
LINC01842-201ENST00000588275 IGLV4-60A0A075B6I1 120 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 IGHV3-64A0A075B6Q5 118 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 KANTRA0A1W2PQU2 76 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 CHTF8P0CG12 524 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 CNBPP62633 177 aaKnown RBP10.73□□□□□ -0.69
LINC01842-201ENST00000588275 ZNF345Q14585 488 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 CENPWQ5EE01 88 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 GNG13Q9P2W3 67 aa10.73□□□□□ -0.69
LINC01842-201ENST00000588275 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
LINC01842-201ENST00000588275 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
LINC01842-201ENST00000588275 UBE2L6O14933 153 aa10.72□□□□□ -0.69
LINC01842-201ENST00000588275 P01737 135 aa10.72□□□□□ -0.69
LINC01842-201ENST00000588275 IGLC6P0CF74 106 aa10.72□□□□□ -0.69
LINC01842-201ENST00000588275 RGS21Q2M5E4 152 aa10.72□□□□□ -0.69
LINC01842-201ENST00000588275 BCL2L11O43521 198 aa10.71□□□□□ -0.69
LINC01842-201ENST00000588275 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
LINC01842-201ENST00000588275 CACNG7P62955 275 aa10.71□□□□□ -0.69
LINC01842-201ENST00000588275 WDR73Q6P4I2 378 aa10.71□□□□□ -0.69
LINC01842-201ENST00000588275 RASL11AQ6T310 242 aa10.71□□□□□ -0.69
LINC01842-201ENST00000588275 MANBALQ9NQG1 85 aa10.71□□□□□ -0.69
LINC01842-201ENST00000588275 A0A087WYN8 130 aa10.7□□□□□ -0.7
LINC01842-201ENST00000588275 IGKV3OR2-268A0A0C4DH90 116 aa10.7□□□□□ -0.7
LINC01842-201ENST00000588275 SULT1A2P50226 295 aa10.7□□□□□ -0.7
LINC01842-201ENST00000588275 Q6ZRU5 148 aa10.7□□□□□ -0.7
LINC01842-201ENST00000588275 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 SLPIP03973 132 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 TRGC1P0CF51 173 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 AMTP48728 403 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 CCL20P78556 96 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 CIRBPQ14011 172 aaKnown RBP10.69□□□□□ -0.7
LINC01842-201ENST00000588275 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
LINC01842-201ENST00000588275 XKRY2A2RUG3 117 aa10.68□□□□□ -0.7
LINC01842-201ENST00000588275 RAB19A4D1S5 217 aa10.68□□□□□ -0.7
LINC01842-201ENST00000588275 GNG4P50150 75 aa10.68□□□□□ -0.7
LINC01842-201ENST00000588275 EIF5AP63241 154 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms